RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CLTCQ00610 1675 aaKnown RBP22.71■■□□□ 1.23
MCF2L-210ENST00000409954 CAMSAP1Q5T5Y3 1602 aa22.68■■□□□ 1.22
MCF2L-210ENST00000409954 FAM135AQ9P2D6 1515 aa22.67■■□□□ 1.22
MCF2L-210ENST00000409954 PLA2R1Q13018 1463 aa22.66■■□□□ 1.22
MCF2L-210ENST00000409954 TNRQ92752 1358 aa22.66■■□□□ 1.22
MCF2L-210ENST00000409954 THEMISQ8N1K5 641 aaPredicted RBP22.66■■□□□ 1.22
MCF2L-210ENST00000409954 A2ML1A8K2U0 1454 aa22.63■■□□□ 1.21
MCF2L-210ENST00000409954 KDM5DQ9BY66 1539 aa22.62■■□□□ 1.21
MCF2L-210ENST00000409954 PZPP20742 1482 aa22.62■■□□□ 1.21
MCF2L-210ENST00000409954 MAST1Q9Y2H9 1570 aa22.61■■□□□ 1.21
MCF2L-210ENST00000409954 CEP170BQ9Y4F5 1589 aaPredicted RBP22.61■■□□□ 1.21
MCF2L-210ENST00000409954 ANKLE2Q86XL3 938 aa22.6■■□□□ 1.21
MCF2L-210ENST00000409954 TCOF1Q13428 1488 aaKnown RBP22.6■■□□□ 1.21
MCF2L-210ENST00000409954 RRP7BPQ9NSQ0 103 aa22.58■■□□□ 1.21
MCF2L-210ENST00000409954 LTBP4Q8N2S1 1624 aa22.57■■□□□ 1.2
MCF2L-210ENST00000409954 MYO3AQ8NEV4 1616 aa22.57■■□□□ 1.2
MCF2L-210ENST00000409954 ZNF335Q9H4Z2 1342 aaPredicted RBP22.57■■□□□ 1.2
MCF2L-210ENST00000409954 IQSEC2Q5JU85 1478 aa22.56■■□□□ 1.2
MCF2L-210ENST00000409954 ABCC5O15440 1437 aa22.56■■□□□ 1.2
MCF2L-210ENST00000409954 ZNF142P52746 1687 aaPredicted RBP22.55■■□□□ 1.2
MCF2L-210ENST00000409954 NLRP1Q9C000 1473 aa22.54■■□□□ 1.2
MCF2L-210ENST00000409954 DUOX2Q9NRD8 1548 aa22.54■■□□□ 1.2
MCF2L-210ENST00000409954 KIF15Q9NS87 1388 aa22.53■■□□□ 1.2
MCF2L-210ENST00000409954 DNMT1P26358 1616 aaKnown RBP22.53■■□□□ 1.2
MCF2L-210ENST00000409954 FGD6Q6ZV73 1430 aa22.52■■□□□ 1.2
MCF2L-210ENST00000409954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.51■■□□□ 1.193e-7■■□□□ 13
MCF2L-210ENST00000409954 SHANK2Q9UPX8 1470 aa22.5■■□□□ 1.19
MCF2L-210ENST00000409954 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
MCF2L-210ENST00000409954 ANKRD30AQ9BXX3 1397 aa22.5■■□□□ 1.19
MCF2L-210ENST00000409954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.49■■□□□ 1.191e-6■■■□□ 16.5
MCF2L-210ENST00000409954 DAPK1P53355 1430 aa22.48■■□□□ 1.19
MCF2L-210ENST00000409954 ABCC3O15438 1527 aa22.48■■□□□ 1.19
MCF2L-210ENST00000409954 RNF17Q9BXT8 1623 aaKnown RBP22.48■■□□□ 1.19
MCF2L-210ENST00000409954 EIF2AK4Q9P2K8 1649 aaKnown RBP22.48■■□□□ 1.19
MCF2L-210ENST00000409954 ERBINQ96RT1 1412 aa22.48■■□□□ 1.19
MCF2L-210ENST00000409954 PTPN23Q9H3S7 1636 aa22.47■■□□□ 1.19
MCF2L-210ENST00000409954 KANK1Q14678 1352 aa22.47■■□□□ 1.19
MCF2L-210ENST00000409954 UBAP1LF5GYI3 381 aa22.46■■□□□ 1.19
MCF2L-210ENST00000409954 UGGT1Q9NYU2 1555 aa22.46■■□□□ 1.19
MCF2L-210ENST00000409954 FAM50AQ14320 339 aaKnown RBP22.44■■□□□ 1.18
MCF2L-210ENST00000409954 ARHGAP31Q2M1Z3 1444 aa22.44■■□□□ 1.18
MCF2L-210ENST00000409954 ZC3H13Q5T200 1668 aaKnown RBP22.42■■□□□ 1.18
MCF2L-210ENST00000409954 SPATA31D1Q6ZQQ2 1576 aa22.42■■□□□ 1.18
MCF2L-210ENST00000409954 ERVK-7P63135 1459 aa22.41■■□□□ 1.18
MCF2L-210ENST00000409954 MED14O60244 1454 aa22.41■■□□□ 1.18
MCF2L-210ENST00000409954 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
MCF2L-210ENST00000409954 TOM1O60784 492 aa22.38■■□□□ 1.17
MCF2L-210ENST00000409954 MROH1Q8NDA8 1641 aa22.38■■□□□ 1.17
MCF2L-210ENST00000409954 TXNDC2Q86VQ3 553 aa22.37■■□□□ 1.17
MCF2L-210ENST00000409954 EID1Q9Y6B2 187 aa22.37■■□□□ 1.17
MCF2L-210ENST00000409954 STAG3Q9UJ98 1225 aa22.36■■□□□ 1.17
MCF2L-210ENST00000409954 CPS1P31327 1500 aa22.34■■□□□ 1.17
MCF2L-210ENST00000409954 PRDM15P57071 1507 aaPredicted RBP22.34■■□□□ 1.17
MCF2L-210ENST00000409954 NEURL4Q96JN8 1562 aa22.33■■□□□ 1.17
MCF2L-210ENST00000409954 IDI1Q13907 227 aa22.33■■□□□ 1.17
MCF2L-210ENST00000409954 DEPDC5O75140 1603 aa22.32■■□□□ 1.16
MCF2L-210ENST00000409954 LTKP29376 864 aa22.32■■□□□ 1.16
MCF2L-210ENST00000409954 CROCC2H7BZ55 1655 aa22.31■■□□□ 1.16
MCF2L-210ENST00000409954 ADGRL2O95490 1459 aa22.31■■□□□ 1.16
MCF2L-210ENST00000409954 SLC52A1Q9NWF4 448 aa22.31■■□□□ 1.16
MCF2L-210ENST00000409954 DISP3Q9P2K9 1392 aa22.3■■□□□ 1.16
MCF2L-210ENST00000409954 LMTK2Q8IWU2 1503 aa22.29■■□□□ 1.16
MCF2L-210ENST00000409954 ANKRD50Q9ULJ7 1429 aa22.29■■□□□ 1.16
MCF2L-210ENST00000409954 POLR1AO95602 1720 aaPredicted RBP22.28■■□□□ 1.16
MCF2L-210ENST00000409954 CEP152O94986 1710 aa22.27■■□□□ 1.16
MCF2L-210ENST00000409954 PIP4K2BP78356 416 aa22.26■■□□□ 1.15
MCF2L-210ENST00000409954 SCAF11Q99590 1463 aaKnown RBP22.26■■□□□ 1.15
MCF2L-210ENST00000409954 TMEM2Q9UHN6 1383 aa22.25■■□□□ 1.15
MCF2L-210ENST00000409954 ARHGAP23Q9P227 1491 aa22.25■■□□□ 1.15
MCF2L-210ENST00000409954 CFAP65Q6ZU64 1925 aaKnown RBP22.25■■□□□ 1.15
MCF2L-210ENST00000409954 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
MCF2L-210ENST00000409954 SLIT1O75093 1534 aa22.24■■□□□ 1.15
MCF2L-210ENST00000409954 VWDEQ8N2E2 1590 aa22.24■■□□□ 1.15
MCF2L-210ENST00000409954 HDGFP51858 240 aaKnown RBP22.23■■□□□ 1.15
MCF2L-210ENST00000409954 NOS1P29475 1434 aa22.22■■□□□ 1.15
MCF2L-210ENST00000409954 ROCK1Q13464 1354 aa22.21■■□□□ 1.15
MCF2L-210ENST00000409954 UBR1Q8IWV7 1749 aa22.2■■□□□ 1.14
MCF2L-210ENST00000409954 IQGAP1P46940 1657 aa22.2■■□□□ 1.14
MCF2L-210ENST00000409954 RPRD2Q5VT52 1461 aaKnown RBP22.18■■□□□ 1.14
MCF2L-210ENST00000409954 HSPA1LP34931 641 aa22.18■■□□□ 1.14
MCF2L-210ENST00000409954 LRRC7Q96NW7 1537 aa22.16■■□□□ 1.14
MCF2L-210ENST00000409954 KCNA6P17658 529 aa22.15■■□□□ 1.14
MCF2L-210ENST00000409954 ITGAEP38570 1179 aa22.15■■□□□ 1.14
MCF2L-210ENST00000409954 PPARGC1BQ86YN6 1023 aaKnown RBP22.15■■□□□ 1.14
MCF2L-210ENST00000409954 EFCAB6Q5THR3 1501 aa22.15■■□□□ 1.14
MCF2L-210ENST00000409954 ILDR2Q71H61 639 aa22.14■■□□□ 1.13
MCF2L-210ENST00000409954 BCANQ96GW7 911 aa22.13■■□□□ 1.13
MCF2L-210ENST00000409954 PIK3C2BO00750 1634 aa22.13■■□□□ 1.13
MCF2L-210ENST00000409954 SLC26A8Q96RN1 970 aa22.12■■□□□ 1.13
MCF2L-210ENST00000409954 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.11■■□□□ 1.13
MCF2L-210ENST00000409954 KDM5AP29375 1690 aaKnown RBP22.11■■□□□ 1.13
MCF2L-210ENST00000409954 NUP155O75694 1391 aa22.1■■□□□ 1.13
MCF2L-210ENST00000409954 SYNMO15061 1565 aa22.08■■□□□ 1.13
MCF2L-210ENST00000409954 PROSER2Q86WR7 435 aaPredicted RBP22.08■■□□□ 1.13
MCF2L-210ENST00000409954 SOCS7O14512 581 aa22.07■■□□□ 1.12
MCF2L-210ENST00000409954 PPP1R15AO75807 674 aaPredicted RBP22.07■■□□□ 1.12
MCF2L-210ENST00000409954 CHGAP10645 457 aaKnown RBP22.07■■□□□ 1.12
MCF2L-210ENST00000409954 TBX22Q9Y458 520 aa22.05■■□□□ 1.12
MCF2L-210ENST00000409954 ADGRB3O60242 1522 aa22.03■■□□□ 1.12
MCF2L-210ENST00000409954 TET3O43151 1660 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms