RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 WASHC2CQ9Y4E1 1318 aa25.54■■□□□ 1.68
LINC00404-201ENST00000418660 CROCC2H7BZ55 1655 aa25.54■■□□□ 1.68
LINC00404-201ENST00000418660 DUOX2Q9NRD8 1548 aa25.53■■□□□ 1.68
LINC00404-201ENST00000418660 EIF2AK4Q9P2K8 1649 aaKnown RBP25.52■■□□□ 1.68
LINC00404-201ENST00000418660 RNF17Q9BXT8 1623 aaKnown RBP25.51■■□□□ 1.67
LINC00404-201ENST00000418660 KIF15Q9NS87 1388 aa25.5■■□□□ 1.67
LINC00404-201ENST00000418660 RRP7BPQ9NSQ0 103 aa25.49■■□□□ 1.67
LINC00404-201ENST00000418660 DMRT2Q9Y5R5 561 aa25.49■■□□□ 1.67
LINC00404-201ENST00000418660 STRCQ7RTU9 1775 aa25.47■■□□□ 1.67
LINC00404-201ENST00000418660 ILDR1Q86SU0 546 aaPredicted RBP25.47■■□□□ 1.67
LINC00404-201ENST00000418660 PZPP20742 1482 aa25.47■■□□□ 1.67
LINC00404-201ENST00000418660 MYO3AQ8NEV4 1616 aa25.46■■□□□ 1.67
LINC00404-201ENST00000418660 FAM50AQ14320 339 aaKnown RBP25.46■■□□□ 1.67
LINC00404-201ENST00000418660 ERBINQ96RT1 1412 aa25.46■■□□□ 1.67
LINC00404-201ENST00000418660 ANKRD30AQ9BXX3 1397 aa25.44■■□□□ 1.66
LINC00404-201ENST00000418660 FBXO31Q5XUX0 539 aaPredicted RBP25.44■■□□□ 1.66
LINC00404-201ENST00000418660 CHIC2Q9UKJ5 165 aa25.44■■□□□ 1.66
LINC00404-201ENST00000418660 ABCC3O15438 1527 aa25.42■■□□□ 1.66
LINC00404-201ENST00000418660 ZNF142P52746 1687 aaPredicted RBP25.42■■□□□ 1.66
LINC00404-201ENST00000418660 MROH1Q8NDA8 1641 aa25.42■■□□□ 1.66
LINC00404-201ENST00000418660 NCOA1Q15788 1441 aa25.42■■□□□ 1.66
LINC00404-201ENST00000418660 CEP170BQ9Y4F5 1589 aaPredicted RBP25.42■■□□□ 1.66
LINC00404-201ENST00000418660 ZC3H13Q5T200 1668 aaKnown RBP25.42■■□□□ 1.66
LINC00404-201ENST00000418660 TNRQ92752 1358 aa25.41■■□□□ 1.66
LINC00404-201ENST00000418660 CAMSAP1Q5T5Y3 1602 aa25.41■■□□□ 1.66
LINC00404-201ENST00000418660 PTPRTO14522 1441 aa25.4■■□□□ 1.66
LINC00404-201ENST00000418660 A2ML1A8K2U0 1454 aa25.38■■□□□ 1.65
LINC00404-201ENST00000418660 ADGRL2O95490 1459 aa25.38■■□□□ 1.65
LINC00404-201ENST00000418660 PRDM15P57071 1507 aaPredicted RBP25.36■■□□□ 1.65
LINC00404-201ENST00000418660 PPARGC1BQ86YN6 1023 aaKnown RBP25.35■■□□□ 1.65
LINC00404-201ENST00000418660 PLA2R1Q13018 1463 aa25.34■■□□□ 1.65
LINC00404-201ENST00000418660 FBXO41Q8TF61 875 aa25.33■■□□□ 1.65
LINC00404-201ENST00000418660 PKD2Q13563 968 aa25.32■■□□□ 1.64
LINC00404-201ENST00000418660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.32■■□□□ 1.64
LINC00404-201ENST00000418660 DEPDC5O75140 1603 aa25.32■■□□□ 1.64
LINC00404-201ENST00000418660 NCKAP5LQ9HCH0 1330 aa25.32■■□□□ 1.64
LINC00404-201ENST00000418660 CEP152O94986 1710 aa25.32■■□□□ 1.64
LINC00404-201ENST00000418660 NLRP1Q9C000 1473 aa25.31■■□□□ 1.64
LINC00404-201ENST00000418660 SPATA31D1Q6ZQQ2 1576 aa25.31■■□□□ 1.64
LINC00404-201ENST00000418660 KANK1Q14678 1352 aa25.31■■□□□ 1.64
LINC00404-201ENST00000418660 CERKQ8TCT0 537 aa25.3■■□□□ 1.64
LINC00404-201ENST00000418660 ERVK-7P63135 1459 aa25.28■■□□□ 1.64
LINC00404-201ENST00000418660 ARHGAP31Q2M1Z3 1444 aa25.28■■□□□ 1.64
LINC00404-201ENST00000418660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.64
LINC00404-201ENST00000418660 THEMISQ8N1K5 641 aaPredicted RBP25.25■■□□□ 1.63
LINC00404-201ENST00000418660 ANKRD50Q9ULJ7 1429 aa25.25■■□□□ 1.63
LINC00404-201ENST00000418660 VWDEQ8N2E2 1590 aa25.23■■□□□ 1.63
LINC00404-201ENST00000418660 UGGT1Q9NYU2 1555 aa25.23■■□□□ 1.63
LINC00404-201ENST00000418660 LMTK2Q8IWU2 1503 aa25.23■■□□□ 1.63
LINC00404-201ENST00000418660 ROCK1Q13464 1354 aa25.23■■□□□ 1.63
LINC00404-201ENST00000418660 ITGAEP38570 1179 aa25.18■■□□□ 1.62
LINC00404-201ENST00000418660 ANKLE2Q86XL3 938 aa25.18■■□□□ 1.62
LINC00404-201ENST00000418660 LTBP4Q8N2S1 1624 aa25.17■■□□□ 1.62
LINC00404-201ENST00000418660 CFAP65Q6ZU64 1925 aaKnown RBP25.16■■□□□ 1.62
LINC00404-201ENST00000418660 POLR1AO95602 1720 aaPredicted RBP25.15■■□□□ 1.62
LINC00404-201ENST00000418660 RRBP1Q9P2E9 1410 aaKnown RBP25.14■■□□□ 1.62
LINC00404-201ENST00000418660 EFCAB6Q5THR3 1501 aa25.13■■□□□ 1.61
LINC00404-201ENST00000418660 NEURL4Q96JN8 1562 aa25.13■■□□□ 1.61
LINC00404-201ENST00000418660 ZNF335Q9H4Z2 1342 aaPredicted RBP25.12■■□□□ 1.61
LINC00404-201ENST00000418660 UNC13BO14795 1591 aa25.1■■□□□ 1.61
LINC00404-201ENST00000418660 MED14O60244 1454 aa25.09■■□□□ 1.61
LINC00404-201ENST00000418660 UBR1Q8IWV7 1749 aa25.09■■□□□ 1.61
LINC00404-201ENST00000418660 NOS1P29475 1434 aa25.08■■□□□ 1.61
LINC00404-201ENST00000418660 RPRD2Q5VT52 1461 aaKnown RBP25.07■■□□□ 1.6
LINC00404-201ENST00000418660 NPHP4O75161 1426 aaPredicted RBP25.06■■□□□ 1.6
LINC00404-201ENST00000418660 IQSEC2Q5JU85 1478 aa25.06■■□□□ 1.6
LINC00404-201ENST00000418660 TET3O43151 1660 aa25.05■■□□□ 1.6
LINC00404-201ENST00000418660 IDI1Q13907 227 aa25.05■■□□□ 1.6
LINC00404-201ENST00000418660 PIK3C2BO00750 1634 aa25.04■■□□□ 1.6
LINC00404-201ENST00000418660 SYNMO15061 1565 aa25.04■■□□□ 1.6
LINC00404-201ENST00000418660 ARHGAP23Q9P227 1491 aa25.03■■□□□ 1.6
LINC00404-201ENST00000418660 SLIT1O75093 1534 aa25.02■■□□□ 1.6
LINC00404-201ENST00000418660 SLC52A1Q9NWF4 448 aa25.02■■□□□ 1.6
LINC00404-201ENST00000418660 STAG3Q9UJ98 1225 aa25.02■■□□□ 1.6
LINC00404-201ENST00000418660 GCC2Q8IWJ2 1684 aa25.01■■□□□ 1.59
LINC00404-201ENST00000418660 TXNDC2Q86VQ3 553 aa25■■□□□ 1.59
LINC00404-201ENST00000418660 NUP155O75694 1391 aa25■■□□□ 1.59
LINC00404-201ENST00000418660 SCAF11Q99590 1463 aaKnown RBP25■■□□□ 1.59
LINC00404-201ENST00000418660 IQGAP3Q86VI3 1631 aa25■■□□□ 1.59
LINC00404-201ENST00000418660 KDM5AP29375 1690 aaKnown RBP25■■□□□ 1.59
LINC00404-201ENST00000418660 LTKP29376 864 aa24.99■■□□□ 1.59
LINC00404-201ENST00000418660 IQGAP1P46940 1657 aa24.99■■□□□ 1.59
LINC00404-201ENST00000418660 TMEM2Q9UHN6 1383 aa24.98■■□□□ 1.59
LINC00404-201ENST00000418660 EID1Q9Y6B2 187 aa24.98■■□□□ 1.59
LINC00404-201ENST00000418660 ADGRB3O60242 1522 aa24.94■■□□□ 1.58
LINC00404-201ENST00000418660 CPS1P31327 1500 aa24.94■■□□□ 1.58
LINC00404-201ENST00000418660 E9PCH4 1651 aa24.94■■□□□ 1.58
LINC00404-201ENST00000418660 NAIPQ13075 1403 aa24.93■■□□□ 1.58
LINC00404-201ENST00000418660 HFM1A2PYH4 1435 aa24.86■■□□□ 1.57
LINC00404-201ENST00000418660 UBAP1LF5GYI3 381 aa24.86■■□□□ 1.57
LINC00404-201ENST00000418660 TMEM131LA2VDJ0 1609 aa24.84■■□□□ 1.57
LINC00404-201ENST00000418660 HDGFP51858 240 aaKnown RBP24.82■■□□□ 1.56
LINC00404-201ENST00000418660 ZFYVE9O95405 1425 aa24.81■■□□□ 1.56
LINC00404-201ENST00000418660 CHGAP10645 457 aaKnown RBP24.81■■□□□ 1.56
LINC00404-201ENST00000418660 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
LINC00404-201ENST00000418660 RIMS2Q9UQ26 1411 aa24.79■■□□□ 1.56
LINC00404-201ENST00000418660 LRRC7Q96NW7 1537 aa24.78■■□□□ 1.56
LINC00404-201ENST00000418660 MYO5BQ9ULV0 1848 aa24.78■■□□□ 1.56
LINC00404-201ENST00000418660 TRIM52Q96A61 297 aa24.77■■□□□ 1.56
LINC00404-201ENST00000418660 TOM1O60784 492 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms