RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 NISCHQ9Y2I1 1504 aa44.05■■■■■ 4.64
SBDSP1-202ENST00000423945 CCDC180Q9P1Z9 1646 aa39.29■■■■□ 3.88
SBDSP1-202ENST00000423945 ABCC9O60706 1549 aa38.7■■■■□ 3.79
SBDSP1-202ENST00000423945 RB1CC1Q8TDY2 1594 aa37.07■■■■□ 3.52
SBDSP1-202ENST00000423945 NACADO15069 1562 aa36.96■■■■□ 3.51
SBDSP1-202ENST00000423945 DCAF8L2P0C7V8 631 aa36.8■■■■□ 3.48
SBDSP1-202ENST00000423945 MYO15BQ96JP2 1530 aa36.67■■■■□ 3.46
SBDSP1-202ENST00000423945 ZCCHC6Q5VYS8 1495 aaKnown RBP36.65■■■■□ 3.46
SBDSP1-202ENST00000423945 DCAF1Q9Y4B6 1507 aa36.42■■■■□ 3.42
SBDSP1-202ENST00000423945 UNC13AQ9UPW8 1703 aa36.37■■■■□ 3.41
SBDSP1-202ENST00000423945 PABPN1Q86U42 306 aaKnown RBP eCLIP36.1■■■■□ 3.37
SBDSP1-202ENST00000423945 BICRAQ9NZM4 1560 aa36.07■■■■□ 3.37
SBDSP1-202ENST00000423945 DNAJC5BQ9UF47 199 aa35.84■■■■□ 3.33
SBDSP1-202ENST00000423945 SCRIBQ14160 1630 aa35.83■■■■□ 3.33
SBDSP1-202ENST00000423945 SHROOM4Q9ULL8 1493 aa35.54■■■■□ 3.28
SBDSP1-202ENST00000423945 EIF4G1Q04637 1599 aaKnown RBP35.08■■■■□ 3.21
SBDSP1-202ENST00000423945 CC2D2AQ9P2K1 1620 aa35.02■■■■□ 3.2
SBDSP1-202ENST00000423945 CECR2Q9BXF3 1484 aa34.78■■■■□ 3.16
SBDSP1-202ENST00000423945 SMARCA4P51532 1647 aa34.26■■■■□ 3.07
SBDSP1-202ENST00000423945 BAZ1AQ9NRL2 1556 aaPredicted RBP34.13■■■■□ 3.05
SBDSP1-202ENST00000423945 NCAPD3P42695 1498 aa34.13■■■■□ 3.05
SBDSP1-202ENST00000423945 ATAD2BQ9ULI0 1458 aa34.13■■■■□ 3.05
SBDSP1-202ENST00000423945 SMARCA2P51531 1590 aa34.02■■■■□ 3.04
SBDSP1-202ENST00000423945 MROH2BQ7Z745 1585 aa33.98■■■■□ 3.03
SBDSP1-202ENST00000423945 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
SBDSP1-202ENST00000423945 PEG3Q9GZU2 1588 aa33.93■■■■□ 3.02
SBDSP1-202ENST00000423945 BAZ1BQ9UIG0 1483 aaKnown RBP33.79■■■■□ 3
SBDSP1-202ENST00000423945 WIZO95785 1651 aa33.61■■■□□ 2.97
SBDSP1-202ENST00000423945 RSF1Q96T23 1441 aaPredicted RBP33.46■■■□□ 2.95
SBDSP1-202ENST00000423945 NESP48681 1621 aa33.46■■■□□ 2.95
SBDSP1-202ENST00000423945 ERCC6Q03468 1493 aa33.3■■■□□ 2.92
SBDSP1-202ENST00000423945 LAMC3Q9Y6N6 1575 aa33.26■■■□□ 2.92
SBDSP1-202ENST00000423945 TOP2AP11388 1531 aaKnown RBP33.19■■■□□ 2.9
SBDSP1-202ENST00000423945 CADPSQ9ULU8 1353 aa33.1■■■□□ 2.89
SBDSP1-202ENST00000423945 CUX2O14529 1486 aa33.08■■■□□ 2.89
SBDSP1-202ENST00000423945 KIF21AQ7Z4S6 1674 aa33.06■■■□□ 2.88
SBDSP1-202ENST00000423945 THOC2Q8NI27 1593 aaKnown RBP33.01■■■□□ 2.88
SBDSP1-202ENST00000423945 PDS5BQ9NTI5 1447 aa33■■■□□ 2.87
SBDSP1-202ENST00000423945 CFTRP13569 1480 aa32.87■■■□□ 2.85
SBDSP1-202ENST00000423945 DNAJC5Q9H3Z4 198 aa32.85■■■□□ 2.85
SBDSP1-202ENST00000423945 CCDC88BA6NC98 1476 aa32.81■■■□□ 2.84
SBDSP1-202ENST00000423945 FANCD2Q9BXW9 1451 aa32.74■■■□□ 2.83
SBDSP1-202ENST00000423945 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
SBDSP1-202ENST00000423945 CEP164Q9UPV0 1460 aa32.7■■■□□ 2.83
SBDSP1-202ENST00000423945 WDR62O43379 1518 aa32.66■■■□□ 2.82
SBDSP1-202ENST00000423945 PRDM2Q13029 1718 aa32.64■■■□□ 2.82
SBDSP1-202ENST00000423945 URB2Q14146 1524 aaKnown RBP32.48■■■□□ 2.79
SBDSP1-202ENST00000423945 SUPT5HO00267 1087 aaKnown RBP32.34■■■□□ 2.77
SBDSP1-202ENST00000423945 TOPBP1Q92547 1522 aa32.21■■■□□ 2.75
SBDSP1-202ENST00000423945 DNMBPQ6XZF7 1577 aa32.13■■■□□ 2.73
SBDSP1-202ENST00000423945 ABCC8Q09428 1581 aa32.1■■■□□ 2.73
SBDSP1-202ENST00000423945 IFT140Q96RY7 1462 aa32.03■■■□□ 2.72
SBDSP1-202ENST00000423945 ZNF608Q9ULD9 1512 aaPredicted RBP31.98■■■□□ 2.71
SBDSP1-202ENST00000423945 POLA1P09884 1462 aaPredicted RBP31.91■■■□□ 2.7
SBDSP1-202ENST00000423945 TARBP1Q13395 1621 aaKnown RBP31.91■■■□□ 2.7
SBDSP1-202ENST00000423945 CUX1P39880 1505 aa31.89■■■□□ 2.7
SBDSP1-202ENST00000423945 EIF4G3O43432 1585 aaKnown RBP31.82■■■□□ 2.68
SBDSP1-202ENST00000423945 FGD5Q6ZNL6 1462 aa31.79■■■□□ 2.68
SBDSP1-202ENST00000423945 RAD54L2Q9Y4B4 1467 aa31.79■■■□□ 2.68
SBDSP1-202ENST00000423945 AQRO60306 1485 aaKnown RBP eCLIP31.73■■■□□ 2.67
SBDSP1-202ENST00000423945 SOGA1O94964 1423 aa31.73■■■□□ 2.67
SBDSP1-202ENST00000423945 OSCARQ8IYS5 282 aa31.62■■■□□ 2.65
SBDSP1-202ENST00000423945 TDRD9Q8NDG6 1382 aaKnown RBP31.61■■■□□ 2.65
SBDSP1-202ENST00000423945 WDR97A6NE52 1622 aa31.6■■■□□ 2.65
SBDSP1-202ENST00000423945 BIVM-ERCC5R4GMW8 1640 aa31.54■■■□□ 2.64
SBDSP1-202ENST00000423945 SYNJ1O43426 1573 aa31.53■■■□□ 2.64
SBDSP1-202ENST00000423945 TOP2BQ02880 1626 aa31.52■■■□□ 2.64
SBDSP1-202ENST00000423945 WRNQ14191 1432 aaPredicted RBP eCLIP31.51■■■□□ 2.64
SBDSP1-202ENST00000423945 CHD1O14646 1710 aa31.5■■■□□ 2.63
SBDSP1-202ENST00000423945 ABCA10Q8WWZ4 1543 aa31.46■■■□□ 2.63
SBDSP1-202ENST00000423945 SNAPC4Q5SXM2 1469 aa31.42■■■□□ 2.62
SBDSP1-202ENST00000423945 ABCA5Q8WWZ7 1642 aa31.4■■■□□ 2.62
SBDSP1-202ENST00000423945 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
SBDSP1-202ENST00000423945 PBRM1Q86U86 1689 aa31.38■■■□□ 2.61
SBDSP1-202ENST00000423945 GAPVD1Q14C86 1478 aa31.37■■■□□ 2.61
SBDSP1-202ENST00000423945 MAGI1Q96QZ7 1491 aaPredicted RBP31.34■■■□□ 2.61
SBDSP1-202ENST00000423945 FBLN2P98095 1184 aa31.31■■■□□ 2.6
SBDSP1-202ENST00000423945 TRIM41Q8WV44 630 aa31.31■■■□□ 2.6
SBDSP1-202ENST00000423945 RIMBP3CA6NJZ7 1639 aa31.25■■■□□ 2.59
SBDSP1-202ENST00000423945 RIMBP3BA6NNM3 1639 aa31.25■■■□□ 2.59
SBDSP1-202ENST00000423945 RIMBP3Q9UFD9 1639 aa31.25■■■□□ 2.59
SBDSP1-202ENST00000423945 SYNJ2O15056 1496 aa31.23■■■□□ 2.59
SBDSP1-202ENST00000423945 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
SBDSP1-202ENST00000423945 CHMP7Q8WUX9 453 aaPredicted RBP31.18■■■□□ 2.58
SBDSP1-202ENST00000423945 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.58
SBDSP1-202ENST00000423945 ADAMTS12P58397 1594 aa31.11■■■□□ 2.57
SBDSP1-202ENST00000423945 ERICH3Q5RHP9 1530 aa31.07■■■□□ 2.56
SBDSP1-202ENST00000423945 GRIN2AQ12879 1464 aa31.01■■■□□ 2.56
SBDSP1-202ENST00000423945 FHAD1B1AJZ9 1412 aa30.99■■■□□ 2.55
SBDSP1-202ENST00000423945 ARAP1Q96P48 1450 aa30.95■■■□□ 2.54
SBDSP1-202ENST00000423945 CEP170Q5SW79 1584 aa30.92■■■□□ 2.54
SBDSP1-202ENST00000423945 NUP160Q12769 1436 aa30.9■■■□□ 2.54
SBDSP1-202ENST00000423945 CYB5RLQ6IPT4 315 aa30.85■■■□□ 2.53
SBDSP1-202ENST00000423945 KIF27Q86VH2 1401 aa30.84■■■□□ 2.53
SBDSP1-202ENST00000423945 IGF1RP08069 1367 aa30.81■■■□□ 2.52
SBDSP1-202ENST00000423945 ERCC6L2Q5T890 1561 aa30.74■■■□□ 2.51
SBDSP1-202ENST00000423945 SHROOM2Q13796 1616 aa30.73■■■□□ 2.51
SBDSP1-202ENST00000423945 CUL7Q14999 1698 aa30.73■■■□□ 2.51
SBDSP1-202ENST00000423945 RUSC2Q8N2Y8 1516 aa30.66■■■□□ 2.5
SBDSP1-202ENST00000423945 CARMIL1Q5VZK9 1371 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms