RNA–Protein interactions for RNA: ENST00000399808.4

IFITM3-201, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene IFITM3, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-201ENST00000399808 DHX29Q7Z478 1369 aaKnown RBP24.5■■□□□ 1.51
IFITM3-201ENST00000399808 SHANK2Q9UPX8 1470 aa24.5■■□□□ 1.51
IFITM3-201ENST00000399808 SCAF1Q9H7N4 1312 aaKnown RBP24.49■■□□□ 1.51
IFITM3-201ENST00000399808 MTUS2Q5JR59 1369 aa24.49■■□□□ 1.51
IFITM3-201ENST00000399808 RTEL1-TNFRSF6BF6WH68 1400 aa24.49■■□□□ 1.51
IFITM3-201ENST00000399808 CPS1P31327 1500 aa24.49■■□□□ 1.51
IFITM3-201ENST00000399808 TNRQ92752 1358 aa24.47■■□□□ 1.51
IFITM3-201ENST00000399808 TOM1O60784 492 aa24.47■■□□□ 1.51
IFITM3-201ENST00000399808 KIF3BO15066 747 aa24.45■■□□□ 1.5
IFITM3-201ENST00000399808 ALKQ9UM73 1620 aa24.45■■□□□ 1.5
IFITM3-201ENST00000399808 VWDEQ8N2E2 1590 aa24.44■■□□□ 1.5
IFITM3-201ENST00000399808 PZPP20742 1482 aa24.44■■□□□ 1.5
IFITM3-201ENST00000399808 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.42■■□□□ 1.5
IFITM3-201ENST00000399808 KDM5DQ9BY66 1539 aa24.4■■□□□ 1.5
IFITM3-201ENST00000399808 ANKLE2Q86XL3 938 aa24.4■■□□□ 1.5
IFITM3-201ENST00000399808 EHBP1L1Q8N3D4 1523 aa24.39■■□□□ 1.49
IFITM3-201ENST00000399808 STRCP1A6NGW2 1772 aa24.39■■□□□ 1.49
IFITM3-201ENST00000399808 MIA2Q96PC5 1412 aa24.38■■□□□ 1.49
IFITM3-201ENST00000399808 MED14O60244 1454 aa24.38■■□□□ 1.49
IFITM3-201ENST00000399808 FAM135AQ9P2D6 1515 aa24.37■■□□□ 1.49
IFITM3-201ENST00000399808 DEPDC5O75140 1603 aa24.37■■□□□ 1.49
IFITM3-201ENST00000399808 THEMISQ8N1K5 641 aaPredicted RBP24.37■■□□□ 1.49
IFITM3-201ENST00000399808 WASHC2CQ9Y4E1 1318 aa24.36■■□□□ 1.49
IFITM3-201ENST00000399808 CEP162Q5TB80 1403 aa24.36■■□□□ 1.49
IFITM3-201ENST00000399808 UGGT1Q9NYU2 1555 aa24.35■■□□□ 1.49
IFITM3-201ENST00000399808 NPHP4O75161 1426 aaPredicted RBP24.35■■□□□ 1.49
IFITM3-201ENST00000399808 CCDC141Q6ZP82 1450 aa24.34■■□□□ 1.49
IFITM3-201ENST00000399808 NLRP1Q9C000 1473 aa24.34■■□□□ 1.49
IFITM3-201ENST00000399808 IQGAP1P46940 1657 aa24.32■■□□□ 1.48
IFITM3-201ENST00000399808 CAMSAP2Q08AD1 1489 aa24.31■■□□□ 1.48
IFITM3-201ENST00000399808 CFAP65Q6ZU64 1925 aaKnown RBP24.29■■□□□ 1.48
IFITM3-201ENST00000399808 RSPH4AQ5TD94 716 aa24.28■■□□□ 1.48
IFITM3-201ENST00000399808 LRRC7Q96NW7 1537 aa24.28■■□□□ 1.48
IFITM3-201ENST00000399808 NCOA2Q15596 1464 aa24.26■■□□□ 1.47
IFITM3-201ENST00000399808 PHF23Q9BUL5 403 aaPredicted RBP24.26■■□□□ 1.47
IFITM3-201ENST00000399808 ARHGEF5Q12774 1597 aa24.25■■□□□ 1.47
IFITM3-201ENST00000399808 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
IFITM3-201ENST00000399808 ZC3H13Q5T200 1668 aaKnown RBP24.24■■□□□ 1.47
IFITM3-201ENST00000399808 RNF17Q9BXT8 1623 aaKnown RBP24.23■■□□□ 1.47
IFITM3-201ENST00000399808 ABCC3O15438 1527 aa24.22■■□□□ 1.47
IFITM3-201ENST00000399808 SYNMO15061 1565 aa24.2■■□□□ 1.46
IFITM3-201ENST00000399808 XIRP1Q702N8 1843 aaKnown RBP24.19■■□□□ 1.46
IFITM3-201ENST00000399808 UBR1Q8IWV7 1749 aa24.19■■□□□ 1.46
IFITM3-201ENST00000399808 TSPY4P0CV99 314 aa24.19■■□□□ 1.46
IFITM3-201ENST00000399808 TSPY10P0CW01 314 aa24.19■■□□□ 1.46
IFITM3-201ENST00000399808 ERVK-7P63135 1459 aa24.18■■□□□ 1.46
IFITM3-201ENST00000399808 RGS17Q9UGC6 210 aaPredicted RBP24.17■■□□□ 1.46
IFITM3-201ENST00000399808 MROH1Q8NDA8 1641 aa24.17■■□□□ 1.46
IFITM3-201ENST00000399808 CEP152O94986 1710 aa24.16■■□□□ 1.46
IFITM3-201ENST00000399808 MAST1Q9Y2H9 1570 aa24.15■■□□□ 1.46
IFITM3-201ENST00000399808 EIF2AK4Q9P2K8 1649 aaKnown RBP24.13■■□□□ 1.45
IFITM3-201ENST00000399808 LTKP29376 864 aa24.12■■□□□ 1.45
IFITM3-201ENST00000399808 SCAF11Q99590 1463 aaKnown RBP24.1■■□□□ 1.45
IFITM3-201ENST00000399808 ARHGAP23Q9P227 1491 aa24.09■■□□□ 1.45
IFITM3-201ENST00000399808 SLIT1O75093 1534 aa24.07■■□□□ 1.44
IFITM3-201ENST00000399808 TXNDC2Q86VQ3 553 aa24.06■■□□□ 1.44
IFITM3-201ENST00000399808 LRRC9Q6ZRR7 1453 aa24.03■■□□□ 1.44
IFITM3-201ENST00000399808 PIK3C2BO00750 1634 aa24■■□□□ 1.43
IFITM3-201ENST00000399808 ARHGAP31Q2M1Z3 1444 aa24■■□□□ 1.43
IFITM3-201ENST00000399808 FAM135BQ49AJ0 1406 aa24■■□□□ 1.43
IFITM3-201ENST00000399808 DUOX2Q9NRD8 1548 aa24■■□□□ 1.43
IFITM3-201ENST00000399808 POTEAQ6S8J7 498 aa23.99■■□□□ 1.43
IFITM3-201ENST00000399808 PRDM15P57071 1507 aaPredicted RBP23.96■■□□□ 1.43
IFITM3-201ENST00000399808 KANK4Q5T7N3 995 aaPredicted RBP23.96■■□□□ 1.43
IFITM3-201ENST00000399808 EID1Q9Y6B2 187 aa23.96■■□□□ 1.43
IFITM3-201ENST00000399808 TMEM2Q9UHN6 1383 aa23.94■■□□□ 1.42
IFITM3-201ENST00000399808 ROBO1Q9Y6N7 1651 aa23.93■■□□□ 1.42
IFITM3-201ENST00000399808 MYOM3Q5VTT5 1437 aa23.93■■□□□ 1.42
IFITM3-201ENST00000399808 TMEM94Q12767 1356 aa23.92■■□□□ 1.42
IFITM3-201ENST00000399808 TET3O43151 1660 aa23.91■■□□□ 1.42
IFITM3-201ENST00000399808 KDM5AP29375 1690 aaKnown RBP23.91■■□□□ 1.42
IFITM3-201ENST00000399808 MAP3K1Q13233 1512 aa23.9■■□□□ 1.42
IFITM3-201ENST00000399808 RBM33Q96EV2 1170 aaKnown RBP23.9■■□□□ 1.42
IFITM3-201ENST00000399808 VPS8Q8N3P4 1428 aa23.9■■□□□ 1.42
IFITM3-201ENST00000399808 KIF15Q9NS87 1388 aa23.9■■□□□ 1.42
IFITM3-201ENST00000399808 CROCC2H7BZ55 1655 aa23.89■■□□□ 1.42
IFITM3-201ENST00000399808 KCNA6P17658 529 aa23.89■■□□□ 1.41
IFITM3-201ENST00000399808 IDI1Q13907 227 aa23.88■■□□□ 1.41
IFITM3-201ENST00000399808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.88■■□□□ 1.41
IFITM3-201ENST00000399808 RRP7BPQ9NSQ0 103 aa23.88■■□□□ 1.41
IFITM3-201ENST00000399808 ABCC5O15440 1437 aa23.87■■□□□ 1.41
IFITM3-201ENST00000399808 ERBINQ96RT1 1412 aa23.87■■□□□ 1.41
IFITM3-201ENST00000399808 SLC26A8Q96RN1 970 aa23.87■■□□□ 1.41
IFITM3-201ENST00000399808 EFCAB6Q5THR3 1501 aa23.87■■□□□ 1.41
IFITM3-201ENST00000399808 PROSER2Q86WR7 435 aaPredicted RBP23.86■■□□□ 1.41
IFITM3-201ENST00000399808 STAG3Q9UJ98 1225 aa23.85■■□□□ 1.41
IFITM3-201ENST00000399808 SETD1AO15047 1707 aaKnown RBP23.83■■□□□ 1.41
IFITM3-201ENST00000399808 NWD1Q149M9 1564 aa23.81■■□□□ 1.4
IFITM3-201ENST00000399808 LMTK2Q8IWU2 1503 aa23.8■■□□□ 1.4
IFITM3-201ENST00000399808 PHLPP1O60346 1717 aa23.79■■□□□ 1.4
IFITM3-201ENST00000399808 PTPN23Q9H3S7 1636 aa23.79■■□□□ 1.4
IFITM3-201ENST00000399808 KANK1Q14678 1352 aa23.78■■□□□ 1.4
IFITM3-201ENST00000399808 CHD2O14647 1828 aaKnown RBP23.77■■□□□ 1.4
IFITM3-201ENST00000399808 NOS1P29475 1434 aa23.77■■□□□ 1.4
IFITM3-201ENST00000399808 NKTRP30414 1462 aaKnown RBP23.77■■□□□ 1.4
IFITM3-201ENST00000399808 MYO5BQ9ULV0 1848 aa23.77■■□□□ 1.4
IFITM3-201ENST00000399808 DAPK1P53355 1430 aa23.76■■□□□ 1.39
IFITM3-201ENST00000399808 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
IFITM3-201ENST00000399808 SLAIN2Q9P270 581 aa23.76■■□□□ 1.39
IFITM3-201ENST00000399808 ADGRB3O60242 1522 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms