RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 CARMIL1Q5VZK9 1371 aa11.88□□□□□ -0.51
SSB-205ENST00000422006 ILDR2Q71H61 639 aa11.87□□□□□ -0.51
SSB-205ENST00000422006 BRPF3Q9ULD4 1205 aa11.87□□□□□ -0.51
SSB-205ENST00000422006 TTC37Q6PGP7 1564 aa11.86□□□□□ -0.51
SSB-205ENST00000422006 YEATS2Q9ULM3 1422 aa11.86□□□□□ -0.51
SSB-205ENST00000422006 ZMYM4Q5VZL5 1548 aa11.85□□□□□ -0.51
SSB-205ENST00000422006 PREX1Q8TCU6 1659 aa11.85□□□□□ -0.51
SSB-205ENST00000422006 AKNAQ7Z591 1439 aa11.85□□□□□ -0.51
SSB-205ENST00000422006 EFCAB5A4FU69 1503 aa11.84□□□□□ -0.51
SSB-205ENST00000422006 RIMS1Q86UR5 1692 aaKnown RBP11.83□□□□□ -0.52
SSB-205ENST00000422006 FHOD3Q2V2M9 1422 aa11.82□□□□□ -0.52
SSB-205ENST00000422006 RRP9O43818 475 aaKnown RBP11.82□□□□□ -0.52
SSB-205ENST00000422006 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
SSB-205ENST00000422006 HSP90AA2PQ14568 343 aaPredicted RBP11.8□□□□□ -0.52
SSB-205ENST00000422006 RSPH4AQ5TD94 716 aa11.8□□□□□ -0.52
SSB-205ENST00000422006 FAM43AQ8N2R8 423 aa11.8□□□□□ -0.52
SSB-205ENST00000422006 FRMPD1Q5SYB0 1578 aa11.78□□□□□ -0.52
SSB-205ENST00000422006 RAPGEF2Q9Y4G8 1499 aa11.77□□□□□ -0.52
SSB-205ENST00000422006 DENND4BO75064 1496 aaPredicted RBP11.76□□□□□ -0.53
SSB-205ENST00000422006 USP35Q9P2H5 1018 aa11.76□□□□□ -0.53
SSB-205ENST00000422006 NAP1L2Q9ULW6 460 aaPredicted RBP11.76□□□□□ -0.53
SSB-205ENST00000422006 ARHGEF12Q9NZN5 1544 aa11.75□□□□□ -0.53
SSB-205ENST00000422006 NEFMP07197 916 aa11.75□□□□□ -0.53
SSB-205ENST00000422006 ZFYVE16Q7Z3T8 1539 aa11.74□□□□□ -0.53
SSB-205ENST00000422006 FER1L4A9Z1Z3 1794 aa11.73□□□□□ -0.53
SSB-205ENST00000422006 ARID3AQ99856 593 aa11.73□□□□□ -0.53
SSB-205ENST00000422006 PRDM4Q9UKN5 801 aa11.73□□□□□ -0.53
SSB-205ENST00000422006 CTTNBP2Q8WZ74 1663 aa11.72□□□□□ -0.53
SSB-205ENST00000422006 RICTORQ6R327 1708 aa11.72□□□□□ -0.53
SSB-205ENST00000422006 SPOCK2Q92563 424 aa11.72□□□□□ -0.53
SSB-205ENST00000422006 UHRF1BP1Q6BDS2 1440 aa11.72□□□□□ -0.53
SSB-205ENST00000422006 ZNF326Q5BKZ1 582 aaKnown RBP11.71□□□□□ -0.53
SSB-205ENST00000422006 IPO9Q96P70 1041 aaKnown RBP11.71□□□□□ -0.53
SSB-205ENST00000422006 LTBP4Q8N2S1 1624 aa11.71□□□□□ -0.53
SSB-205ENST00000422006 REREQ9P2R6 1566 aa11.71□□□□□ -0.53
SSB-205ENST00000422006 ARID4BQ4LE39 1312 aaPredicted RBP11.71□□□□□ -0.54
SSB-205ENST00000422006 BRD2P25440 801 aaKnown RBP11.7□□□□□ -0.54
SSB-205ENST00000422006 KCNH8Q96L42 1107 aa11.7□□□□□ -0.54
SSB-205ENST00000422006 NAP1L5Q96NT1 182 aaPredicted RBP11.69□□□□□ -0.54
SSB-205ENST00000422006 DHX37Q8IY37 1157 aaKnown RBP11.68□□□□□ -0.54
SSB-205ENST00000422006 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
SSB-205ENST00000422006 SETD1BQ9UPS6 1966 aaKnown RBP11.68□□□□□ -0.54
SSB-205ENST00000422006 STRCQ7RTU9 1775 aa11.68□□□□□ -0.54
SSB-205ENST00000422006 CHMP4AQ9BY43 222 aa11.68□□□□□ -0.54
SSB-205ENST00000422006 CALD1Q05682 793 aaKnown RBP11.67□□□□□ -0.54
SSB-205ENST00000422006 C9orf84Q5VXU9 1444 aa11.67□□□□□ -0.54
SSB-205ENST00000422006 CHMP4BQ9H444 224 aaKnown RBP11.67□□□□□ -0.54
SSB-205ENST00000422006 HSP90AA1P07900 732 aaKnown RBP11.66□□□□□ -0.54
SSB-205ENST00000422006 GTF2E1P29083 439 aaPredicted RBP11.66□□□□□ -0.54
SSB-205ENST00000422006 C1orf115Q9H7X2 142 aa11.66□□□□□ -0.54
SSB-205ENST00000422006 ATP10AO60312 1499 aa11.65□□□□□ -0.54
SSB-205ENST00000422006 ATP10BO94823 1461 aa11.65□□□□□ -0.54
SSB-205ENST00000422006 NKX1-1Q15270 411 aaPredicted RBP11.65□□□□□ -0.54
SSB-205ENST00000422006 IPO4Q8TEX9 1081 aaKnown RBP11.65□□□□□ -0.54
SSB-205ENST00000422006 ANP32AP39687 249 aaKnown RBP11.65□□□□□ -0.54
SSB-205ENST00000422006 CNTLNQ9NXG0 1405 aa11.65□□□□□ -0.54
SSB-205ENST00000422006 GSE1Q14687 1217 aa11.64□□□□□ -0.55
SSB-205ENST00000422006 AGLP35573 1532 aa11.63□□□□□ -0.55
SSB-205ENST00000422006 NEUROD2Q15784 382 aa11.63□□□□□ -0.55
SSB-205ENST00000422006 LMOD2Q6P5Q4 547 aa11.63□□□□□ -0.55
SSB-205ENST00000422006 NPATQ14207 1427 aa11.62□□□□□ -0.55
SSB-205ENST00000422006 RGS3P49796 1198 aa11.62□□□□□ -0.55
SSB-205ENST00000422006 NCOA1Q15788 1441 aa11.62□□□□□ -0.55
SSB-205ENST00000422006 CENPJQ9HC77 1338 aaPredicted RBP11.61□□□□□ -0.55
SSB-205ENST00000422006 HSPA2P54652 639 aa11.61□□□□□ -0.55
SSB-205ENST00000422006 PLA2R1Q13018 1463 aa11.6□□□□□ -0.55
SSB-205ENST00000422006 MED1Q15648 1581 aaPredicted RBP11.6□□□□□ -0.55
SSB-205ENST00000422006 RAPGEF6Q8TEU7 1601 aa11.59□□□□□ -0.55
SSB-205ENST00000422006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.59□□□□□ -0.55
SSB-205ENST00000422006 STAC3Q96MF2 364 aa11.59□□□□□ -0.55
SSB-205ENST00000422006 TRAPPC8Q9Y2L5 1435 aa11.59□□□□□ -0.55
SSB-205ENST00000422006 RAPGEF3O95398 923 aa11.58□□□□□ -0.56
SSB-205ENST00000422006 SPINK5Q9NQ38 1064 aaPredicted RBP11.58□□□□□ -0.56
SSB-205ENST00000422006 MROH2AA6NES4 1674 aa11.58□□□□□ -0.56
SSB-205ENST00000422006 POLA2Q14181 598 aa11.58□□□□□ -0.56
SSB-205ENST00000422006 CPS1P31327 1500 aa11.57□□□□□ -0.56
SSB-205ENST00000422006 CANXP27824 592 aaKnown RBP11.57□□□□□ -0.56
SSB-205ENST00000422006 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
SSB-205ENST00000422006 PPP4R2Q9NY27 417 aa11.57□□□□□ -0.56
SSB-205ENST00000422006 HECW1Q76N89 1606 aa11.56□□□□□ -0.56
SSB-205ENST00000422006 PPM1GO15355 546 aaPredicted RBP11.55□□□□□ -0.56
SSB-205ENST00000422006 RRAGDQ9NQL2 400 aaPredicted RBP11.55□□□□□ -0.56
SSB-205ENST00000422006 SAMD9Q5K651 1589 aa11.55□□□□□ -0.56
SSB-205ENST00000422006 FRAT1Q92837 279 aaPredicted RBP11.54□□□□□ -0.56
SSB-205ENST00000422006 LAS1LQ9Y4W2 734 aaKnown RBP11.54□□□□□ -0.56
SSB-205ENST00000422006 GTPBP6O43824 516 aaPredicted RBP11.53□□□□□ -0.56
SSB-205ENST00000422006 HS6ST3Q8IZP7 471 aa11.53□□□□□ -0.56
SSB-205ENST00000422006 ZNF142P52746 1687 aaPredicted RBP11.53□□□□□ -0.56
SSB-205ENST00000422006 ZFP91Q96JP5 570 aaPredicted RBP11.52□□□□□ -0.57
SSB-205ENST00000422006 PTPRKQ15262 1439 aa11.52□□□□□ -0.57
SSB-205ENST00000422006 ZNF518AQ6AHZ1 1483 aa11.52□□□□□ -0.57
SSB-205ENST00000422006 KDM5CP41229 1560 aa11.51□□□□□ -0.57
SSB-205ENST00000422006 IRX6P78412 446 aaPredicted RBP11.51□□□□□ -0.57
SSB-205ENST00000422006 DCAF11Q8TEB1 546 aa11.51□□□□□ -0.57
SSB-205ENST00000422006 ARID3CA6NKF2 412 aa11.51□□□□□ -0.57
SSB-205ENST00000422006 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
SSB-205ENST00000422006 PLCH2O75038 1416 aa11.5□□□□□ -0.57
SSB-205ENST00000422006 CNGB1Q14028 1251 aaPredicted RBP11.5□□□□□ -0.57
SSB-205ENST00000422006 RNF25Q96BH1 459 aaPredicted RBP11.5□□□□□ -0.57
SSB-205ENST00000422006 PLEKHD1A6NEE1 506 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms