RNA–Protein interactions for RNA: ENST00000416093.1

RAF1-202, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-202ENST00000416093 WASHC2CQ9Y4E1 1318 aa23.13■■□□□ 1.29
RAF1-202ENST00000416093 NCKAP5LQ9HCH0 1330 aa23.12■■□□□ 1.29
RAF1-202ENST00000416093 MYO3AQ8NEV4 1616 aa23.11■■□□□ 1.29
RAF1-202ENST00000416093 KDM5DQ9BY66 1539 aa23.1■■□□□ 1.29
RAF1-202ENST00000416093 PPARGC1BQ86YN6 1023 aaKnown RBP23.1■■□□□ 1.29
RAF1-202ENST00000416093 CEP170BQ9Y4F5 1589 aaPredicted RBP23.09■■□□□ 1.29
RAF1-202ENST00000416093 ZNF142P52746 1687 aaPredicted RBP23.07■■□□□ 1.28
RAF1-202ENST00000416093 ABCC5O15440 1437 aa23.07■■□□□ 1.28
RAF1-202ENST00000416093 PZPP20742 1482 aa23.06■■□□□ 1.28
RAF1-202ENST00000416093 TNRQ92752 1358 aa23.06■■□□□ 1.28
RAF1-202ENST00000416093 PTPN23Q9H3S7 1636 aa23.06■■□□□ 1.28
RAF1-202ENST00000416093 FAM135AQ9P2D6 1515 aa23.06■■□□□ 1.28
RAF1-202ENST00000416093 A2ML1A8K2U0 1454 aa23.05■■□□□ 1.28
RAF1-202ENST00000416093 FGD6Q6ZV73 1430 aa23.04■■□□□ 1.28
RAF1-202ENST00000416093 PKD2Q13563 968 aa23.03■■□□□ 1.28
RAF1-202ENST00000416093 RRP7BPQ9NSQ0 103 aa23.03■■□□□ 1.28
RAF1-202ENST00000416093 PLA2R1Q13018 1463 aa23.03■■□□□ 1.28
RAF1-202ENST00000416093 RNF17Q9BXT8 1623 aaKnown RBP23.02■■□□□ 1.28
RAF1-202ENST00000416093 DNMT1P26358 1616 aaKnown RBP23■■□□□ 1.27
RAF1-202ENST00000416093 TCOF1Q13428 1488 aaKnown RBP23■■□□□ 1.27
RAF1-202ENST00000416093 DUOX2Q9NRD8 1548 aa23■■□□□ 1.27
RAF1-202ENST00000416093 LTBP4Q8N2S1 1624 aa23■■□□□ 1.27
RAF1-202ENST00000416093 EIF2AK4Q9P2K8 1649 aaKnown RBP23■■□□□ 1.27
RAF1-202ENST00000416093 KIF15Q9NS87 1388 aa23■■□□□ 1.27
RAF1-202ENST00000416093 DAPK1P53355 1430 aa22.99■■□□□ 1.27
RAF1-202ENST00000416093 ABCC3O15438 1527 aa22.99■■□□□ 1.27
RAF1-202ENST00000416093 SHANK2Q9UPX8 1470 aa22.98■■□□□ 1.27
RAF1-202ENST00000416093 MROH1Q8NDA8 1641 aa22.98■■□□□ 1.27
RAF1-202ENST00000416093 CHIC2Q9UKJ5 165 aa22.98■■□□□ 1.27
RAF1-202ENST00000416093 CROCC2H7BZ55 1655 aa22.97■■□□□ 1.27
RAF1-202ENST00000416093 ZNF335Q9H4Z2 1342 aaPredicted RBP22.96■■□□□ 1.27
RAF1-202ENST00000416093 ZC3H13Q5T200 1668 aaKnown RBP22.93■■□□□ 1.26
RAF1-202ENST00000416093 THEMISQ8N1K5 641 aaPredicted RBP22.92■■□□□ 1.26
RAF1-202ENST00000416093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.92■■□□□ 1.26
RAF1-202ENST00000416093 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
RAF1-202ENST00000416093 ERBINQ96RT1 1412 aa22.91■■□□□ 1.26
RAF1-202ENST00000416093 CEP152O94986 1710 aa22.91■■□□□ 1.26
RAF1-202ENST00000416093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.91■■□□□ 1.263e-7■■■■□ 22
RAF1-202ENST00000416093 FAM50AQ14320 339 aaKnown RBP22.91■■□□□ 1.26
RAF1-202ENST00000416093 ERVK-7P63135 1459 aa22.9■■□□□ 1.26
RAF1-202ENST00000416093 ANKRD30AQ9BXX3 1397 aa22.89■■□□□ 1.26
RAF1-202ENST00000416093 SPATA31D1Q6ZQQ2 1576 aa22.89■■□□□ 1.26
RAF1-202ENST00000416093 ANKLE2Q86XL3 938 aa22.89■■□□□ 1.25
RAF1-202ENST00000416093 CFAP65Q6ZU64 1925 aaKnown RBP22.88■■□□□ 1.25
RAF1-202ENST00000416093 UGGT1Q9NYU2 1555 aa22.88■■□□□ 1.25
RAF1-202ENST00000416093 PRDM15P57071 1507 aaPredicted RBP22.86■■□□□ 1.25
RAF1-202ENST00000416093 NEURL4Q96JN8 1562 aa22.85■■□□□ 1.25
RAF1-202ENST00000416093 IQSEC2Q5JU85 1478 aa22.85■■□□□ 1.25
RAF1-202ENST00000416093 POLR1AO95602 1720 aaPredicted RBP22.84■■□□□ 1.25
RAF1-202ENST00000416093 ARHGAP31Q2M1Z3 1444 aa22.82■■□□□ 1.24
RAF1-202ENST00000416093 KANK1Q14678 1352 aa22.82■■□□□ 1.24
RAF1-202ENST00000416093 DEPDC5O75140 1603 aa22.82■■□□□ 1.24
RAF1-202ENST00000416093 ADGRL2O95490 1459 aa22.81■■□□□ 1.24
RAF1-202ENST00000416093 NPHP4O75161 1426 aaPredicted RBP22.79■■□□□ 1.24
RAF1-202ENST00000416093 MED14O60244 1454 aa22.77■■□□□ 1.24
RAF1-202ENST00000416093 UBAP1LF5GYI3 381 aa22.76■■□□□ 1.23
RAF1-202ENST00000416093 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
RAF1-202ENST00000416093 LMTK2Q8IWU2 1503 aa22.75■■□□□ 1.23
RAF1-202ENST00000416093 UBR1Q8IWV7 1749 aa22.74■■□□□ 1.23
RAF1-202ENST00000416093 RRBP1Q9P2E9 1410 aaKnown RBP22.74■■□□□ 1.23
RAF1-202ENST00000416093 ANKRD50Q9ULJ7 1429 aa22.74■■□□□ 1.23
RAF1-202ENST00000416093 LTKP29376 864 aa22.72■■□□□ 1.23
RAF1-202ENST00000416093 ITGAEP38570 1179 aa22.71■■□□□ 1.23
RAF1-202ENST00000416093 IDI1Q13907 227 aa22.7■■□□□ 1.22
RAF1-202ENST00000416093 TXNDC2Q86VQ3 553 aa22.7■■□□□ 1.22
RAF1-202ENST00000416093 IQGAP1P46940 1657 aa22.69■■□□□ 1.22
RAF1-202ENST00000416093 CPS1P31327 1500 aa22.69■■□□□ 1.22
RAF1-202ENST00000416093 ARHGAP23Q9P227 1491 aa22.68■■□□□ 1.22
RAF1-202ENST00000416093 STAG3Q9UJ98 1225 aa22.68■■□□□ 1.22
RAF1-202ENST00000416093 PIK3C2BO00750 1634 aa22.68■■□□□ 1.22
RAF1-202ENST00000416093 SCAF11Q99590 1463 aaKnown RBP22.67■■□□□ 1.22
RAF1-202ENST00000416093 SLIT1O75093 1534 aa22.67■■□□□ 1.22
RAF1-202ENST00000416093 NOS1P29475 1434 aa22.66■■□□□ 1.22
RAF1-202ENST00000416093 EFCAB6Q5THR3 1501 aa22.66■■□□□ 1.22
RAF1-202ENST00000416093 SYNMO15061 1565 aa22.65■■□□□ 1.22
RAF1-202ENST00000416093 EID1Q9Y6B2 187 aa22.65■■□□□ 1.22
RAF1-202ENST00000416093 ROCK1Q13464 1354 aa22.63■■□□□ 1.21
RAF1-202ENST00000416093 TMEM2Q9UHN6 1383 aa22.63■■□□□ 1.21
RAF1-202ENST00000416093 STRCP1A6NGW2 1772 aa22.61■■□□□ 1.21
RAF1-202ENST00000416093 TOM1O60784 492 aa22.6■■□□□ 1.21
RAF1-202ENST00000416093 PIP4K2BP78356 416 aa22.6■■□□□ 1.21
RAF1-202ENST00000416093 SLC52A1Q9NWF4 448 aa22.6■■□□□ 1.21
RAF1-202ENST00000416093 SCAF1Q9H7N4 1312 aaKnown RBP22.58■■□□□ 1.21
RAF1-202ENST00000416093 DISP3Q9P2K9 1392 aa22.57■■□□□ 1.2
RAF1-202ENST00000416093 RPRD2Q5VT52 1461 aaKnown RBP22.57■■□□□ 1.2
RAF1-202ENST00000416093 UNC13BO14795 1591 aa22.57■■□□□ 1.2
RAF1-202ENST00000416093 TET3O43151 1660 aa22.57■■□□□ 1.2
RAF1-202ENST00000416093 LRRC7Q96NW7 1537 aa22.57■■□□□ 1.2
RAF1-202ENST00000416093 KDM5AP29375 1690 aaKnown RBP22.55■■□□□ 1.2
RAF1-202ENST00000416093 ADGRB3O60242 1522 aa22.54■■□□□ 1.2
RAF1-202ENST00000416093 NUP155O75694 1391 aa22.52■■□□□ 1.2
RAF1-202ENST00000416093 HSPA1LP34931 641 aa22.52■■□□□ 1.2
RAF1-202ENST00000416093 GCC2Q8IWJ2 1684 aa22.52■■□□□ 1.2
RAF1-202ENST00000416093 ALKQ9UM73 1620 aa22.51■■□□□ 1.19
RAF1-202ENST00000416093 SLC26A8Q96RN1 970 aa22.51■■□□□ 1.19
RAF1-202ENST00000416093 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
RAF1-202ENST00000416093 IQGAP3Q86VI3 1631 aa22.49■■□□□ 1.19
RAF1-202ENST00000416093 E9PCH4 1651 aa22.49■■□□□ 1.19
RAF1-202ENST00000416093 CHGAP10645 457 aaKnown RBP22.48■■□□□ 1.19
RAF1-202ENST00000416093 ILDR2Q71H61 639 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms