RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 DAPK1P53355 1430 aa17.07■□□□□ 0.32
A1CF-208ENST00000414883 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
A1CF-208ENST00000414883 NPATQ14207 1427 aa17.06■□□□□ 0.32
A1CF-208ENST00000414883 KIF3BO15066 747 aa17.06■□□□□ 0.32
A1CF-208ENST00000414883 EIF2AK4Q9P2K8 1649 aaKnown RBP17.06■□□□□ 0.32
A1CF-208ENST00000414883 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
A1CF-208ENST00000414883 FAM135AQ9P2D6 1515 aa17.05■□□□□ 0.32
A1CF-208ENST00000414883 STRCQ7RTU9 1775 aa17.05■□□□□ 0.32
A1CF-208ENST00000414883 PTPRKQ15262 1439 aa17.04■□□□□ 0.32
A1CF-208ENST00000414883 UHRF1BP1Q6BDS2 1440 aa17.04■□□□□ 0.32
A1CF-208ENST00000414883 KDM5DQ9BY66 1539 aa17.03■□□□□ 0.32
A1CF-208ENST00000414883 DUOX2Q9NRD8 1548 aa17.03■□□□□ 0.32
A1CF-208ENST00000414883 KIF15Q9NS87 1388 aa17.01■□□□□ 0.31
A1CF-208ENST00000414883 ZNF142P52746 1687 aaPredicted RBP17■□□□□ 0.31
A1CF-208ENST00000414883 MYO3AQ8NEV4 1616 aa16.99■□□□□ 0.31
A1CF-208ENST00000414883 ABCC3O15438 1527 aa16.99■□□□□ 0.31
A1CF-208ENST00000414883 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
A1CF-208ENST00000414883 NCOA1Q15788 1441 aa16.98■□□□□ 0.31
A1CF-208ENST00000414883 DEPDC5O75140 1603 aa16.98■□□□□ 0.31
A1CF-208ENST00000414883 PZPP20742 1482 aa16.98■□□□□ 0.31
A1CF-208ENST00000414883 ZC3H13Q5T200 1668 aaKnown RBP16.97■□□□□ 0.31
A1CF-208ENST00000414883 ERBINQ96RT1 1412 aa16.97■□□□□ 0.31
A1CF-208ENST00000414883 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
A1CF-208ENST00000414883 PRDM15P57071 1507 aaPredicted RBP16.96■□□□□ 0.31
A1CF-208ENST00000414883 CEP152O94986 1710 aa16.96■□□□□ 0.31
A1CF-208ENST00000414883 ILDR1Q86SU0 546 aaPredicted RBP16.96■□□□□ 0.31
A1CF-208ENST00000414883 WASHC2CQ9Y4E1 1318 aa16.95■□□□□ 0.3
A1CF-208ENST00000414883 CEP170BQ9Y4F5 1589 aaPredicted RBP16.94■□□□□ 0.3
A1CF-208ENST00000414883 FBXO31Q5XUX0 539 aaPredicted RBP16.94■□□□□ 0.3
A1CF-208ENST00000414883 PPARGC1BQ86YN6 1023 aaKnown RBP16.94■□□□□ 0.3
A1CF-208ENST00000414883 CHIC2Q9UKJ5 165 aa16.94■□□□□ 0.3
A1CF-208ENST00000414883 ANKRD30AQ9BXX3 1397 aa16.93■□□□□ 0.3
A1CF-208ENST00000414883 FAM50AQ14320 339 aaKnown RBP16.93■□□□□ 0.3
A1CF-208ENST00000414883 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
A1CF-208ENST00000414883 VWDEQ8N2E2 1590 aa16.92■□□□□ 0.3
A1CF-208ENST00000414883 SPATA31D1Q6ZQQ2 1576 aa16.9■□□□□ 0.3
A1CF-208ENST00000414883 CFAP65Q6ZU64 1925 aaKnown RBP16.9■□□□□ 0.3
A1CF-208ENST00000414883 A2ML1A8K2U0 1454 aa16.9■□□□□ 0.3
A1CF-208ENST00000414883 TNRQ92752 1358 aa16.89■□□□□ 0.3
A1CF-208ENST00000414883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.29
A1CF-208ENST00000414883 ERVK-7P63135 1459 aa16.87■□□□□ 0.29
A1CF-208ENST00000414883 PTPRTO14522 1441 aa16.87■□□□□ 0.29
A1CF-208ENST00000414883 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
A1CF-208ENST00000414883 PLA2R1Q13018 1463 aa16.86■□□□□ 0.29
A1CF-208ENST00000414883 LMTK2Q8IWU2 1503 aa16.86■□□□□ 0.29
A1CF-208ENST00000414883 ROCK1Q13464 1354 aa16.85■□□□□ 0.29
A1CF-208ENST00000414883 RRBP1Q9P2E9 1410 aaKnown RBP16.85■□□□□ 0.29
A1CF-208ENST00000414883 ANKRD50Q9ULJ7 1429 aa16.84■□□□□ 0.29
A1CF-208ENST00000414883 NLRP1Q9C000 1473 aa16.84■□□□□ 0.29
A1CF-208ENST00000414883 NCKAP5LQ9HCH0 1330 aa16.82■□□□□ 0.28
A1CF-208ENST00000414883 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
A1CF-208ENST00000414883 UNC13BO14795 1591 aa16.81■□□□□ 0.28
A1CF-208ENST00000414883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.282e-6■■□□□ 11.6
A1CF-208ENST00000414883 NEURL4Q96JN8 1562 aa16.81■□□□□ 0.28
A1CF-208ENST00000414883 EFCAB6Q5THR3 1501 aa16.8■□□□□ 0.28
A1CF-208ENST00000414883 POLR1AO95602 1720 aaPredicted RBP16.8■□□□□ 0.28
A1CF-208ENST00000414883 UBR1Q8IWV7 1749 aa16.79■□□□□ 0.28
A1CF-208ENST00000414883 LTBP4Q8N2S1 1624 aa16.79■□□□□ 0.28
A1CF-208ENST00000414883 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
A1CF-208ENST00000414883 PKD2Q13563 968 aa16.78■□□□□ 0.28
A1CF-208ENST00000414883 KANK1Q14678 1352 aa16.77■□□□□ 0.28
A1CF-208ENST00000414883 SYNMO15061 1565 aa16.77■□□□□ 0.28
A1CF-208ENST00000414883 TET3O43151 1660 aa16.76■□□□□ 0.27
A1CF-208ENST00000414883 NOS1P29475 1434 aa16.76■□□□□ 0.27
A1CF-208ENST00000414883 GCC2Q8IWJ2 1684 aa16.75■□□□□ 0.27
A1CF-208ENST00000414883 PIK3C2BO00750 1634 aa16.74■□□□□ 0.27
A1CF-208ENST00000414883 ITGAEP38570 1179 aa16.74■□□□□ 0.27
A1CF-208ENST00000414883 CERKQ8TCT0 537 aa16.74■□□□□ 0.27
A1CF-208ENST00000414883 IQGAP3Q86VI3 1631 aa16.74■□□□□ 0.27
A1CF-208ENST00000414883 FBXO41Q8TF61 875 aa16.73■□□□□ 0.27
A1CF-208ENST00000414883 MED14O60244 1454 aa16.73■□□□□ 0.27
A1CF-208ENST00000414883 THEMISQ8N1K5 641 aaPredicted RBP16.72■□□□□ 0.27
A1CF-208ENST00000414883 RPRD2Q5VT52 1461 aaKnown RBP16.72■□□□□ 0.27
A1CF-208ENST00000414883 E9PCH4 1651 aa16.72■□□□□ 0.27
A1CF-208ENST00000414883 KDM5AP29375 1690 aaKnown RBP16.72■□□□□ 0.27
A1CF-208ENST00000414883 ARHGAP23Q9P227 1491 aa16.71■□□□□ 0.27
A1CF-208ENST00000414883 SLIT1O75093 1534 aa16.7■□□□□ 0.26
A1CF-208ENST00000414883 NAIPQ13075 1403 aa16.7■□□□□ 0.26
A1CF-208ENST00000414883 ZNF335Q9H4Z2 1342 aaPredicted RBP16.69■□□□□ 0.26
A1CF-208ENST00000414883 IDI1Q13907 227 aa16.68■□□□□ 0.26
A1CF-208ENST00000414883 ANKLE2Q86XL3 938 aa16.68■□□□□ 0.26
A1CF-208ENST00000414883 IQGAP1P46940 1657 aa16.68■□□□□ 0.26
A1CF-208ENST00000414883 MYO5BQ9ULV0 1848 aa16.67■□□□□ 0.26
A1CF-208ENST00000414883 NPHP4O75161 1426 aaPredicted RBP16.66■□□□□ 0.26
A1CF-208ENST00000414883 LTKP29376 864 aa16.65■□□□□ 0.26
A1CF-208ENST00000414883 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
A1CF-208ENST00000414883 NUP155O75694 1391 aa16.64■□□□□ 0.26
A1CF-208ENST00000414883 HFM1A2PYH4 1435 aa16.64■□□□□ 0.25
A1CF-208ENST00000414883 SCAF11Q99590 1463 aaKnown RBP16.64■□□□□ 0.25
A1CF-208ENST00000414883 STRCP1A6NGW2 1772 aa16.64■□□□□ 0.25
A1CF-208ENST00000414883 IQSEC2Q5JU85 1478 aa16.63■□□□□ 0.25
A1CF-208ENST00000414883 TMEM131LA2VDJ0 1609 aa16.63■□□□□ 0.25
A1CF-208ENST00000414883 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
A1CF-208ENST00000414883 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
A1CF-208ENST00000414883 SPHKAPQ2M3C7 1700 aa16.59■□□□□ 0.25
A1CF-208ENST00000414883 TXNDC2Q86VQ3 553 aa16.58■□□□□ 0.24
A1CF-208ENST00000414883 ZFYVE9O95405 1425 aa16.58■□□□□ 0.24
A1CF-208ENST00000414883 CPS1P31327 1500 aa16.56■□□□□ 0.24
A1CF-208ENST00000414883 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
A1CF-208ENST00000414883 EID1Q9Y6B2 187 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms