RNA–Protein interactions for RNA: ENST00000399687.3

ABCD1P4-201, Transcript of ATP binding cassette subfamily D member 1 pseudogene 4, humanhuman

BASIC

Gene ABCD1P4, Length 604 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P4-201ENST00000399687 KIF3BO15066 747 aa20.8■□□□□ 0.92
ABCD1P4-201ENST00000399687 CHIC2Q9UKJ5 165 aa20.8■□□□□ 0.92
ABCD1P4-201ENST00000399687 KDM5DQ9BY66 1539 aa20.79■□□□□ 0.92
ABCD1P4-201ENST00000399687 RRP7BPQ9NSQ0 103 aa20.79■□□□□ 0.92
ABCD1P4-201ENST00000399687 GGT6Q6P531 493 aa20.78■□□□□ 0.92
ABCD1P4-201ENST00000399687 CLTCQ00610 1675 aaKnown RBP20.77■□□□□ 0.92
ABCD1P4-201ENST00000399687 ITGAEP38570 1179 aa20.77■□□□□ 0.92
ABCD1P4-201ENST00000399687 PRDM15P57071 1507 aaPredicted RBP20.75■□□□□ 0.91
ABCD1P4-201ENST00000399687 ANKRD50Q9ULJ7 1429 aa20.75■□□□□ 0.91
ABCD1P4-201ENST00000399687 DEPDC5O75140 1603 aa20.75■□□□□ 0.91
ABCD1P4-201ENST00000399687 KANK1Q14678 1352 aa20.74■□□□□ 0.91
ABCD1P4-201ENST00000399687 C3P01024 1663 aa20.73■□□□□ 0.91
ABCD1P4-201ENST00000399687 PTPRKQ15262 1439 aa20.71■□□□□ 0.91
ABCD1P4-201ENST00000399687 GCC2Q8IWJ2 1684 aa20.71■□□□□ 0.91
ABCD1P4-201ENST00000399687 WASHC2CQ9Y4E1 1318 aa20.71■□□□□ 0.91
ABCD1P4-201ENST00000399687 MROH1Q8NDA8 1641 aa20.68■□□□□ 0.9
ABCD1P4-201ENST00000399687 ABCC3O15438 1527 aa20.68■□□□□ 0.9
ABCD1P4-201ENST00000399687 PREX1Q8TCU6 1659 aa20.67■□□□□ 0.9
ABCD1P4-201ENST00000399687 NPATQ14207 1427 aa20.67■□□□□ 0.9
ABCD1P4-201ENST00000399687 ZMYM3Q14202 1370 aa20.66■□□□□ 0.9
ABCD1P4-201ENST00000399687 UNC13BO14795 1591 aa20.66■□□□□ 0.9
ABCD1P4-201ENST00000399687 SETD1BQ9UPS6 1966 aaKnown RBP20.65■□□□□ 0.9
ABCD1P4-201ENST00000399687 CEP152O94986 1710 aa20.65■□□□□ 0.9
ABCD1P4-201ENST00000399687 CAMSAP1Q5T5Y3 1602 aa20.65■□□□□ 0.9
ABCD1P4-201ENST00000399687 HFM1A2PYH4 1435 aa20.64■□□□□ 0.89
ABCD1P4-201ENST00000399687 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
ABCD1P4-201ENST00000399687 PZPP20742 1482 aa20.63■□□□□ 0.89
ABCD1P4-201ENST00000399687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.61■□□□□ 0.89
ABCD1P4-201ENST00000399687 LMTK2Q8IWU2 1503 aa20.61■□□□□ 0.89
ABCD1P4-201ENST00000399687 UHRF1BP1Q6BDS2 1440 aa20.61■□□□□ 0.89
ABCD1P4-201ENST00000399687 VWDEQ8N2E2 1590 aa20.6■□□□□ 0.89
ABCD1P4-201ENST00000399687 ACIN1Q9UKV3 1341 aaKnown RBP20.6■□□□□ 0.89
ABCD1P4-201ENST00000399687 NAIPQ13075 1403 aa20.59■□□□□ 0.89
ABCD1P4-201ENST00000399687 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.88
ABCD1P4-201ENST00000399687 TET3O43151 1660 aa20.58■□□□□ 0.88
ABCD1P4-201ENST00000399687 IQGAP3Q86VI3 1631 aa20.57■□□□□ 0.88
ABCD1P4-201ENST00000399687 CEBPAP49715 358 aaPredicted RBP20.57■□□□□ 0.88
ABCD1P4-201ENST00000399687 ARHGAP31Q2M1Z3 1444 aa20.57■□□□□ 0.88
ABCD1P4-201ENST00000399687 MYO3AQ8NEV4 1616 aa20.56■□□□□ 0.88
ABCD1P4-201ENST00000399687 RPRD2Q5VT52 1461 aaKnown RBP20.55■□□□□ 0.88
ABCD1P4-201ENST00000399687 LMTK3Q96Q04 1460 aa20.54■□□□□ 0.88
ABCD1P4-201ENST00000399687 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
ABCD1P4-201ENST00000399687 SPATA31D1Q6ZQQ2 1576 aa20.52■□□□□ 0.88
ABCD1P4-201ENST00000399687 NUP155O75694 1391 aa20.52■□□□□ 0.88
ABCD1P4-201ENST00000399687 TNRQ92752 1358 aa20.52■□□□□ 0.88
ABCD1P4-201ENST00000399687 NLRP1Q9C000 1473 aa20.51■□□□□ 0.87
ABCD1P4-201ENST00000399687 ERVK-7P63135 1459 aa20.5■□□□□ 0.87
ABCD1P4-201ENST00000399687 CEP170BQ9Y4F5 1589 aaPredicted RBP20.5■□□□□ 0.87
ABCD1P4-201ENST00000399687 CFAP65Q6ZU64 1925 aaKnown RBP20.46■□□□□ 0.87
ABCD1P4-201ENST00000399687 SETD5Q9C0A6 1442 aa20.45■□□□□ 0.86
ABCD1P4-201ENST00000399687 A2ML1A8K2U0 1454 aa20.45■□□□□ 0.86
ABCD1P4-201ENST00000399687 E9PCH4 1651 aa20.43■□□□□ 0.86
ABCD1P4-201ENST00000399687 TRIM52Q96A61 297 aa20.43■□□□□ 0.86
ABCD1P4-201ENST00000399687 FBXO31Q5XUX0 539 aaPredicted RBP20.42■□□□□ 0.86
ABCD1P4-201ENST00000399687 KDM5AP29375 1690 aaKnown RBP20.4■□□□□ 0.86
ABCD1P4-201ENST00000399687 UGGT1Q9NYU2 1555 aa20.39■□□□□ 0.85
ABCD1P4-201ENST00000399687 NOS1P29475 1434 aa20.38■□□□□ 0.85
ABCD1P4-201ENST00000399687 SPHKAPQ2M3C7 1700 aa20.38■□□□□ 0.85
ABCD1P4-201ENST00000399687 PLA2R1Q13018 1463 aa20.37■□□□□ 0.85
ABCD1P4-201ENST00000399687 SYNMO15061 1565 aa20.37■□□□□ 0.85
ABCD1P4-201ENST00000399687 SLC52A1Q9NWF4 448 aa20.36■□□□□ 0.85
ABCD1P4-201ENST00000399687 RAB3GAP2Q9H2M9 1393 aa20.35■□□□□ 0.85
ABCD1P4-201ENST00000399687 THEMISQ8N1K5 641 aaPredicted RBP20.35■□□□□ 0.85
ABCD1P4-201ENST00000399687 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
ABCD1P4-201ENST00000399687 UBR1Q8IWV7 1749 aa20.34■□□□□ 0.85
ABCD1P4-201ENST00000399687 STAG3Q9UJ98 1225 aa20.34■□□□□ 0.85
ABCD1P4-201ENST00000399687 HSPA2P54652 639 aa20.33■□□□□ 0.85
ABCD1P4-201ENST00000399687 DMRT2Q9Y5R5 561 aa20.33■□□□□ 0.85
ABCD1P4-201ENST00000399687 PIK3C2BO00750 1634 aa20.33■□□□□ 0.84
ABCD1P4-201ENST00000399687 POLR1AO95602 1720 aaPredicted RBP20.33■□□□□ 0.84
ABCD1P4-201ENST00000399687 ADGRB3O60242 1522 aa20.32■□□□□ 0.84
ABCD1P4-201ENST00000399687 HRCP23327 699 aa20.32■□□□□ 0.84
ABCD1P4-201ENST00000399687 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
ABCD1P4-201ENST00000399687 TRPM2O94759 1503 aa20.31■□□□□ 0.84
ABCD1P4-201ENST00000399687 PKD2Q13563 968 aa20.29■□□□□ 0.84
ABCD1P4-201ENST00000399687 PTPRTO14522 1441 aa20.27■□□□□ 0.84
ABCD1P4-201ENST00000399687 STRCQ7RTU9 1775 aa20.27■□□□□ 0.84
ABCD1P4-201ENST00000399687 SLIT1O75093 1534 aa20.24■□□□□ 0.83
ABCD1P4-201ENST00000399687 IDI1Q13907 227 aa20.24■□□□□ 0.83
ABCD1P4-201ENST00000399687 ANKLE2Q86XL3 938 aa20.24■□□□□ 0.83
ABCD1P4-201ENST00000399687 MPHOSPH9Q99550 1183 aa20.24■□□□□ 0.83
ABCD1P4-201ENST00000399687 EID1Q9Y6B2 187 aa20.24■□□□□ 0.83
ABCD1P4-201ENST00000399687 KIF1BO60333 1816 aa20.24■□□□□ 0.83
ABCD1P4-201ENST00000399687 TMEM131LA2VDJ0 1609 aa20.23■□□□□ 0.83
ABCD1P4-201ENST00000399687 HDGFP51858 240 aaKnown RBP20.22■□□□□ 0.83
ABCD1P4-201ENST00000399687 CCDC144AA2RUR9 1427 aa20.21■□□□□ 0.83
ABCD1P4-201ENST00000399687 SCAF11Q99590 1463 aaKnown RBP20.21■□□□□ 0.83
ABCD1P4-201ENST00000399687 ARHGAP23Q9P227 1491 aa20.21■□□□□ 0.83
ABCD1P4-201ENST00000399687 TMEM2Q9UHN6 1383 aa20.21■□□□□ 0.83
ABCD1P4-201ENST00000399687 CLTCL1P53675 1640 aa20.2■□□□□ 0.82
ABCD1P4-201ENST00000399687 MYO5BQ9ULV0 1848 aa20.19■□□□□ 0.82
ABCD1P4-201ENST00000399687 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
ABCD1P4-201ENST00000399687 CHGAP10645 457 aaKnown RBP20.18■□□□□ 0.82
ABCD1P4-201ENST00000399687 MED14O60244 1454 aa20.17■□□□□ 0.82
ABCD1P4-201ENST00000399687 NEURL4Q96JN8 1562 aa20.17■□□□□ 0.82
ABCD1P4-201ENST00000399687 PPP1R15AO75807 674 aaPredicted RBP20.15■□□□□ 0.82
ABCD1P4-201ENST00000399687 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.15■□□□□ 0.82
ABCD1P4-201ENST00000399687 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
ABCD1P4-201ENST00000399687 NPHP4O75161 1426 aaPredicted RBP20.15■□□□□ 0.82
ABCD1P4-201ENST00000399687 TXNDC2Q86VQ3 553 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms