RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 DNMT1P26358 1616 aaKnown RBP26.21■■□□□ 1.79
SCAMP4-203ENST00000411971 KDM5DQ9BY66 1539 aa26.2■■□□□ 1.79
SCAMP4-203ENST00000411971 TCOF1Q13428 1488 aaKnown RBP26.19■■□□□ 1.78
SCAMP4-203ENST00000411971 MYOM3Q5VTT5 1437 aa26.19■■□□□ 1.78
SCAMP4-203ENST00000411971 PLA2R1Q13018 1463 aa26.17■■□□□ 1.78
SCAMP4-203ENST00000411971 RNF17Q9BXT8 1623 aaKnown RBP26.16■■□□□ 1.78
SCAMP4-203ENST00000411971 A2ML1A8K2U0 1454 aa26.16■■□□□ 1.78
SCAMP4-203ENST00000411971 PZPP20742 1482 aa26.16■■□□□ 1.78
SCAMP4-203ENST00000411971 MROH1Q8NDA8 1641 aa26.15■■□□□ 1.78
SCAMP4-203ENST00000411971 TSPY4P0CV99 314 aa26.14■■□□□ 1.78
SCAMP4-203ENST00000411971 TSPY10P0CW01 314 aa26.14■■□□□ 1.78
SCAMP4-203ENST00000411971 MIA2Q96PC5 1412 aa26.14■■□□□ 1.77
SCAMP4-203ENST00000411971 FAM135AQ9P2D6 1515 aa26.13■■□□□ 1.77
SCAMP4-203ENST00000411971 ZNF335Q9H4Z2 1342 aaPredicted RBP26.13■■□□□ 1.77
SCAMP4-203ENST00000411971 TNRQ92752 1358 aa26.11■■□□□ 1.77
SCAMP4-203ENST00000411971 WASHC2CQ9Y4E1 1318 aa26.11■■□□□ 1.77
SCAMP4-203ENST00000411971 NEURL4Q96JN8 1562 aa26.1■■□□□ 1.77
SCAMP4-203ENST00000411971 CROCC2H7BZ55 1655 aa26.09■■□□□ 1.77
SCAMP4-203ENST00000411971 ABCC3O15438 1527 aa26.09■■□□□ 1.77
SCAMP4-203ENST00000411971 CEP152O94986 1710 aa26.08■■□□□ 1.77
SCAMP4-203ENST00000411971 POLR1AO95602 1720 aaPredicted RBP26.08■■□□□ 1.77
SCAMP4-203ENST00000411971 EIF2AK4Q9P2K8 1649 aaKnown RBP26.08■■□□□ 1.77
SCAMP4-203ENST00000411971 PTPN23Q9H3S7 1636 aa26.07■■□□□ 1.76
SCAMP4-203ENST00000411971 PKD2Q13563 968 aa26.07■■□□□ 1.76
SCAMP4-203ENST00000411971 CFAP65Q6ZU64 1925 aaKnown RBP26.07■■□□□ 1.76
SCAMP4-203ENST00000411971 ABCC5O15440 1437 aa26.05■■□□□ 1.76
SCAMP4-203ENST00000411971 ZC3H13Q5T200 1668 aaKnown RBP26.04■■□□□ 1.76
SCAMP4-203ENST00000411971 IQSEC2Q5JU85 1478 aa26.02■■□□□ 1.76
SCAMP4-203ENST00000411971 SPATA31D1Q6ZQQ2 1576 aa26.01■■□□□ 1.75
SCAMP4-203ENST00000411971 DUOX2Q9NRD8 1548 aa26■■□□□ 1.75
SCAMP4-203ENST00000411971 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26■■□□□ 1.759e-7■■■□□ 16.5
SCAMP4-203ENST00000411971 UGGT1Q9NYU2 1555 aa25.98■■□□□ 1.75
SCAMP4-203ENST00000411971 ERVK-7P63135 1459 aa25.98■■□□□ 1.75
SCAMP4-203ENST00000411971 SHANK2Q9UPX8 1470 aa25.98■■□□□ 1.75
SCAMP4-203ENST00000411971 FGD6Q6ZV73 1430 aa25.97■■□□□ 1.75
SCAMP4-203ENST00000411971 NLRP1Q9C000 1473 aa25.97■■□□□ 1.75
SCAMP4-203ENST00000411971 DAPK1P53355 1430 aa25.97■■□□□ 1.75
SCAMP4-203ENST00000411971 KIF15Q9NS87 1388 aa25.96■■□□□ 1.75
SCAMP4-203ENST00000411971 RRP7BPQ9NSQ0 103 aa25.95■■□□□ 1.74
SCAMP4-203ENST00000411971 PRDM15P57071 1507 aaPredicted RBP25.93■■□□□ 1.74
SCAMP4-203ENST00000411971 DEPDC5O75140 1603 aa25.92■■□□□ 1.74
SCAMP4-203ENST00000411971 VWDEQ8N2E2 1590 aa25.9■■□□□ 1.74
SCAMP4-203ENST00000411971 APLP2Q06481 763 aa25.9■■□□□ 1.74
SCAMP4-203ENST00000411971 UBR1Q8IWV7 1749 aa25.9■■□□□ 1.74
SCAMP4-203ENST00000411971 ERBINQ96RT1 1412 aa25.89■■□□□ 1.74
SCAMP4-203ENST00000411971 STRCP1A6NGW2 1772 aa25.89■■□□□ 1.73
SCAMP4-203ENST00000411971 MED14O60244 1454 aa25.88■■□□□ 1.73
SCAMP4-203ENST00000411971 THEMISQ8N1K5 641 aaPredicted RBP25.88■■□□□ 1.73
SCAMP4-203ENST00000411971 CHIC2Q9UKJ5 165 aa25.88■■□□□ 1.73
SCAMP4-203ENST00000411971 IQGAP1P46940 1657 aa25.87■■□□□ 1.73
SCAMP4-203ENST00000411971 ANKLE2Q86XL3 938 aa25.86■■□□□ 1.73
SCAMP4-203ENST00000411971 NPHP4O75161 1426 aaPredicted RBP25.86■■□□□ 1.73
SCAMP4-203ENST00000411971 UBAP1LF5GYI3 381 aa25.85■■□□□ 1.73
SCAMP4-203ENST00000411971 ARHGAP31Q2M1Z3 1444 aa25.82■■□□□ 1.72
SCAMP4-203ENST00000411971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.82■■□□□ 1.72
SCAMP4-203ENST00000411971 CPS1P31327 1500 aa25.8■■□□□ 1.72
SCAMP4-203ENST00000411971 ILDR2Q71H61 639 aa25.8■■□□□ 1.72
SCAMP4-203ENST00000411971 PIK3C2BO00750 1634 aa25.8■■□□□ 1.72
SCAMP4-203ENST00000411971 ALKQ9UM73 1620 aa25.8■■□□□ 1.72
SCAMP4-203ENST00000411971 DISP3Q9P2K9 1392 aa25.79■■□□□ 1.72
SCAMP4-203ENST00000411971 ANKRD30AQ9BXX3 1397 aa25.77■■□□□ 1.72
SCAMP4-203ENST00000411971 ADGRL2O95490 1459 aa25.77■■□□□ 1.72
SCAMP4-203ENST00000411971 ARHGAP23Q9P227 1491 aa25.76■■□□□ 1.71
SCAMP4-203ENST00000411971 SYNMO15061 1565 aa25.75■■□□□ 1.71
SCAMP4-203ENST00000411971 LMTK2Q8IWU2 1503 aa25.75■■□□□ 1.71
SCAMP4-203ENST00000411971 LTKP29376 864 aa25.75■■□□□ 1.71
SCAMP4-203ENST00000411971 SLIT1O75093 1534 aa25.73■■□□□ 1.71
SCAMP4-203ENST00000411971 FAM50AQ14320 339 aaKnown RBP25.72■■□□□ 1.71
SCAMP4-203ENST00000411971 SCAF11Q99590 1463 aaKnown RBP25.72■■□□□ 1.71
SCAMP4-203ENST00000411971 EFCAB6Q5THR3 1501 aa25.69■■□□□ 1.7
SCAMP4-203ENST00000411971 LRRC7Q96NW7 1537 aa25.69■■□□□ 1.7
SCAMP4-203ENST00000411971 KANK1Q14678 1352 aa25.68■■□□□ 1.7
SCAMP4-203ENST00000411971 XIRP1Q702N8 1843 aaKnown RBP25.67■■□□□ 1.7
SCAMP4-203ENST00000411971 PIP4K2BP78356 416 aa25.67■■□□□ 1.7
SCAMP4-203ENST00000411971 NOS1P29475 1434 aa25.66■■□□□ 1.7
SCAMP4-203ENST00000411971 IDI1Q13907 227 aa25.66■■□□□ 1.7
SCAMP4-203ENST00000411971 TXNDC2Q86VQ3 553 aa25.65■■□□□ 1.7
SCAMP4-203ENST00000411971 HSPA1LP34931 641 aa25.64■■□□□ 1.7
SCAMP4-203ENST00000411971 KDM5AP29375 1690 aaKnown RBP25.64■■□□□ 1.69
SCAMP4-203ENST00000411971 ANKRD50Q9ULJ7 1429 aa25.63■■□□□ 1.69
SCAMP4-203ENST00000411971 MYO5BQ9ULV0 1848 aa25.63■■□□□ 1.69
SCAMP4-203ENST00000411971 SCAF1Q9H7N4 1312 aaKnown RBP25.63■■□□□ 1.69
SCAMP4-203ENST00000411971 TMEM2Q9UHN6 1383 aa25.62■■□□□ 1.69
SCAMP4-203ENST00000411971 TOM1O60784 492 aa25.59■■□□□ 1.69
SCAMP4-203ENST00000411971 PPARGC1BQ86YN6 1023 aaKnown RBP25.59■■□□□ 1.69
SCAMP4-203ENST00000411971 UNC13BO14795 1591 aa25.59■■□□□ 1.69
SCAMP4-203ENST00000411971 TET3O43151 1660 aa25.58■■□□□ 1.69
SCAMP4-203ENST00000411971 ADGRB3O60242 1522 aa25.58■■□□□ 1.68
SCAMP4-203ENST00000411971 GCC2Q8IWJ2 1684 aa25.55■■□□□ 1.68
SCAMP4-203ENST00000411971 E9PCH4 1651 aa25.54■■□□□ 1.68
SCAMP4-203ENST00000411971 STAG3Q9UJ98 1225 aa25.53■■□□□ 1.68
SCAMP4-203ENST00000411971 EID1Q9Y6B2 187 aa25.52■■□□□ 1.68
SCAMP4-203ENST00000411971 RPRD2Q5VT52 1461 aaKnown RBP25.51■■□□□ 1.67
SCAMP4-203ENST00000411971 MED1Q15648 1581 aaPredicted RBP25.51■■□□□ 1.67
SCAMP4-203ENST00000411971 TMEM131LA2VDJ0 1609 aa25.49■■□□□ 1.67
SCAMP4-203ENST00000411971 SLC26A8Q96RN1 970 aa25.49■■□□□ 1.67
SCAMP4-203ENST00000411971 SENP3Q9H4L4 574 aaPredicted RBP25.49■■□□□ 1.67
SCAMP4-203ENST00000411971 IQGAP3Q86VI3 1631 aa25.48■■□□□ 1.67
SCAMP4-203ENST00000411971 ZFYVE9O95405 1425 aa25.47■■□□□ 1.67
SCAMP4-203ENST00000411971 ROCK1Q13464 1354 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms