RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 TIAM1Q13009 1591 aa21.84■■□□□ 1.09
SEC13-205ENST00000397101 SHANK2Q9UPX8 1470 aa21.83■■□□□ 1.09
SEC13-205ENST00000397101 ZNF644Q9H582 1327 aaPredicted RBP21.83■■□□□ 1.09
SEC13-205ENST00000397101 NEURL4Q96JN8 1562 aa21.83■■□□□ 1.09
SEC13-205ENST00000397101 CEP162Q5TB80 1403 aa21.83■■□□□ 1.09
SEC13-205ENST00000397101 EHBP1L1Q8N3D4 1523 aa21.82■■□□□ 1.08
SEC13-205ENST00000397101 HSPA1LP34931 641 aa21.82■■□□□ 1.08
SEC13-205ENST00000397101 RSPH4AQ5TD94 716 aa21.82■■□□□ 1.08
SEC13-205ENST00000397101 KDM5DQ9BY66 1539 aa21.81■■□□□ 1.08
SEC13-205ENST00000397101 POLR1AO95602 1720 aaPredicted RBP21.81■■□□□ 1.08
SEC13-205ENST00000397101 ANKLE2Q86XL3 938 aa21.8■■□□□ 1.08
SEC13-205ENST00000397101 THEMISQ8N1K5 641 aaPredicted RBP21.79■■□□□ 1.08
SEC13-205ENST00000397101 MED1Q15648 1581 aaPredicted RBP21.78■■□□□ 1.08
SEC13-205ENST00000397101 MED14O60244 1454 aa21.78■■□□□ 1.08
SEC13-205ENST00000397101 NLRP1Q9C000 1473 aa21.78■■□□□ 1.08
SEC13-205ENST00000397101 KIF3BO15066 747 aa21.78■■□□□ 1.08
SEC13-205ENST00000397101 FBXO31Q5XUX0 539 aaPredicted RBP21.78■■□□□ 1.08
SEC13-205ENST00000397101 CCDC141Q6ZP82 1450 aa21.77■■□□□ 1.08
SEC13-205ENST00000397101 MIA2Q96PC5 1412 aa21.77■■□□□ 1.08
SEC13-205ENST00000397101 WASHC2CQ9Y4E1 1318 aa21.76■■□□□ 1.07
SEC13-205ENST00000397101 VWDEQ8N2E2 1590 aa21.75■■□□□ 1.07
SEC13-205ENST00000397101 PIP4K2BP78356 416 aa21.75■■□□□ 1.07
SEC13-205ENST00000397101 DEPDC5O75140 1603 aa21.75■■□□□ 1.07
SEC13-205ENST00000397101 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
SEC13-205ENST00000397101 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
SEC13-205ENST00000397101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.74■■□□□ 1.071e-6■■■■□ 25.4
SEC13-205ENST00000397101 NPHP4O75161 1426 aaPredicted RBP21.72■■□□□ 1.07
SEC13-205ENST00000397101 UGGT1Q9NYU2 1555 aa21.72■■□□□ 1.07
SEC13-205ENST00000397101 CAMSAP2Q08AD1 1489 aa21.69■■□□□ 1.06
SEC13-205ENST00000397101 ALKQ9UM73 1620 aa21.69■■□□□ 1.06
SEC13-205ENST00000397101 ARHGEF5Q12774 1597 aa21.67■■□□□ 1.06
SEC13-205ENST00000397101 NCOA2Q15596 1464 aa21.67■■□□□ 1.06
SEC13-205ENST00000397101 TSPY4P0CV99 314 aa21.66■■□□□ 1.06
SEC13-205ENST00000397101 TSPY10P0CW01 314 aa21.66■■□□□ 1.06
SEC13-205ENST00000397101 IQGAP1P46940 1657 aa21.64■■□□□ 1.05
SEC13-205ENST00000397101 PHF23Q9BUL5 403 aaPredicted RBP21.63■■□□□ 1.05
SEC13-205ENST00000397101 RNF17Q9BXT8 1623 aaKnown RBP21.62■■□□□ 1.05
SEC13-205ENST00000397101 LRRC7Q96NW7 1537 aa21.62■■□□□ 1.05
SEC13-205ENST00000397101 SYNMO15061 1565 aa21.61■■□□□ 1.05
SEC13-205ENST00000397101 ZC3H13Q5T200 1668 aaKnown RBP21.61■■□□□ 1.05
SEC13-205ENST00000397101 ABCC3O15438 1527 aa21.6■■□□□ 1.05
SEC13-205ENST00000397101 ERVK-7P63135 1459 aa21.58■■□□□ 1.05
SEC13-205ENST00000397101 MAST1Q9Y2H9 1570 aa21.58■■□□□ 1.05
SEC13-205ENST00000397101 EIF2AK4Q9P2K8 1649 aaKnown RBP21.57■■□□□ 1.04
SEC13-205ENST00000397101 STRCP1A6NGW2 1772 aa21.56■■□□□ 1.04
SEC13-205ENST00000397101 SCAF11Q99590 1463 aaKnown RBP21.52■■□□□ 1.04
SEC13-205ENST00000397101 ARHGAP23Q9P227 1491 aa21.52■■□□□ 1.03
SEC13-205ENST00000397101 SLIT1O75093 1534 aa21.51■■□□□ 1.03
SEC13-205ENST00000397101 MROH1Q8NDA8 1641 aa21.51■■□□□ 1.03
SEC13-205ENST00000397101 ARHGAP31Q2M1Z3 1444 aa21.5■■□□□ 1.03
SEC13-205ENST00000397101 UBR1Q8IWV7 1749 aa21.49■■□□□ 1.03
SEC13-205ENST00000397101 LRRC9Q6ZRR7 1453 aa21.48■■□□□ 1.03
SEC13-205ENST00000397101 DUOX2Q9NRD8 1548 aa21.46■■□□□ 1.03
SEC13-205ENST00000397101 LTKP29376 864 aa21.46■■□□□ 1.03
SEC13-205ENST00000397101 TXNDC2Q86VQ3 553 aa21.46■■□□□ 1.03
SEC13-205ENST00000397101 FAM135BQ49AJ0 1406 aa21.45■■□□□ 1.02
SEC13-205ENST00000397101 RGS17Q9UGC6 210 aaPredicted RBP21.44■■□□□ 1.02
SEC13-205ENST00000397101 MYOM3Q5VTT5 1437 aa21.44■■□□□ 1.02
SEC13-205ENST00000397101 EID1Q9Y6B2 187 aa21.43■■□□□ 1.02
SEC13-205ENST00000397101 PRDM15P57071 1507 aaPredicted RBP21.42■■□□□ 1.02
SEC13-205ENST00000397101 MAP3K1Q13233 1512 aa21.41■■□□□ 1.02
SEC13-205ENST00000397101 CEP152O94986 1710 aa21.41■■□□□ 1.02
SEC13-205ENST00000397101 VPS8Q8N3P4 1428 aa21.4■■□□□ 1.02
SEC13-205ENST00000397101 ERBINQ96RT1 1412 aa21.4■■□□□ 1.02
SEC13-205ENST00000397101 TMEM2Q9UHN6 1383 aa21.39■■□□□ 1.02
SEC13-205ENST00000397101 XIRP1Q702N8 1843 aaKnown RBP21.37■■□□□ 1.01
SEC13-205ENST00000397101 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
SEC13-205ENST00000397101 KIF15Q9NS87 1388 aa21.36■■□□□ 1.01
SEC13-205ENST00000397101 KDM5AP29375 1690 aaKnown RBP21.36■■□□□ 1.01
SEC13-205ENST00000397101 CFAP65Q6ZU64 1925 aaKnown RBP21.34■■□□□ 1.01
SEC13-205ENST00000397101 KCNA6P17658 529 aa21.34■■□□□ 1.01
SEC13-205ENST00000397101 TMEM94Q12767 1356 aa21.33■■□□□ 1
SEC13-205ENST00000397101 KANK4Q5T7N3 995 aaPredicted RBP21.32■■□□□ 1
SEC13-205ENST00000397101 LMTK2Q8IWU2 1503 aa21.32■■□□□ 1
SEC13-205ENST00000397101 PIK3C2BO00750 1634 aa21.32■■□□□ 1
SEC13-205ENST00000397101 ABCC5O15440 1437 aa21.31■■□□□ 1
SEC13-205ENST00000397101 KANK1Q14678 1352 aa21.31■■□□□ 1
SEC13-205ENST00000397101 EFCAB6Q5THR3 1501 aa21.3■■□□□ 1
SEC13-205ENST00000397101 STAG3Q9UJ98 1225 aa21.3■■□□□ 1
SEC13-205ENST00000397101 TET3O43151 1660 aa21.3■■□□□ 1
SEC13-205ENST00000397101 IDI1Q13907 227 aa21.29■■□□□ 1
SEC13-205ENST00000397101 POTEAQ6S8J7 498 aa21.28■■□□□ 1
SEC13-205ENST00000397101 NKTRP30414 1462 aaKnown RBP21.27■■□□□ 1
SEC13-205ENST00000397101 RRP7BPQ9NSQ0 103 aa21.27■■□□□ 1
SEC13-205ENST00000397101 CROCC2H7BZ55 1655 aa21.26■□□□□ 0.99
SEC13-205ENST00000397101 NOS1P29475 1434 aa21.26■□□□□ 0.99
SEC13-205ENST00000397101 ROBO1Q9Y6N7 1651 aa21.25■□□□□ 0.99
SEC13-205ENST00000397101 NWD1Q149M9 1564 aa21.25■□□□□ 0.99
SEC13-205ENST00000397101 PROSER2Q86WR7 435 aaPredicted RBP21.25■□□□□ 0.99
SEC13-205ENST00000397101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.24■□□□□ 0.99
SEC13-205ENST00000397101 SLC52A1Q9NWF4 448 aa21.24■□□□□ 0.99
SEC13-205ENST00000397101 DAPK1P53355 1430 aa21.23■□□□□ 0.99
SEC13-205ENST00000397101 SLC26A8Q96RN1 970 aa21.22■□□□□ 0.99
SEC13-205ENST00000397101 ADGRB3O60242 1522 aa21.21■□□□□ 0.99
SEC13-205ENST00000397101 PTPN23Q9H3S7 1636 aa21.21■□□□□ 0.99
SEC13-205ENST00000397101 MSH6P52701 1360 aa21.21■□□□□ 0.99
SEC13-205ENST00000397101 ANKRD30AQ9BXX3 1397 aa21.21■□□□□ 0.99
SEC13-205ENST00000397101 JCADQ9P266 1359 aa21.19■□□□□ 0.98
SEC13-205ENST00000397101 SLAIN2Q9P270 581 aa21.18■□□□□ 0.98
SEC13-205ENST00000397101 NCOA3Q9Y6Q9 1424 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms