RNA–Protein interactions for RNA: ENST00000394121.8

THRA-202, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 2 BASIC

Gene THRA, Length 2,260 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-202ENST00000394121 CCDC7Q96M83 1385 aa32.15■■■□□ 2.74
THRA-202ENST00000394121 TSPOAP1O95153 1857 aa32.1■■■□□ 2.73
THRA-202ENST00000394121 C11orf95C9JLR9 678 aaPredicted RBP32.1■■■□□ 2.73
THRA-202ENST00000394121 NBPF8Q3BBV2 869 aa32.09■■■□□ 2.73
THRA-202ENST00000394121 ANP32EQ9BTT0 268 aa32.09■■■□□ 2.73
THRA-202ENST00000394121 NEO1Q92859 1461 aa32.09■■■□□ 2.73
THRA-202ENST00000394121 ZFYVE16Q7Z3T8 1539 aa32.09■■■□□ 2.73
THRA-202ENST00000394121 SLC4A1APQ9BWU0 796 aaKnown RBP32.08■■■□□ 2.73
THRA-202ENST00000394121 POLR1AO95602 1720 aaPredicted RBP32.07■■■□□ 2.73
THRA-202ENST00000394121 POGZQ7Z3K3 1410 aa32.06■■■□□ 2.72
THRA-202ENST00000394121 CFAP74Q9C0B2 1584 aa32.06■■■□□ 2.72
THRA-202ENST00000394121 PRKRIP1Q9H875 184 aaPredicted RBP32.05■■■□□ 2.72
THRA-202ENST00000394121 SPATA31E1Q6ZUB1 1445 aa32.05■■■□□ 2.72
THRA-202ENST00000394121 ZNF518AQ6AHZ1 1483 aa32.05■■■□□ 2.72
THRA-202ENST00000394121 PLXNC1O60486 1568 aa32.04■■■□□ 2.72
THRA-202ENST00000394121 RBM19Q9Y4C8 960 aaKnown RBP32.04■■■□□ 2.72
THRA-202ENST00000394121 KIF13AQ9H1H9 1805 aa32.04■■■□□ 2.72
THRA-202ENST00000394121 ATP7AQ04656 1500 aa32.03■■■□□ 2.72
THRA-202ENST00000394121 RTEL1-TNFRSF6BF6WH68 1400 aa32.03■■■□□ 2.72
THRA-202ENST00000394121 PPRC1Q5VV67 1664 aaKnown RBP32.02■■■□□ 2.72
THRA-202ENST00000394121 PZPP20742 1482 aa32■■■□□ 2.71
THRA-202ENST00000394121 NUP155O75694 1391 aa32■■■□□ 2.71
THRA-202ENST00000394121 CCDC184Q52MB2 194 aa32■■■□□ 2.71
THRA-202ENST00000394121 INO80Q9ULG1 1556 aaPredicted RBP32■■■□□ 2.71
THRA-202ENST00000394121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32■■■□□ 2.71
THRA-202ENST00000394121 DUOX2Q9NRD8 1548 aa31.97■■■□□ 2.71
THRA-202ENST00000394121 KIF7Q2M1P5 1343 aa31.95■■■□□ 2.71
THRA-202ENST00000394121 ERICH6BQ5W0A0 696 aa31.95■■■□□ 2.71
THRA-202ENST00000394121 KDM5CP41229 1560 aa31.94■■■□□ 2.7
THRA-202ENST00000394121 KIDINS220Q9ULH0 1771 aa31.94■■■□□ 2.7
THRA-202ENST00000394121 MRS2Q9HD23 443 aa31.91■■■□□ 2.7
THRA-202ENST00000394121 TRHP20396 242 aaPredicted RBP31.91■■■□□ 2.7
THRA-202ENST00000394121 ERBINQ96RT1 1412 aa31.9■■■□□ 2.7
THRA-202ENST00000394121 PKD2Q13563 968 aa31.9■■■□□ 2.7
THRA-202ENST00000394121 MLH3Q9UHC1 1453 aa31.88■■■□□ 2.69
THRA-202ENST00000394121 COL17A1Q9UMD9 1497 aaPredicted RBP31.87■■■□□ 2.69
THRA-202ENST00000394121 ZBED9Q6R2W3 1325 aa31.87■■■□□ 2.69
THRA-202ENST00000394121 FAM9BQ8IZU0 186 aa31.87■■■□□ 2.69
THRA-202ENST00000394121 IRX6P78412 446 aaPredicted RBP31.86■■■□□ 2.69
THRA-202ENST00000394121 RICTORQ6R327 1708 aa31.86■■■□□ 2.69
THRA-202ENST00000394121 FRMPD1Q5SYB0 1578 aa31.86■■■□□ 2.69
THRA-202ENST00000394121 KIF3BO15066 747 aa31.86■■■□□ 2.69
THRA-202ENST00000394121 DHX29Q7Z478 1369 aaKnown RBP31.85■■■□□ 2.69
THRA-202ENST00000394121 HECW2Q9P2P5 1572 aa31.85■■■□□ 2.69
THRA-202ENST00000394121 YEATS2Q9ULM3 1422 aa31.84■■■□□ 2.69
THRA-202ENST00000394121 FAM135AQ9P2D6 1515 aa31.8■■■□□ 2.68
THRA-202ENST00000394121 KDM5DQ9BY66 1539 aa31.8■■■□□ 2.68
THRA-202ENST00000394121 ABCA6Q8N139 1617 aa31.79■■■□□ 2.68
THRA-202ENST00000394121 A2MP01023 1474 aa31.79■■■□□ 2.68
THRA-202ENST00000394121 UNC13BO14795 1591 aa31.79■■■□□ 2.68
THRA-202ENST00000394121 PPP4R2Q9NY27 417 aa31.78■■■□□ 2.68
THRA-202ENST00000394121 USP47Q96K76 1375 aa31.75■■■□□ 2.67
THRA-202ENST00000394121 BCORL1Q5H9F3 1711 aa31.74■■■□□ 2.67
THRA-202ENST00000394121 MAGI2Q86UL8 1455 aa31.73■■■□□ 2.67
THRA-202ENST00000394121 ARID4BQ4LE39 1312 aaPredicted RBP31.72■■■□□ 2.67
THRA-202ENST00000394121 DIP2CQ9Y2E4 1556 aa31.72■■■□□ 2.67
THRA-202ENST00000394121 GGT6Q6P531 493 aa31.69■■■□□ 2.66
THRA-202ENST00000394121 UHRF1BP1Q6BDS2 1440 aa31.69■■■□□ 2.66
THRA-202ENST00000394121 IQGAP3Q86VI3 1631 aa31.66■■■□□ 2.66
THRA-202ENST00000394121 ZMYM4Q5VZL5 1548 aa31.66■■■□□ 2.66
THRA-202ENST00000394121 ZNF326Q5BKZ1 582 aaKnown RBP31.64■■■□□ 2.66
THRA-202ENST00000394121 FANCIQ9NVI1 1328 aa31.64■■■□□ 2.66
THRA-202ENST00000394121 MROH1Q8NDA8 1641 aa31.64■■■□□ 2.66
THRA-202ENST00000394121 RALGAPBQ86X10 1494 aa31.63■■■□□ 2.65
THRA-202ENST00000394121 DEPDC5O75140 1603 aa31.63■■■□□ 2.65
THRA-202ENST00000394121 EIF2AK4Q9P2K8 1649 aaKnown RBP31.61■■■□□ 2.65
THRA-202ENST00000394121 ROCK2O75116 1388 aaKnown RBP31.59■■■□□ 2.65
THRA-202ENST00000394121 SMG6Q86US8 1419 aaKnown RBP31.58■■■□□ 2.65
THRA-202ENST00000394121 PLA2R1Q13018 1463 aa31.57■■■□□ 2.64
THRA-202ENST00000394121 PRDM15P57071 1507 aaPredicted RBP31.57■■■□□ 2.64
THRA-202ENST00000394121 KANK1Q14678 1352 aa31.57■■■□□ 2.64
THRA-202ENST00000394121 POLR3GLQ9BT43 218 aa31.55■■■□□ 2.64
THRA-202ENST00000394121 MSH5O43196 834 aa31.55■■■□□ 2.64
THRA-202ENST00000394121 VWDEQ8N2E2 1590 aa31.55■■■□□ 2.64
THRA-202ENST00000394121 ATP10AO60312 1499 aa31.54■■■□□ 2.64
THRA-202ENST00000394121 CARD11Q9BXL7 1154 aa31.51■■■□□ 2.63
THRA-202ENST00000394121 RNF17Q9BXT8 1623 aaKnown RBP31.5■■■□□ 2.63
THRA-202ENST00000394121 B4GALNT3Q6L9W6 998 aa31.5■■■□□ 2.63
THRA-202ENST00000394121 WASHC2CQ9Y4E1 1318 aa31.48■■■□□ 2.63
THRA-202ENST00000394121 E9PCH4 1651 aa31.48■■■□□ 2.63
THRA-202ENST00000394121 SIGLEC1Q9BZZ2 1709 aa31.47■■■□□ 2.63
THRA-202ENST00000394121 NUDCQ9Y266 331 aa31.47■■■□□ 2.63
THRA-202ENST00000394121 MLECQ14165 292 aa31.45■■■□□ 2.63
THRA-202ENST00000394121 CNGB1Q14028 1251 aaPredicted RBP31.44■■■□□ 2.62
THRA-202ENST00000394121 CEP152O94986 1710 aa31.43■■■□□ 2.62
THRA-202ENST00000394121 CCDC144AA2RUR9 1427 aa31.43■■■□□ 2.62
THRA-202ENST00000394121 PNISRQ8TF01 805 aaKnown RBP31.43■■■□□ 2.62
THRA-202ENST00000394121 TET3O43151 1660 aa31.42■■■□□ 2.62
THRA-202ENST00000394121 RNF123Q5XPI4 1314 aa31.42■■■□□ 2.62
THRA-202ENST00000394121 ARHGEF40Q8TER5 1519 aa31.42■■■□□ 2.62
THRA-202ENST00000394121 RGL3Q3MIN7 710 aa31.39■■■□□ 2.62
THRA-202ENST00000394121 TMC1Q8TDI8 760 aa31.39■■■□□ 2.62
THRA-202ENST00000394121 ABCC3O15438 1527 aa31.39■■■□□ 2.62
THRA-202ENST00000394121 KTN1Q86UP2 1357 aaKnown RBP31.39■■■□□ 2.62
THRA-202ENST00000394121 ST20-MTHFSA0A0A6YYL1 179 aa31.38■■■□□ 2.61
THRA-202ENST00000394121 KDM2AQ9Y2K7 1162 aa31.38■■■□□ 2.61
THRA-202ENST00000394121 EFCAB6Q5THR3 1501 aa31.38■■■□□ 2.61
THRA-202ENST00000394121 DCAF11Q8TEB1 546 aa31.37■■■□□ 2.61
THRA-202ENST00000394121 LMTK2Q8IWU2 1503 aa31.37■■■□□ 2.61
THRA-202ENST00000394121 NPATQ14207 1427 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms