RNA–Protein interactions for RNA: ENST00000398361.7

GPM6B-204, Transcript of glycoprotein M6B, humanhuman

TSL 2 BASIC

Gene GPM6B, Length 1,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-204ENST00000398361 ABCC5O15440 1437 aa29.45■■■□□ 2.3
GPM6B-204ENST00000398361 ZNF142P52746 1687 aaPredicted RBP29.44■■■□□ 2.3
GPM6B-204ENST00000398361 PTPRKQ15262 1439 aa29.44■■■□□ 2.3
GPM6B-204ENST00000398361 DAPK1P53355 1430 aa29.43■■■□□ 2.3
GPM6B-204ENST00000398361 SHANK2Q9UPX8 1470 aa29.42■■■□□ 2.3
GPM6B-204ENST00000398361 KIF3BO15066 747 aa29.42■■■□□ 2.3
GPM6B-204ENST00000398361 FAM135AQ9P2D6 1515 aa29.41■■■□□ 2.3
GPM6B-204ENST00000398361 PTPRTO14522 1441 aa29.4■■■□□ 2.3
GPM6B-204ENST00000398361 NCOA1Q15788 1441 aa29.4■■■□□ 2.3
GPM6B-204ENST00000398361 FAM50AQ14320 339 aaKnown RBP29.4■■■□□ 2.3
GPM6B-204ENST00000398361 CAMSAP1Q5T5Y3 1602 aa29.4■■■□□ 2.3
GPM6B-204ENST00000398361 CERKQ8TCT0 537 aa29.39■■■□□ 2.3
GPM6B-204ENST00000398361 KDM5DQ9BY66 1539 aa29.39■■■□□ 2.3
GPM6B-204ENST00000398361 CEP170BQ9Y4F5 1589 aaPredicted RBP29.38■■■□□ 2.29
GPM6B-204ENST00000398361 RNF17Q9BXT8 1623 aaKnown RBP29.32■■■□□ 2.28
GPM6B-204ENST00000398361 EIF2AK4Q9P2K8 1649 aaKnown RBP29.32■■■□□ 2.28
GPM6B-204ENST00000398361 WASHC2CQ9Y4E1 1318 aa29.3■■■□□ 2.28
GPM6B-204ENST00000398361 PZPP20742 1482 aa29.29■■■□□ 2.28
GPM6B-204ENST00000398361 DUOX2Q9NRD8 1548 aa29.29■■■□□ 2.28
GPM6B-204ENST00000398361 PLA2R1Q13018 1463 aa29.28■■■□□ 2.28
GPM6B-204ENST00000398361 ZC3H13Q5T200 1668 aaKnown RBP29.28■■■□□ 2.28
GPM6B-204ENST00000398361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.27■■■□□ 2.28
GPM6B-204ENST00000398361 SOCS7O14512 581 aa29.27■■■□□ 2.28
GPM6B-204ENST00000398361 CHIC2Q9UKJ5 165 aa29.27■■■□□ 2.28
GPM6B-204ENST00000398361 A2ML1A8K2U0 1454 aa29.27■■■□□ 2.28
GPM6B-204ENST00000398361 ANKRD30AQ9BXX3 1397 aa29.26■■■□□ 2.28
GPM6B-204ENST00000398361 KIF15Q9NS87 1388 aa29.26■■■□□ 2.28
GPM6B-204ENST00000398361 ADGRL2O95490 1459 aa29.24■■■□□ 2.27
GPM6B-204ENST00000398361 RRP7BPQ9NSQ0 103 aa29.24■■■□□ 2.27
GPM6B-204ENST00000398361 TNRQ92752 1358 aa29.24■■■□□ 2.27
GPM6B-204ENST00000398361 RRBP1Q9P2E9 1410 aaKnown RBP29.23■■■□□ 2.27
GPM6B-204ENST00000398361 NCKAP5LQ9HCH0 1330 aa29.22■■■□□ 2.27
GPM6B-204ENST00000398361 FBXO31Q5XUX0 539 aaPredicted RBP29.22■■■□□ 2.27
GPM6B-204ENST00000398361 PKD2Q13563 968 aa29.21■■■□□ 2.27
GPM6B-204ENST00000398361 ABCC3O15438 1527 aa29.2■■■□□ 2.27
GPM6B-204ENST00000398361 CEP152O94986 1710 aa29.2■■■□□ 2.26
GPM6B-204ENST00000398361 ERBINQ96RT1 1412 aa29.2■■■□□ 2.26
GPM6B-204ENST00000398361 LTBP4Q8N2S1 1624 aa29.19■■■□□ 2.26
GPM6B-204ENST00000398361 MROH1Q8NDA8 1641 aa29.19■■■□□ 2.26
GPM6B-204ENST00000398361 POLR1AO95602 1720 aaPredicted RBP29.18■■■□□ 2.26
GPM6B-204ENST00000398361 CFAP65Q6ZU64 1925 aaKnown RBP29.15■■■□□ 2.26
GPM6B-204ENST00000398361 NLRP1Q9C000 1473 aa29.13■■■□□ 2.25
GPM6B-204ENST00000398361 ROCK1Q13464 1354 aa29.12■■■□□ 2.25
GPM6B-204ENST00000398361 ITGAEP38570 1179 aa29.11■■■□□ 2.25
GPM6B-204ENST00000398361 SPATA31D1Q6ZQQ2 1576 aa29.1■■■□□ 2.25
GPM6B-204ENST00000398361 IQSEC2Q5JU85 1478 aa29.1■■■□□ 2.25
GPM6B-204ENST00000398361 PRDM15P57071 1507 aaPredicted RBP29.1■■■□□ 2.25
GPM6B-204ENST00000398361 DEPDC5O75140 1603 aa29.07■■■□□ 2.24
GPM6B-204ENST00000398361 UGGT1Q9NYU2 1555 aa29.07■■■□□ 2.24
GPM6B-204ENST00000398361 ERVK-7P63135 1459 aa29.06■■■□□ 2.24
GPM6B-204ENST00000398361 ANKRD50Q9ULJ7 1429 aa29.05■■■□□ 2.24
GPM6B-204ENST00000398361 NEURL4Q96JN8 1562 aa29.05■■■□□ 2.24
GPM6B-204ENST00000398361 DISP3Q9P2K9 1392 aa29.04■■■□□ 2.24
GPM6B-204ENST00000398361 ZNF335Q9H4Z2 1342 aaPredicted RBP29.04■■■□□ 2.24
GPM6B-204ENST00000398361 ILDR2Q71H61 639 aa29.04■■■□□ 2.24
GPM6B-204ENST00000398361 THEMISQ8N1K5 641 aaPredicted RBP29.04■■■□□ 2.24
GPM6B-204ENST00000398361 ANKLE2Q86XL3 938 aa28.99■■■□□ 2.23
GPM6B-204ENST00000398361 KANK1Q14678 1352 aa28.98■■■□□ 2.23
GPM6B-204ENST00000398361 ARHGAP31Q2M1Z3 1444 aa28.97■■■□□ 2.23
GPM6B-204ENST00000398361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.97■■■□□ 2.23
GPM6B-204ENST00000398361 UBR1Q8IWV7 1749 aa28.96■■■□□ 2.23
GPM6B-204ENST00000398361 VWDEQ8N2E2 1590 aa28.94■■■□□ 2.22
GPM6B-204ENST00000398361 IQGAP1P46940 1657 aa28.93■■■□□ 2.22
GPM6B-204ENST00000398361 MED14O60244 1454 aa28.91■■■□□ 2.22
GPM6B-204ENST00000398361 NPHP4O75161 1426 aaPredicted RBP28.91■■■□□ 2.22
GPM6B-204ENST00000398361 UNC13BO14795 1591 aa28.91■■■□□ 2.22
GPM6B-204ENST00000398361 LMTK2Q8IWU2 1503 aa28.9■■■□□ 2.22
GPM6B-204ENST00000398361 CPS1P31327 1500 aa28.88■■■□□ 2.21
GPM6B-204ENST00000398361 GCC2Q8IWJ2 1684 aa28.87■■■□□ 2.21
GPM6B-204ENST00000398361 NAIPQ13075 1403 aa28.85■■■□□ 2.21
GPM6B-204ENST00000398361 PIK3C2BO00750 1634 aa28.84■■■□□ 2.21
GPM6B-204ENST00000398361 EFCAB6Q5THR3 1501 aa28.83■■■□□ 2.21
GPM6B-204ENST00000398361 UBAP1LF5GYI3 381 aa28.82■■■□□ 2.2
GPM6B-204ENST00000398361 HFM1A2PYH4 1435 aa28.82■■■□□ 2.2
GPM6B-204ENST00000398361 TET3O43151 1660 aa28.8■■■□□ 2.2
GPM6B-204ENST00000398361 KDM5AP29375 1690 aaKnown RBP28.8■■■□□ 2.2
GPM6B-204ENST00000398361 SLIT1O75093 1534 aa28.79■■■□□ 2.2
GPM6B-204ENST00000398361 SCAF11Q99590 1463 aaKnown RBP28.79■■■□□ 2.2
GPM6B-204ENST00000398361 IQGAP3Q86VI3 1631 aa28.79■■■□□ 2.2
GPM6B-204ENST00000398361 ARHGAP23Q9P227 1491 aa28.78■■■□□ 2.2
GPM6B-204ENST00000398361 SYNMO15061 1565 aa28.77■■■□□ 2.2
GPM6B-204ENST00000398361 NUP155O75694 1391 aa28.75■■■□□ 2.19
GPM6B-204ENST00000398361 STRCP1A6NGW2 1772 aa28.75■■■□□ 2.19
GPM6B-204ENST00000398361 STAG3Q9UJ98 1225 aa28.74■■■□□ 2.19
GPM6B-204ENST00000398361 RPRD2Q5VT52 1461 aaKnown RBP28.72■■■□□ 2.19
GPM6B-204ENST00000398361 NOS1P29475 1434 aa28.72■■■□□ 2.19
GPM6B-204ENST00000398361 TXNDC2Q86VQ3 553 aa28.72■■■□□ 2.19
GPM6B-204ENST00000398361 EID1Q9Y6B2 187 aa28.71■■■□□ 2.19
GPM6B-204ENST00000398361 LTKP29376 864 aa28.7■■■□□ 2.18
GPM6B-204ENST00000398361 IDI1Q13907 227 aa28.69■■■□□ 2.18
GPM6B-204ENST00000398361 TMEM2Q9UHN6 1383 aa28.69■■■□□ 2.18
GPM6B-204ENST00000398361 ADGRB3O60242 1522 aa28.68■■■□□ 2.18
GPM6B-204ENST00000398361 E9PCH4 1651 aa28.67■■■□□ 2.18
GPM6B-204ENST00000398361 TOM1O60784 492 aa28.66■■■□□ 2.18
GPM6B-204ENST00000398361 MYO5BQ9ULV0 1848 aa28.64■■■□□ 2.17
GPM6B-204ENST00000398361 SLC52A1Q9NWF4 448 aa28.63■■■□□ 2.17
GPM6B-204ENST00000398361 LRRC7Q96NW7 1537 aa28.63■■■□□ 2.17
GPM6B-204ENST00000398361 SCAF1Q9H7N4 1312 aaKnown RBP28.62■■■□□ 2.17
GPM6B-204ENST00000398361 TRIM52Q96A61 297 aa28.6■■■□□ 2.17
GPM6B-204ENST00000398361 PIP4K2BP78356 416 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms