RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 ZFYVE16Q7Z3T8 1539 aa24.77■■□□□ 1.56
CHTOP-205ENST00000403433 DCAF11Q8TEB1 546 aa24.76■■□□□ 1.55
CHTOP-205ENST00000403433 RTEL1-TNFRSF6BF6WH68 1400 aa24.76■■□□□ 1.55
CHTOP-205ENST00000403433 KDM2AQ9Y2K7 1162 aa24.75■■□□□ 1.55
CHTOP-205ENST00000403433 SPAG9O60271 1321 aaKnown RBP24.75■■□□□ 1.55
CHTOP-205ENST00000403433 CARD11Q9BXL7 1154 aa24.74■■□□□ 1.55
CHTOP-205ENST00000403433 PLA2R1Q13018 1463 aa24.74■■□□□ 1.55
CHTOP-205ENST00000403433 FANCAO15360 1455 aa24.73■■□□□ 1.55
CHTOP-205ENST00000403433 ARID4BQ4LE39 1312 aaPredicted RBP24.73■■□□□ 1.55
CHTOP-205ENST00000403433 PRKRIP1Q9H875 184 aaPredicted RBP24.73■■□□□ 1.55
CHTOP-205ENST00000403433 TRPM1Q7Z4N2 1603 aa24.72■■□□□ 1.55
CHTOP-205ENST00000403433 ATP10AO60312 1499 aa24.71■■□□□ 1.55
CHTOP-205ENST00000403433 INO80Q9ULG1 1556 aaPredicted RBP24.7■■□□□ 1.54
CHTOP-205ENST00000403433 PRAG1Q86YV5 1406 aa24.69■■□□□ 1.54
CHTOP-205ENST00000403433 ASXL2Q76L83 1435 aa24.69■■□□□ 1.54
CHTOP-205ENST00000403433 ROCK2O75116 1388 aaKnown RBP24.68■■□□□ 1.54
CHTOP-205ENST00000403433 ATP7AQ04656 1500 aa24.68■■□□□ 1.54
CHTOP-205ENST00000403433 A2MP01023 1474 aa24.67■■□□□ 1.54
CHTOP-205ENST00000403433 DEPDC5O75140 1603 aa24.66■■□□□ 1.54
CHTOP-205ENST00000403433 AFAP1Q8N556 730 aa24.66■■□□□ 1.54
CHTOP-205ENST00000403433 EIF2AK4Q9P2K8 1649 aaKnown RBP24.65■■□□□ 1.54
CHTOP-205ENST00000403433 ADGRL1O94910 1474 aa24.65■■□□□ 1.54
CHTOP-205ENST00000403433 POLR3GLQ9BT43 218 aa24.65■■□□□ 1.54
CHTOP-205ENST00000403433 HNRNPUQ00839 825 aaKnown RBP eCLIP24.64■■□□□ 1.53
CHTOP-205ENST00000403433 E9PCH4 1651 aa24.64■■□□□ 1.53
CHTOP-205ENST00000403433 LAMC1P11047 1609 aa24.63■■□□□ 1.53
CHTOP-205ENST00000403433 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
CHTOP-205ENST00000403433 RGL3Q3MIN7 710 aa24.63■■□□□ 1.53
CHTOP-205ENST00000403433 DHX29Q7Z478 1369 aaKnown RBP24.62■■□□□ 1.53
CHTOP-205ENST00000403433 MRS2Q9HD23 443 aa24.6■■□□□ 1.53
CHTOP-205ENST00000403433 SCAPERQ9BY12 1400 aa24.59■■□□□ 1.53
CHTOP-205ENST00000403433 ST20-MTHFSA0A0A6YYL1 179 aa24.59■■□□□ 1.53
CHTOP-205ENST00000403433 TET3O43151 1660 aa24.59■■□□□ 1.53
CHTOP-205ENST00000403433 CCDC184Q52MB2 194 aa24.59■■□□□ 1.53
CHTOP-205ENST00000403433 SPHKAPQ2M3C7 1700 aa24.59■■□□□ 1.53
CHTOP-205ENST00000403433 TRPM2O94759 1503 aa24.58■■□□□ 1.52
CHTOP-205ENST00000403433 GPRASP1Q5JY77 1395 aa24.57■■□□□ 1.52
CHTOP-205ENST00000403433 NPM1P06748 294 aaKnown RBP eCLIP24.57■■□□□ 1.52
CHTOP-205ENST00000403433 NEFLP07196 543 aa24.57■■□□□ 1.52
CHTOP-205ENST00000403433 CFAP74Q9C0B2 1584 aa24.55■■□□□ 1.52
CHTOP-205ENST00000403433 CEP152O94986 1710 aa24.55■■□□□ 1.52
CHTOP-205ENST00000403433 KANK1Q14678 1352 aa24.55■■□□□ 1.52
CHTOP-205ENST00000403433 PRDM15P57071 1507 aaPredicted RBP24.55■■□□□ 1.52
CHTOP-205ENST00000403433 VWDEQ8N2E2 1590 aa24.54■■□□□ 1.52
CHTOP-205ENST00000403433 MYT1LQ9UL68 1186 aa24.53■■□□□ 1.52
CHTOP-205ENST00000403433 FKBP8Q14318 412 aa24.53■■□□□ 1.52
CHTOP-205ENST00000403433 RNF17Q9BXT8 1623 aaKnown RBP24.51■■□□□ 1.51
CHTOP-205ENST00000403433 FAM9BQ8IZU0 186 aa24.51■■□□□ 1.51
CHTOP-205ENST00000403433 KIDINS220Q9ULH0 1771 aa24.5■■□□□ 1.51
CHTOP-205ENST00000403433 PTPRTO14522 1441 aa24.49■■□□□ 1.51
CHTOP-205ENST00000403433 ZNF518AQ6AHZ1 1483 aa24.49■■□□□ 1.51
CHTOP-205ENST00000403433 CLTCL1P53675 1640 aa24.49■■□□□ 1.51
CHTOP-205ENST00000403433 NBPF1Q3BBV0 1214 aa24.49■■□□□ 1.51
CHTOP-205ENST00000403433 MROH1Q8NDA8 1641 aa24.47■■□□□ 1.51
CHTOP-205ENST00000403433 MADDQ8WXG6 1647 aa24.47■■□□□ 1.51
CHTOP-205ENST00000403433 KIF3BO15066 747 aa24.46■■□□□ 1.51
CHTOP-205ENST00000403433 COL17A1Q9UMD9 1497 aaPredicted RBP24.44■■□□□ 1.5
CHTOP-205ENST00000403433 CD109Q6YHK3 1445 aa24.44■■□□□ 1.5
CHTOP-205ENST00000403433 CNGB1Q14028 1251 aaPredicted RBP24.42■■□□□ 1.5
CHTOP-205ENST00000403433 KTN1Q86UP2 1357 aaKnown RBP24.41■■□□□ 1.5
CHTOP-205ENST00000403433 ZBED9Q6R2W3 1325 aa24.41■■□□□ 1.5
CHTOP-205ENST00000403433 BCANQ96GW7 911 aa24.41■■□□□ 1.5
CHTOP-205ENST00000403433 EFCAB6Q5THR3 1501 aa24.4■■□□□ 1.5
CHTOP-205ENST00000403433 POGZQ7Z3K3 1410 aa24.4■■□□□ 1.5
CHTOP-205ENST00000403433 NEURL4Q96JN8 1562 aa24.39■■□□□ 1.5
CHTOP-205ENST00000403433 IQGAP1P46940 1657 aa24.38■■□□□ 1.49
CHTOP-205ENST00000403433 STAC3Q96MF2 364 aa24.38■■□□□ 1.49
CHTOP-205ENST00000403433 HECW2Q9P2P5 1572 aa24.37■■□□□ 1.49
CHTOP-205ENST00000403433 PPRC1Q5VV67 1664 aaKnown RBP24.36■■□□□ 1.49
CHTOP-205ENST00000403433 LMTK2Q8IWU2 1503 aa24.35■■□□□ 1.49
CHTOP-205ENST00000403433 TESK2Q96S53 571 aa24.35■■□□□ 1.49
CHTOP-205ENST00000403433 KIF1BO60333 1816 aa24.34■■□□□ 1.49
CHTOP-205ENST00000403433 RALBP1Q15311 655 aa24.34■■□□□ 1.49
CHTOP-205ENST00000403433 DISP3Q9P2K9 1392 aa24.34■■□□□ 1.49
CHTOP-205ENST00000403433 MLH3Q9UHC1 1453 aa24.34■■□□□ 1.49
CHTOP-205ENST00000403433 TMF1P82094 1093 aa24.32■■□□□ 1.48
CHTOP-205ENST00000403433 MYBBP1AQ9BQG0 1328 aaKnown RBP24.32■■□□□ 1.48
CHTOP-205ENST00000403433 KIAA1210Q9ULL0 1709 aa24.32■■□□□ 1.48
CHTOP-205ENST00000403433 TMC1Q8TDI8 760 aa24.31■■□□□ 1.48
CHTOP-205ENST00000403433 BRD4O60885 1362 aaPredicted RBP24.3■■□□□ 1.48
CHTOP-205ENST00000403433 NEO1Q92859 1461 aa24.3■■□□□ 1.48
CHTOP-205ENST00000403433 FRMPD1Q5SYB0 1578 aa24.29■■□□□ 1.48
CHTOP-205ENST00000403433 UGGT1Q9NYU2 1555 aa24.29■■□□□ 1.48
CHTOP-205ENST00000403433 SCAF11Q99590 1463 aaKnown RBP24.28■■□□□ 1.48
CHTOP-205ENST00000403433 ABCA6Q8N139 1617 aa24.28■■□□□ 1.48
CHTOP-205ENST00000403433 MYOM2P54296 1465 aa24.27■■□□□ 1.48
CHTOP-205ENST00000403433 MAP3K4Q9Y6R4 1608 aa24.26■■□□□ 1.47
CHTOP-205ENST00000403433 IFT172Q9UG01 1749 aa24.26■■□□□ 1.47
CHTOP-205ENST00000403433 PNISRQ8TF01 805 aaKnown RBP24.25■■□□□ 1.47
CHTOP-205ENST00000403433 PARD3Q8TEW0 1356 aa24.25■■□□□ 1.47
CHTOP-205ENST00000403433 MROH2AA6NES4 1674 aa24.25■■□□□ 1.47
CHTOP-205ENST00000403433 WASHC2CQ9Y4E1 1318 aa24.23■■□□□ 1.47
CHTOP-205ENST00000403433 EIF3AQ14152 1382 aaKnown RBP24.22■■□□□ 1.47
CHTOP-205ENST00000403433 PER1O15534 1290 aaPredicted RBP24.22■■□□□ 1.47
CHTOP-205ENST00000403433 LRPPRCP42704 1394 aaKnown RBP24.2■■□□□ 1.47
CHTOP-205ENST00000403433 NLRP13Q86W25 1043 aa24.2■■□□□ 1.46
CHTOP-205ENST00000403433 ADGRB3O60242 1522 aa24.19■■□□□ 1.46
CHTOP-205ENST00000403433 PANK3Q9H999 370 aa24.19■■□□□ 1.46
CHTOP-205ENST00000403433 SMG6Q86US8 1419 aaKnown RBP24.18■■□□□ 1.46
CHTOP-205ENST00000403433 RICTORQ6R327 1708 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms