RNA–Protein interactions for RNA: ENST00000399808.4

IFITM3-201, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene IFITM3, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-201ENST00000399808 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
IFITM3-201ENST00000399808 ABCC9O60706 1549 aa35.31■■■■□ 3.24
IFITM3-201ENST00000399808 CCDC180Q9P1Z9 1646 aa34.81■■■■□ 3.16
IFITM3-201ENST00000399808 DNAJC5BQ9UF47 199 aa33.67■■■□□ 2.98
IFITM3-201ENST00000399808 RB1CC1Q8TDY2 1594 aa33.35■■■□□ 2.93
IFITM3-201ENST00000399808 NACADO15069 1562 aa33.01■■■□□ 2.88
IFITM3-201ENST00000399808 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.84
IFITM3-201ENST00000399808 UNC13AQ9UPW8 1703 aa32.75■■■□□ 2.83
IFITM3-201ENST00000399808 DCAF8L2P0C7V8 631 aa32.74■■■□□ 2.83
IFITM3-201ENST00000399808 BICRAQ9NZM4 1560 aa32.5■■■□□ 2.79
IFITM3-201ENST00000399808 MYO15BQ96JP2 1530 aa32.38■■■□□ 2.77
IFITM3-201ENST00000399808 CC2D2AQ9P2K1 1620 aa31.89■■■□□ 2.7
IFITM3-201ENST00000399808 SHROOM4Q9ULL8 1493 aa31.86■■■□□ 2.69
IFITM3-201ENST00000399808 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
IFITM3-201ENST00000399808 CECR2Q9BXF3 1484 aa31.83■■■□□ 2.69
IFITM3-201ENST00000399808 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
IFITM3-201ENST00000399808 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
IFITM3-201ENST00000399808 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
IFITM3-201ENST00000399808 DNAJC5Q9H3Z4 198 aa31.2■■■□□ 2.59
IFITM3-201ENST00000399808 CUX2O14529 1486 aa30.58■■■□□ 2.49
IFITM3-201ENST00000399808 NCAPD3P42695 1498 aa30.5■■■□□ 2.47
IFITM3-201ENST00000399808 ERCC6Q03468 1493 aa30.44■■■□□ 2.46
IFITM3-201ENST00000399808 ATAD2BQ9ULI0 1458 aa30.34■■■□□ 2.45
IFITM3-201ENST00000399808 NESP48681 1621 aa30.23■■■□□ 2.43
IFITM3-201ENST00000399808 HMGXB3Q12766 1538 aa30.21■■■□□ 2.43
IFITM3-201ENST00000399808 SMARCA4P51532 1647 aa30.2■■■□□ 2.43
IFITM3-201ENST00000399808 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
IFITM3-201ENST00000399808 THOC2Q8NI27 1593 aaKnown RBP30■■■□□ 2.39
IFITM3-201ENST00000399808 BAZ1BQ9UIG0 1483 aaKnown RBP29.98■■■□□ 2.39
IFITM3-201ENST00000399808 BAZ1AQ9NRL2 1556 aaPredicted RBP29.93■■■□□ 2.38
IFITM3-201ENST00000399808 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
IFITM3-201ENST00000399808 LAMC3Q9Y6N6 1575 aa29.88■■■□□ 2.37
IFITM3-201ENST00000399808 KIF21AQ7Z4S6 1674 aa29.84■■■□□ 2.37
IFITM3-201ENST00000399808 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
IFITM3-201ENST00000399808 PDS5BQ9NTI5 1447 aa29.69■■■□□ 2.34
IFITM3-201ENST00000399808 TRIM41Q8WV44 630 aa29.59■■■□□ 2.33
IFITM3-201ENST00000399808 CADPSQ9ULU8 1353 aa29.53■■■□□ 2.32
IFITM3-201ENST00000399808 MRC2Q9UBG0 1479 aa29.48■■■□□ 2.31
IFITM3-201ENST00000399808 WDR62O43379 1518 aa29.44■■■□□ 2.3
IFITM3-201ENST00000399808 WIZO95785 1651 aa29.38■■■□□ 2.29
IFITM3-201ENST00000399808 CEP164Q9UPV0 1460 aa29.26■■■□□ 2.27
IFITM3-201ENST00000399808 FANCD2Q9BXW9 1451 aa29.2■■■□□ 2.26
IFITM3-201ENST00000399808 OSCARQ8IYS5 282 aa29.13■■■□□ 2.25
IFITM3-201ENST00000399808 CFTRP13569 1480 aa29.1■■■□□ 2.25
IFITM3-201ENST00000399808 URB2Q14146 1524 aaKnown RBP29.04■■■□□ 2.24
IFITM3-201ENST00000399808 RSF1Q96T23 1441 aaPredicted RBP28.93■■■□□ 2.22
IFITM3-201ENST00000399808 TOP2AP11388 1531 aaKnown RBP28.9■■■□□ 2.22
IFITM3-201ENST00000399808 RIMBP3CA6NJZ7 1639 aa28.85■■■□□ 2.21
IFITM3-201ENST00000399808 RIMBP3BA6NNM3 1639 aa28.85■■■□□ 2.21
IFITM3-201ENST00000399808 RIMBP3Q9UFD9 1639 aa28.85■■■□□ 2.21
IFITM3-201ENST00000399808 PRDM2Q13029 1718 aa28.83■■■□□ 2.21
IFITM3-201ENST00000399808 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.19
IFITM3-201ENST00000399808 IFT140Q96RY7 1462 aa28.68■■■□□ 2.18
IFITM3-201ENST00000399808 ARHGEF11O15085 1522 aa28.68■■■□□ 2.18
IFITM3-201ENST00000399808 CCDC88BA6NC98 1476 aa28.62■■■□□ 2.17
IFITM3-201ENST00000399808 TOPBP1Q92547 1522 aa28.61■■■□□ 2.17
IFITM3-201ENST00000399808 EIF4G3O43432 1585 aaKnown RBP28.54■■■□□ 2.16
IFITM3-201ENST00000399808 CYB5RLQ6IPT4 315 aa28.51■■■□□ 2.15
IFITM3-201ENST00000399808 CHD1O14646 1710 aa28.49■■■□□ 2.15
IFITM3-201ENST00000399808 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
IFITM3-201ENST00000399808 DNMBPQ6XZF7 1577 aa28.44■■■□□ 2.14
IFITM3-201ENST00000399808 TARBP1Q13395 1621 aaKnown RBP28.43■■■□□ 2.14
IFITM3-201ENST00000399808 AQRO60306 1485 aaKnown RBP eCLIP28.42■■■□□ 2.141e-6■■■■■ 29.8
IFITM3-201ENST00000399808 ARAP1Q96P48 1450 aa28.38■■■□□ 2.13
IFITM3-201ENST00000399808 TRHP20396 242 aaPredicted RBP28.3■■■□□ 2.12
IFITM3-201ENST00000399808 FBLN2P98095 1184 aa28.29■■■□□ 2.12
IFITM3-201ENST00000399808 POLA1P09884 1462 aaPredicted RBP28.28■■■□□ 2.12
IFITM3-201ENST00000399808 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
IFITM3-201ENST00000399808 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
IFITM3-201ENST00000399808 SOGA1O94964 1423 aa28.14■■■□□ 2.1
IFITM3-201ENST00000399808 CLASP1Q7Z460 1538 aa28.11■■■□□ 2.09
IFITM3-201ENST00000399808 SNAPC4Q5SXM2 1469 aa28.08■■■□□ 2.09
IFITM3-201ENST00000399808 FGD5Q6ZNL6 1462 aa28.03■■■□□ 2.08
IFITM3-201ENST00000399808 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
IFITM3-201ENST00000399808 CHMP7Q8WUX9 453 aaPredicted RBP27.99■■■□□ 2.07
IFITM3-201ENST00000399808 SYNJ1O43426 1573 aa27.99■■■□□ 2.07
IFITM3-201ENST00000399808 MAGI1Q96QZ7 1491 aaPredicted RBP27.97■■■□□ 2.07
IFITM3-201ENST00000399808 CUX1P39880 1505 aa27.96■■■□□ 2.07
IFITM3-201ENST00000399808 GRIN2BQ13224 1484 aa27.93■■■□□ 2.06
IFITM3-201ENST00000399808 SYNJ2O15056 1496 aa27.89■■■□□ 2.06
IFITM3-201ENST00000399808 PBRM1Q86U86 1689 aa27.84■■■□□ 2.05
IFITM3-201ENST00000399808 AEBP2Q6ZN18 517 aaPredicted RBP27.81■■■□□ 2.04
IFITM3-201ENST00000399808 GAPVD1Q14C86 1478 aa27.81■■■□□ 2.04
IFITM3-201ENST00000399808 ABCA5Q8WWZ7 1642 aa27.7■■■□□ 2.03
IFITM3-201ENST00000399808 ERCC6L2Q5T890 1561 aa27.68■■■□□ 2.02
IFITM3-201ENST00000399808 ABCA10Q8WWZ4 1543 aa27.67■■■□□ 2.02
IFITM3-201ENST00000399808 GRIN2AQ12879 1464 aa27.58■■■□□ 2.01
IFITM3-201ENST00000399808 CEP170Q5SW79 1584 aa27.55■■■□□ 2
IFITM3-201ENST00000399808 NUP160Q12769 1436 aa27.52■■■□□ 2
IFITM3-201ENST00000399808 ADAMTS12P58397 1594 aa27.51■■□□□ 1.99
IFITM3-201ENST00000399808 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
IFITM3-201ENST00000399808 KIF13AQ9H1H9 1805 aa27.46■■□□□ 1.99
IFITM3-201ENST00000399808 WRNQ14191 1432 aaPredicted RBP eCLIP27.44■■□□□ 1.98
IFITM3-201ENST00000399808 FHAD1B1AJZ9 1412 aa27.39■■□□□ 1.97
IFITM3-201ENST00000399808 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
IFITM3-201ENST00000399808 TOP2BQ02880 1626 aa27.36■■□□□ 1.97
IFITM3-201ENST00000399808 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
IFITM3-201ENST00000399808 PRG4Q92954 1404 aaPredicted RBP27.29■■□□□ 1.96
IFITM3-201ENST00000399808 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
IFITM3-201ENST00000399808 JPH4Q96JJ6 628 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms