RNA–Protein interactions for RNA: ENST00000397090.4

FGFR1-205, Transcript of fibroblast growth factor receptor 1, human

TSL 2

Gene FGFR1, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-205	ENST00000397090	MAST1	Q9Y2H9	1570 aa		32.92	■■■□□ 2.86
FGFR1-205	ENST00000397090	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.92	■■■□□ 2.86
FGFR1-205	ENST00000397090	ABCC5	O15440	1437 aa		32.92	■■■□□ 2.86
FGFR1-205	ENST00000397090	SHANK2	Q9UPX8	1470 aa		32.92	■■■□□ 2.86
FGFR1-205	ENST00000397090	DAPK1	P53355	1430 aa		32.91	■■■□□ 2.86
FGFR1-205	ENST00000397090	DNMT1	P26358	1616 aa	Known RBP	32.91	■■■□□ 2.86
FGFR1-205	ENST00000397090	RRBP1	Q9P2E9	1410 aa	Known RBP	32.89	■■■□□ 2.86
FGFR1-205	ENST00000397090	NCKAP5L	Q9HCH0	1330 aa		32.89	■■■□□ 2.86
FGFR1-205	ENST00000397090	NPAT	Q14207	1427 aa		32.87	■■■□□ 2.85
FGFR1-205	ENST00000397090	CROCC2	H7BZ55	1655 aa		32.83	■■■□□ 2.85
FGFR1-205	ENST00000397090	A2M	P01023	1474 aa		32.83	■■■□□ 2.85
FGFR1-205	ENST00000397090	HSPA1L	P34931	641 aa		32.83	■■■□□ 2.85
FGFR1-205	ENST00000397090	PKD2	Q13563	968 aa		32.82	■■■□□ 2.84
FGFR1-205	ENST00000397090	ADGB	Q8N7X0	1667 aa		32.8	■■■□□ 2.84
FGFR1-205	ENST00000397090	PLXNC1	O60486	1568 aa		32.79	■■■□□ 2.84
FGFR1-205	ENST00000397090	PLA2R1	Q13018	1463 aa		32.78	■■■□□ 2.84
FGFR1-205	ENST00000397090	SCAF1	Q9H7N4	1312 aa	Known RBP	32.77	■■■□□ 2.84
FGFR1-205	ENST00000397090	DHX29	Q7Z478	1369 aa	Known RBP	32.77	■■■□□ 2.84
FGFR1-205	ENST00000397090	MROH2A	A6NES4	1674 aa		32.74	■■■□□ 2.83
FGFR1-205	ENST00000397090	ANKRD30A	Q9BXX3	1397 aa		32.73	■■■□□ 2.83
FGFR1-205	ENST00000397090	PHF23	Q9BUL5	403 aa	Predicted RBP	32.73	■■■□□ 2.83
FGFR1-205	ENST00000397090	ADGRL2	O95490	1459 aa		32.73	■■■□□ 2.83
FGFR1-205	ENST00000397090	ZMYM3	Q14202	1370 aa		32.72	■■■□□ 2.83
FGFR1-205	ENST00000397090	PIP4K2B	P78356	416 aa		32.72	■■■□□ 2.83
FGFR1-205	ENST00000397090	KIF15	Q9NS87	1388 aa		32.7	■■■□□ 2.82
FGFR1-205	ENST00000397090	TOM1	O60784	492 aa		32.69	■■■□□ 2.82
FGFR1-205	ENST00000397090	CHIC2	Q9UKJ5	165 aa		32.69	■■■□□ 2.82
FGFR1-205	ENST00000397090	PPP6R1	Q9UPN7	881 aa		32.69	■■■□□ 2.82
FGFR1-205	ENST00000397090	ZNF142	P52746	1687 aa	Predicted RBP	32.68	■■■□□ 2.82
FGFR1-205	ENST00000397090	PTPRK	Q15262	1439 aa		32.68	■■■□□ 2.82
FGFR1-205	ENST00000397090	DUOX2	Q9NRD8	1548 aa		32.67	■■■□□ 2.82
FGFR1-205	ENST00000397090	ROCK1	Q13464	1354 aa		32.64	■■■□□ 2.82
FGFR1-205	ENST00000397090	MYO3A	Q8NEV4	1616 aa		32.64	■■■□□ 2.82
FGFR1-205	ENST00000397090	RRP7BP	Q9NSQ0	103 aa		32.64	■■■□□ 2.82
FGFR1-205	ENST00000397090	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.63	■■■□□ 2.81
FGFR1-205	ENST00000397090	ITGAE	P38570	1179 aa		32.61	■■■□□ 2.81
FGFR1-205	ENST00000397090	ERBIN	Q96RT1	1412 aa		32.6	■■■□□ 2.81
FGFR1-205	ENST00000397090	KIF3B	O15066	747 aa		32.58	■■■□□ 2.81
FGFR1-205	ENST00000397090	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.58	■■■□□ 2.81
FGFR1-205	ENST00000397090	CPS1	P31327	1500 aa		32.56	■■■□□ 2.8
FGFR1-205	ENST00000397090	GGT6	Q6P531	493 aa		32.53	■■■□□ 2.8
FGFR1-205	ENST00000397090	CLTC	Q00610	1675 aa	Known RBP	32.51	■■■□□ 2.79
FGFR1-205	ENST00000397090	ANKRD50	Q9ULJ7	1429 aa		32.49	■■■□□ 2.79
FGFR1-205	ENST00000397090	RNF17	Q9BXT8	1623 aa	Known RBP	32.48	■■■□□ 2.79
FGFR1-205	ENST00000397090	FAM135A	Q9P2D6	1515 aa		32.48	■■■□□ 2.79
FGFR1-205	ENST00000397090	A2ML1	A8K2U0	1454 aa		32.44	■■■□□ 2.78
FGFR1-205	ENST00000397090	KDM5D	Q9BY66	1539 aa		32.39	■■■□□ 2.78
FGFR1-205	ENST00000397090	MROH1	Q8NDA8	1641 aa		32.39	■■■□□ 2.78
FGFR1-205	ENST00000397090	PRDM15	P57071	1507 aa	Predicted RBP	32.38	■■■□□ 2.77
FGFR1-205	ENST00000397090	DEPDC5	O75140	1603 aa		32.37	■■■□□ 2.77
FGFR1-205	ENST00000397090	HFM1	A2PYH4	1435 aa		32.37	■■■□□ 2.77
FGFR1-205	ENST00000397090	WASHC2C	Q9Y4E1	1318 aa		32.37	■■■□□ 2.77
FGFR1-205	ENST00000397090	POLR1A	O95602	1720 aa	Predicted RBP	32.37	■■■□□ 2.77
FGFR1-205	ENST00000397090	ALK	Q9UM73	1620 aa		32.37	■■■□□ 2.77
FGFR1-205	ENST00000397090	NEURL4	Q96JN8	1562 aa		32.36	■■■□□ 2.77
FGFR1-205	ENST00000397090	NAIP	Q13075	1403 aa		32.36	■■■□□ 2.77
FGFR1-205	ENST00000397090	KANK1	Q14678	1352 aa		32.33	■■■□□ 2.77
FGFR1-205	ENST00000397090	ABCC3	O15438	1527 aa		32.31	■■■□□ 2.76
FGFR1-205	ENST00000397090	ZC3H13	Q5T200	1668 aa	Known RBP	32.31	■■■□□ 2.76
FGFR1-205	ENST00000397090	GCC2	Q8IWJ2	1684 aa		32.3	■■■□□ 2.76
FGFR1-205	ENST00000397090	VWDE	Q8N2E2	1590 aa		32.29	■■■□□ 2.76
FGFR1-205	ENST00000397090	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.29	■■■□□ 2.76
FGFR1-205	ENST00000397090	RGS17	Q9UGC6	210 aa	Predicted RBP	32.29	■■■□□ 2.76
FGFR1-205	ENST00000397090	SENP3	Q9H4L4	574 aa	Predicted RBP	32.27	■■■□□ 2.76
FGFR1-205	ENST00000397090	UNC13B	O14795	1591 aa		32.26	■■■□□ 2.75
FGFR1-205	ENST00000397090	ANKLE2	Q86XL3	938 aa		32.25	■■■□□ 2.75
FGFR1-205	ENST00000397090	LMTK2	Q8IWU2	1503 aa		32.24	■■■□□ 2.75
FGFR1-205	ENST00000397090	PZP	P20742	1482 aa		32.22	■■■□□ 2.75
FGFR1-205	ENST00000397090	TNR	Q92752	1358 aa		32.21	■■■□□ 2.75
FGFR1-205	ENST00000397090	ARHGAP31	Q2M1Z3	1444 aa		32.18	■■■□□ 2.74
FGFR1-205	ENST00000397090	CEP152	O94986	1710 aa		32.17	■■■□□ 2.74
FGFR1-205	ENST00000397090	NPHP4	O75161	1426 aa	Predicted RBP	32.17	■■■□□ 2.74
FGFR1-205	ENST00000397090	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.16	■■■□□ 2.74
FGFR1-205	ENST00000397090	NUP155	O75694	1391 aa		32.16	■■■□□ 2.74
FGFR1-205	ENST00000397090	MED14	O60244	1454 aa		32.16	■■■□□ 2.74
FGFR1-205	ENST00000397090	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.14	■■■□□ 2.74
FGFR1-205	ENST00000397090	SETD5	Q9C0A6	1442 aa		32.13	■■■□□ 2.73
FGFR1-205	ENST00000397090	ACIN1	Q9UKV3	1341 aa	Known RBP	32.13	■■■□□ 2.73
FGFR1-205	ENST00000397090	IQGAP3	Q86VI3	1631 aa		32.12	■■■□□ 2.73
FGFR1-205	ENST00000397090	LRRC7	Q96NW7	1537 aa		32.12	■■■□□ 2.73
FGFR1-205	ENST00000397090	EFCAB6	Q5THR3	1501 aa		32.1	■■■□□ 2.73
FGFR1-205	ENST00000397090	TET3	O43151	1660 aa		32.08	■■■□□ 2.73
FGFR1-205	ENST00000397090	SYNM	O15061	1565 aa		32.07	■■■□□ 2.72
FGFR1-205	ENST00000397090	RPRD2	Q5VT52	1461 aa	Known RBP	32.06	■■■□□ 2.72
FGFR1-205	ENST00000397090	ERVK-7	P63135	1459 aa		32.05	■■■□□ 2.72
FGFR1-205	ENST00000397090	NLRP1	Q9C000	1473 aa		32.05	■■■□□ 2.72
FGFR1-205	ENST00000397090	POTEA	Q6S8J7	498 aa		32.05	■■■□□ 2.72
FGFR1-205	ENST00000397090	UGGT1	Q9NYU2	1555 aa		32.05	■■■□□ 2.72
FGFR1-205	ENST00000397090	IQGAP1	P46940	1657 aa		32.05	■■■□□ 2.72
FGFR1-205	ENST00000397090	STRCP1	A6NGW2	1772 aa		32.04	■■■□□ 2.72
FGFR1-205	ENST00000397090	TRIM26	Q12899	539 aa	Predicted RBP	32.03	■■■□□ 2.72
FGFR1-205	ENST00000397090	TRIM52	Q96A61	297 aa		32.02	■■■□□ 2.72
FGFR1-205	ENST00000397090	RAB3GAP2	Q9H2M9	1393 aa		32.01	■■■□□ 2.71
FGFR1-205	ENST00000397090	HRC	P23327	699 aa		31.98	■■■□□ 2.71
FGFR1-205	ENST00000397090	NOS1	P29475	1434 aa		31.96	■■■□□ 2.71
FGFR1-205	ENST00000397090		E9PCH4	1651 aa		31.92	■■■□□ 2.7
FGFR1-205	ENST00000397090	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.91	■■■□□ 2.7
FGFR1-205	ENST00000397090	FAM135B	Q49AJ0	1406 aa		31.87	■■■□□ 2.69
FGFR1-205	ENST00000397090	SLC52A1	Q9NWF4	448 aa		31.85	■■■□□ 2.69
FGFR1-205	ENST00000397090	MPHOSPH9	Q99550	1183 aa		31.84	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms