RNA–Protein interactions for RNA: ENST00000394121.8

THRA-202, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 2 BASIC

Gene THRA, Length 2,260 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-202ENST00000394121 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.17■■□□□ 1.464e-10■■■■■ 87
THRA-202ENST00000394121 PTBP1P26599 531 aaKnown RBP eCLIP21.75■■□□□ 1.076e-10■■■■■ 32.4
THRA-202ENST00000394121 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.41■■□□□ 1.669e-10■■■■■ 79.8
THRA-202ENST00000394121 AGGF1Q8N302 714 aaeCLIP24.41■■□□□ 1.58e-9■■■■■ 68.6
THRA-202ENST00000394121 PABPC4Q13310 644 aaKnown RBP eCLIP25.38■■□□□ 1.652e-8■■□□□ 14.5
THRA-202ENST00000394121 GRSF1Q12849 480 aaKnown RBP eCLIP22.91■■□□□ 1.265e-8■■■■■ 27.4
THRA-202ENST00000394121 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.5■■□□□ 1.036e-8■■■□□ 16.6
THRA-202ENST00000394121 UPF1Q92900 1129 aaKnown RBP eCLIP26.52■■□□□ 1.841e-7■■■■■ 35.6
THRA-202ENST00000394121 DDX6P26196 483 aaKnown RBP eCLIP22.3■■□□□ 1.162e-7■■■■□ 20.6
THRA-202ENST00000394121 HNRNPLP14866 589 aaKnown RBP eCLIP23.4■■□□□ 1.342e-7■■■■■ 40.9
THRA-202ENST00000394121 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.48■■□□□ 1.673e-7■■■□□ 16.2
THRA-202ENST00000394121 RBFOX2O43251 390 aaKnown RBP eCLIP19.22■□□□□ 0.674e-7■■■□□ 18.8
THRA-202ENST00000394121 ZC3H11AO75152 810 aaKnown RBP eCLIP24.74■■□□□ 1.555e-7■■■■■ 28.6
THRA-202ENST00000394121 DDX3XO00571 662 aaKnown RBP eCLIP25.29■■□□□ 1.645e-7■■■■■ 33.6
THRA-202ENST00000394121 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.79■■□□□ 1.561e-6■■■■□ 22.3
THRA-202ENST00000394121 GTF2F1P35269 517 aaKnown RBP eCLIP27.43■■□□□ 1.981e-6■■■■□ 23.1
THRA-202ENST00000394121 ILF3Q12906 894 aaKnown RBP eCLIP21.26■□□□□ 0.991e-6■■□□□ 12.6
THRA-202ENST00000394121 PCBP2Q15366 365 aaKnown RBP eCLIP22.87■■□□□ 1.251e-6■■■■□ 23.8
THRA-202ENST00000394121 AKAP1Q92667 903 aaKnown RBP eCLIP21.57■■□□□ 1.041e-6■■■■■ 33.9
THRA-202ENST00000394121 QKIQ96PU8 341 aaKnown RBP eCLIP23.95■■□□□ 1.432e-6■□□□□ 10.6
THRA-202ENST00000394121 AQRO60306 1485 aaKnown RBP eCLIP35.28■■■■□ 3.242e-6■■■■□ 25.7
THRA-202ENST00000394121 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.62■□□□□ 0.412e-6■■□□□ 13.9
THRA-202ENST00000394121 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.34■■□□□ 1.173e-6■■■■■ 30.4
THRA-202ENST00000394121 SF3B1O75533 1304 aaKnown RBP eCLIP23.78■■□□□ 1.43e-6■■■■■ 112.6
THRA-202ENST00000394121 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.36■■□□□ 1.173e-6■■■■□ 20.1
THRA-202ENST00000394121 PCBP1Q15365 356 aaKnown RBP eCLIP23.65■■□□□ 1.383e-6■■■■■ 30.3
THRA-202ENST00000394121 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.75■■■□□ 2.033e-6■□□□□ 8.4
THRA-202ENST00000394121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.87■■□□□ 1.574e-6■■■■■ 70.5
THRA-202ENST00000394121 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.33■■□□□ 1.647e-6■■■■□ 21.2
THRA-202ENST00000394121 METAP2P50579 478 aaKnown RBP eCLIP26.86■■□□□ 1.898e-6■■□□□ 13.7
THRA-202ENST00000394121 SF3B4Q15427 424 aaKnown RBP eCLIP22.04■■□□□ 1.129e-6■■□□□ 14.4
Retrieved 31 of 31 RNA–protein pairs in 6.5 ms