RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 MAGI2Q86UL8 1455 aa21.12■□□□□ 0.97
SCAMP4-202ENST00000409472 DCAF11Q8TEB1 546 aa21.12■□□□□ 0.97
SCAMP4-202ENST00000409472 ZFYVE16Q7Z3T8 1539 aa21.11■□□□□ 0.97
SCAMP4-202ENST00000409472 AFAP1Q8N556 730 aa21.11■□□□□ 0.97
SCAMP4-202ENST00000409472 CCDC144AA2RUR9 1427 aa21.1■□□□□ 0.97
SCAMP4-202ENST00000409472 ERBINQ96RT1 1412 aa21.1■□□□□ 0.97
SCAMP4-202ENST00000409472 ANP32EQ9BTT0 268 aa21.1■□□□□ 0.97
SCAMP4-202ENST00000409472 ABCA9Q8IUA7 1624 aa21.09■□□□□ 0.97
SCAMP4-202ENST00000409472 ARAP3Q8WWN8 1544 aa21.07■□□□□ 0.96
SCAMP4-202ENST00000409472 POLR3GLQ9BT43 218 aa21.07■□□□□ 0.96
SCAMP4-202ENST00000409472 PRKRIP1Q9H875 184 aaPredicted RBP21.07■□□□□ 0.96
SCAMP4-202ENST00000409472 RGL3Q3MIN7 710 aa21.05■□□□□ 0.96
SCAMP4-202ENST00000409472 CARD11Q9BXL7 1154 aa21.05■□□□□ 0.96
SCAMP4-202ENST00000409472 FANCAO15360 1455 aa21.05■□□□□ 0.96
SCAMP4-202ENST00000409472 A2MP01023 1474 aa21.05■□□□□ 0.96
SCAMP4-202ENST00000409472 ASXL2Q76L83 1435 aa21.05■□□□□ 0.96
SCAMP4-202ENST00000409472 SPAG9O60271 1321 aaKnown RBP21.05■□□□□ 0.96
SCAMP4-202ENST00000409472 TRPM1Q7Z4N2 1603 aa21.04■□□□□ 0.96
SCAMP4-202ENST00000409472 PRAG1Q86YV5 1406 aa21.03■□□□□ 0.96
SCAMP4-202ENST00000409472 DHX29Q7Z478 1369 aaKnown RBP21.02■□□□□ 0.96
SCAMP4-202ENST00000409472 INO80Q9ULG1 1556 aaPredicted RBP21.02■□□□□ 0.95
SCAMP4-202ENST00000409472 CNGB1Q14028 1251 aaPredicted RBP21.01■□□□□ 0.95
SCAMP4-202ENST00000409472 E9PCH4 1651 aa21■□□□□ 0.95
SCAMP4-202ENST00000409472 ROCK2O75116 1388 aaKnown RBP21■□□□□ 0.95
SCAMP4-202ENST00000409472 ATP7AQ04656 1500 aa21■□□□□ 0.95
SCAMP4-202ENST00000409472 ST20-MTHFSA0A0A6YYL1 179 aa21■□□□□ 0.95
SCAMP4-202ENST00000409472 HNRNPUQ00839 825 aaKnown RBP eCLIP21■□□□□ 0.95
SCAMP4-202ENST00000409472 ADGRL1O94910 1474 aa20.98■□□□□ 0.95
SCAMP4-202ENST00000409472 RTEL1-TNFRSF6BF6WH68 1400 aa20.98■□□□□ 0.95
SCAMP4-202ENST00000409472 NBPF1Q3BBV0 1214 aa20.97■□□□□ 0.95
SCAMP4-202ENST00000409472 DEPDC5O75140 1603 aa20.96■□□□□ 0.95
SCAMP4-202ENST00000409472 ATP10AO60312 1499 aa20.96■□□□□ 0.95
SCAMP4-202ENST00000409472 SCAPERQ9BY12 1400 aa20.96■□□□□ 0.95
SCAMP4-202ENST00000409472 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
SCAMP4-202ENST00000409472 MRS2Q9HD23 443 aa20.94■□□□□ 0.94
SCAMP4-202ENST00000409472 BCANQ96GW7 911 aa20.93■□□□□ 0.94
SCAMP4-202ENST00000409472 FAM9BQ8IZU0 186 aa20.92■□□□□ 0.94
SCAMP4-202ENST00000409472 FKBP8Q14318 412 aa20.92■□□□□ 0.94
SCAMP4-202ENST00000409472 MROH1Q8NDA8 1641 aa20.9■□□□□ 0.94
SCAMP4-202ENST00000409472 SPHKAPQ2M3C7 1700 aa20.9■□□□□ 0.94
SCAMP4-202ENST00000409472 KIDINS220Q9ULH0 1771 aa20.89■□□□□ 0.93
SCAMP4-202ENST00000409472 CLTCL1P53675 1640 aa20.89■□□□□ 0.93
SCAMP4-202ENST00000409472 TRPM2O94759 1503 aa20.88■□□□□ 0.93
SCAMP4-202ENST00000409472 MYT1LQ9UL68 1186 aa20.88■□□□□ 0.93
SCAMP4-202ENST00000409472 PRDM15P57071 1507 aaPredicted RBP20.88■□□□□ 0.93
SCAMP4-202ENST00000409472 GPRASP1Q5JY77 1395 aa20.88■□□□□ 0.93
SCAMP4-202ENST00000409472 TET3O43151 1660 aa20.87■□□□□ 0.93
SCAMP4-202ENST00000409472 ARID4BQ4LE39 1312 aaPredicted RBP20.87■□□□□ 0.93
SCAMP4-202ENST00000409472 VWDEQ8N2E2 1590 aa20.87■□□□□ 0.93
SCAMP4-202ENST00000409472 KIF3BO15066 747 aa20.86■□□□□ 0.93
SCAMP4-202ENST00000409472 CEP152O94986 1710 aa20.86■□□□□ 0.93
SCAMP4-202ENST00000409472 RNF17Q9BXT8 1623 aaKnown RBP20.85■□□□□ 0.93
SCAMP4-202ENST00000409472 LAMC1P11047 1609 aa20.85■□□□□ 0.93
SCAMP4-202ENST00000409472 EIF2AK4Q9P2K8 1649 aaKnown RBP20.85■□□□□ 0.93
SCAMP4-202ENST00000409472 UGGT1Q9NYU2 1555 aa20.84■□□□□ 0.93
SCAMP4-202ENST00000409472 MADDQ8WXG6 1647 aa20.84■□□□□ 0.93
SCAMP4-202ENST00000409472 PTPRTO14522 1441 aa20.83■□□□□ 0.92
SCAMP4-202ENST00000409472 DISP3Q9P2K9 1392 aa20.81■□□□□ 0.92
SCAMP4-202ENST00000409472 DNAJC5Q9H3Z4 198 aa20.81■□□□□ 0.92
SCAMP4-202ENST00000409472 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
SCAMP4-202ENST00000409472 ZNF518AQ6AHZ1 1483 aa20.79■□□□□ 0.92
SCAMP4-202ENST00000409472 COL17A1Q9UMD9 1497 aaPredicted RBP20.79■□□□□ 0.92
SCAMP4-202ENST00000409472 CD109Q6YHK3 1445 aa20.79■□□□□ 0.92
SCAMP4-202ENST00000409472 TESK2Q96S53 571 aa20.79■□□□□ 0.92
SCAMP4-202ENST00000409472 PPRC1Q5VV67 1664 aaKnown RBP20.78■□□□□ 0.92
SCAMP4-202ENST00000409472 SENP3-EIF4A1A0A087X0R7 540 aa20.77■□□□□ 0.92
SCAMP4-202ENST00000409472 FRMPD1Q5SYB0 1578 aa20.77■□□□□ 0.92
SCAMP4-202ENST00000409472 POGZQ7Z3K3 1410 aa20.76■□□□□ 0.91
SCAMP4-202ENST00000409472 KANK1Q14678 1352 aa20.76■□□□□ 0.91
SCAMP4-202ENST00000409472 EFCAB6Q5THR3 1501 aa20.75■□□□□ 0.91
SCAMP4-202ENST00000409472 NEFLP07196 543 aa20.74■□□□□ 0.91
SCAMP4-202ENST00000409472 IQGAP1P46940 1657 aa20.74■□□□□ 0.91
SCAMP4-202ENST00000409472 IRX6P78412 446 aaPredicted RBP20.74■□□□□ 0.91
SCAMP4-202ENST00000409472 TSHZ2Q9NRE2 1034 aa20.74■□□□□ 0.91
SCAMP4-202ENST00000409472 ZBED9Q6R2W3 1325 aa20.73■□□□□ 0.91
SCAMP4-202ENST00000409472 ABCA6Q8N139 1617 aa20.72■□□□□ 0.91
SCAMP4-202ENST00000409472 MROH2AA6NES4 1674 aa20.72■□□□□ 0.91
SCAMP4-202ENST00000409472 CFAP74Q9C0B2 1584 aa20.72■□□□□ 0.91
SCAMP4-202ENST00000409472 HECW2Q9P2P5 1572 aa20.71■□□□□ 0.91
SCAMP4-202ENST00000409472 PRKCSHP14314 528 aaPredicted RBP20.71■□□□□ 0.91
SCAMP4-202ENST00000409472 CFAP65Q6ZU64 1925 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-202ENST00000409472 RAPGEF3O95398 923 aa20.67■□□□□ 0.9
SCAMP4-202ENST00000409472 MLH3Q9UHC1 1453 aa20.66■□□□□ 0.9
SCAMP4-202ENST00000409472 PER1O15534 1290 aaPredicted RBP20.66■□□□□ 0.9
SCAMP4-202ENST00000409472 PNISRQ8TF01 805 aaKnown RBP20.66■□□□□ 0.9
SCAMP4-202ENST00000409472 KIF1BO60333 1816 aa20.65■□□□□ 0.9
SCAMP4-202ENST00000409472 MYBBP1AQ9BQG0 1328 aaKnown RBP20.65■□□□□ 0.9
SCAMP4-202ENST00000409472 LMTK2Q8IWU2 1503 aa20.65■□□□□ 0.9
SCAMP4-202ENST00000409472 IFT172Q9UG01 1749 aa20.65■□□□□ 0.9
SCAMP4-202ENST00000409472 TMC1Q8TDI8 760 aa20.64■□□□□ 0.89
SCAMP4-202ENST00000409472 PARD3Q8TEW0 1356 aa20.64■□□□□ 0.89
SCAMP4-202ENST00000409472 GGT6Q6P531 493 aa20.63■□□□□ 0.89
SCAMP4-202ENST00000409472 MAP3K4Q9Y6R4 1608 aa20.63■□□□□ 0.89
SCAMP4-202ENST00000409472 NPATQ14207 1427 aa20.63■□□□□ 0.89
SCAMP4-202ENST00000409472 ADGRF5Q8IZF2 1346 aa20.62■□□□□ 0.89
SCAMP4-202ENST00000409472 TMF1P82094 1093 aa20.62■□□□□ 0.89
SCAMP4-202ENST00000409472 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
SCAMP4-202ENST00000409472 PANK3Q9H999 370 aa20.61■□□□□ 0.89
SCAMP4-202ENST00000409472 NEURL4Q96JN8 1562 aa20.61■□□□□ 0.89
SCAMP4-202ENST00000409472 RALBP1Q15311 655 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms