RNA–Protein interactions for RNA: ENST00000393559.1

LAMB1-202, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-202ENST00000393559 INO80Q9ULG1 1556 aaPredicted RBP20.79■□□□□ 0.92
LAMB1-202ENST00000393559 MROH2AA6NES4 1674 aa20.79■□□□□ 0.92
LAMB1-202ENST00000393559 PLXNC1O60486 1568 aa20.78■□□□□ 0.92
LAMB1-202ENST00000393559 KIF3BO15066 747 aa20.76■□□□□ 0.91
LAMB1-202ENST00000393559 MBD5Q9P267 1494 aa20.75■□□□□ 0.91
LAMB1-202ENST00000393559 DHX29Q7Z478 1369 aaKnown RBP20.74■□□□□ 0.91
LAMB1-202ENST00000393559 FBXO31Q5XUX0 539 aaPredicted RBP20.74■□□□□ 0.91
LAMB1-202ENST00000393559 CAMSAP2Q08AD1 1489 aa20.74■□□□□ 0.91
LAMB1-202ENST00000393559 IQSEC2Q5JU85 1478 aa20.74■□□□□ 0.91
LAMB1-202ENST00000393559 SOCS7O14512 581 aa20.73■□□□□ 0.91
LAMB1-202ENST00000393559 ITGAEP38570 1179 aa20.73■□□□□ 0.91
LAMB1-202ENST00000393559 CEP170BQ9Y4F5 1589 aaPredicted RBP20.72■□□□□ 0.91
LAMB1-202ENST00000393559 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
LAMB1-202ENST00000393559 RTEL1-TNFRSF6BF6WH68 1400 aa20.71■□□□□ 0.91
LAMB1-202ENST00000393559 PLA2R1Q13018 1463 aa20.71■□□□□ 0.91
LAMB1-202ENST00000393559 WASHC2CQ9Y4E1 1318 aa20.71■□□□□ 0.91
LAMB1-202ENST00000393559 ADGBQ8N7X0 1667 aa20.68■□□□□ 0.9
LAMB1-202ENST00000393559 RSPH4AQ5TD94 716 aa20.68■□□□□ 0.9
LAMB1-202ENST00000393559 TSPY4P0CV99 314 aa20.67■□□□□ 0.9
LAMB1-202ENST00000393559 TSPY10P0CW01 314 aa20.67■□□□□ 0.9
LAMB1-202ENST00000393559 SCAF1Q9H7N4 1312 aaKnown RBP20.67■□□□□ 0.9
LAMB1-202ENST00000393559 TNRQ92752 1358 aa20.67■□□□□ 0.9
LAMB1-202ENST00000393559 A2ML1A8K2U0 1454 aa20.67■□□□□ 0.9
LAMB1-202ENST00000393559 SPATA31D1Q6ZQQ2 1576 aa20.66■□□□□ 0.9
LAMB1-202ENST00000393559 CCDC141Q6ZP82 1450 aa20.65■□□□□ 0.9
LAMB1-202ENST00000393559 ZNF142P52746 1687 aaPredicted RBP20.64■□□□□ 0.9
LAMB1-202ENST00000393559 DNMT1P26358 1616 aaKnown RBP20.64■□□□□ 0.9
LAMB1-202ENST00000393559 DAPK1P53355 1430 aa20.63■□□□□ 0.89
LAMB1-202ENST00000393559 PIP4K2BP78356 416 aa20.63■□□□□ 0.89
LAMB1-202ENST00000393559 ABCC5O15440 1437 aa20.62■□□□□ 0.89
LAMB1-202ENST00000393559 ANKLE2Q86XL3 938 aa20.62■□□□□ 0.89
LAMB1-202ENST00000393559 THEMISQ8N1K5 641 aaPredicted RBP20.61■□□□□ 0.89
LAMB1-202ENST00000393559 ARHGEF5Q12774 1597 aa20.59■□□□□ 0.89
LAMB1-202ENST00000393559 KDM5DQ9BY66 1539 aa20.58■□□□□ 0.89
LAMB1-202ENST00000393559 PZPP20742 1482 aa20.58■□□□□ 0.89
LAMB1-202ENST00000393559 TOM1O60784 492 aa20.57■□□□□ 0.88
LAMB1-202ENST00000393559 HSPA1LP34931 641 aa20.56■□□□□ 0.88
LAMB1-202ENST00000393559 CHIC2Q9UKJ5 165 aa20.56■□□□□ 0.88
LAMB1-202ENST00000393559 CROCC2H7BZ55 1655 aa20.55■□□□□ 0.88
LAMB1-202ENST00000393559 SHANK2Q9UPX8 1470 aa20.54■□□□□ 0.88
LAMB1-202ENST00000393559 FAM135AQ9P2D6 1515 aa20.51■□□□□ 0.87
LAMB1-202ENST00000393559 NLRP1Q9C000 1473 aa20.5■□□□□ 0.87
LAMB1-202ENST00000393559 ROCK1Q13464 1354 aa20.5■□□□□ 0.87
LAMB1-202ENST00000393559 HFM1A2PYH4 1435 aa20.5■□□□□ 0.87
LAMB1-202ENST00000393559 NPHP4O75161 1426 aaPredicted RBP20.5■□□□□ 0.87
LAMB1-202ENST00000393559 SETD5Q9C0A6 1442 aa20.5■□□□□ 0.87
LAMB1-202ENST00000393559 NEURL4Q96JN8 1562 aa20.5■□□□□ 0.87
LAMB1-202ENST00000393559 UGGT1Q9NYU2 1555 aa20.5■□□□□ 0.87
LAMB1-202ENST00000393559 CPS1P31327 1500 aa20.49■□□□□ 0.87
LAMB1-202ENST00000393559 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
LAMB1-202ENST00000393559 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
LAMB1-202ENST00000393559 ADGRL2O95490 1459 aa20.49■□□□□ 0.87
LAMB1-202ENST00000393559 NAIPQ13075 1403 aa20.47■□□□□ 0.87
LAMB1-202ENST00000393559 MAST1Q9Y2H9 1570 aa20.46■□□□□ 0.87
LAMB1-202ENST00000393559 ANKRD30AQ9BXX3 1397 aa20.46■□□□□ 0.87
LAMB1-202ENST00000393559 RAB3GAP2Q9H2M9 1393 aa20.46■□□□□ 0.87
LAMB1-202ENST00000393559 POLR1AO95602 1720 aaPredicted RBP20.44■□□□□ 0.86
LAMB1-202ENST00000393559 GCC2Q8IWJ2 1684 aa20.44■□□□□ 0.86
LAMB1-202ENST00000393559 ABCC3O15438 1527 aa20.43■□□□□ 0.86
LAMB1-202ENST00000393559 MED14O60244 1454 aa20.42■□□□□ 0.86
LAMB1-202ENST00000393559 VWDEQ8N2E2 1590 aa20.42■□□□□ 0.86
LAMB1-202ENST00000393559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.861e-7■□□□□ 10.9
LAMB1-202ENST00000393559 ERVK-7P63135 1459 aa20.4■□□□□ 0.86
LAMB1-202ENST00000393559 KIF15Q9NS87 1388 aa20.38■□□□□ 0.85
LAMB1-202ENST00000393559 TXNDC2Q86VQ3 553 aa20.38■□□□□ 0.85
LAMB1-202ENST00000393559 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
LAMB1-202ENST00000393559 DEPDC5O75140 1603 aa20.38■□□□□ 0.85
LAMB1-202ENST00000393559 RNF17Q9BXT8 1623 aaKnown RBP20.38■□□□□ 0.85
LAMB1-202ENST00000393559 HRCP23327 699 aa20.37■□□□□ 0.85
LAMB1-202ENST00000393559 LTKP29376 864 aa20.36■□□□□ 0.85
LAMB1-202ENST00000393559 STAG3Q9UJ98 1225 aa20.34■□□□□ 0.85
LAMB1-202ENST00000393559 EID1Q9Y6B2 187 aa20.34■□□□□ 0.85
LAMB1-202ENST00000393559 IQGAP1P46940 1657 aa20.34■□□□□ 0.85
LAMB1-202ENST00000393559 MED1Q15648 1581 aaPredicted RBP20.34■□□□□ 0.85
LAMB1-202ENST00000393559 LRRC7Q96NW7 1537 aa20.33■□□□□ 0.85
LAMB1-202ENST00000393559 DUOX2Q9NRD8 1548 aa20.33■□□□□ 0.85
LAMB1-202ENST00000393559 ANKRD50Q9ULJ7 1429 aa20.33■□□□□ 0.84
LAMB1-202ENST00000393559 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
LAMB1-202ENST00000393559 MROH1Q8NDA8 1641 aa20.32■□□□□ 0.84
LAMB1-202ENST00000393559 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
LAMB1-202ENST00000393559 SCAF11Q99590 1463 aaKnown RBP20.31■□□□□ 0.84
LAMB1-202ENST00000393559 CCER1Q8TC90 406 aaPredicted RBP20.3■□□□□ 0.84
LAMB1-202ENST00000393559 ALKQ9UM73 1620 aa20.29■□□□□ 0.84
LAMB1-202ENST00000393559 KANK1Q14678 1352 aa20.29■□□□□ 0.84
LAMB1-202ENST00000393559 DHX57Q6P158 1386 aaKnown RBP20.28■□□□□ 0.84
LAMB1-202ENST00000393559 CEP152O94986 1710 aa20.27■□□□□ 0.84
LAMB1-202ENST00000393559 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.83
LAMB1-202ENST00000393559 ERBINQ96RT1 1412 aa20.27■□□□□ 0.83
LAMB1-202ENST00000393559 CFAP65Q6ZU64 1925 aaKnown RBP20.26■□□□□ 0.83
LAMB1-202ENST00000393559 IDI1Q13907 227 aa20.25■□□□□ 0.83
LAMB1-202ENST00000393559 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
LAMB1-202ENST00000393559 STRCP1A6NGW2 1772 aa20.25■□□□□ 0.83
LAMB1-202ENST00000393559 UBR1Q8IWV7 1749 aa20.24■□□□□ 0.83
LAMB1-202ENST00000393559 ACIN1Q9UKV3 1341 aaKnown RBP20.24■□□□□ 0.83
LAMB1-202ENST00000393559 ARHGAP23Q9P227 1491 aa20.24■□□□□ 0.83
LAMB1-202ENST00000393559 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
LAMB1-202ENST00000393559 SLIT1O75093 1534 aa20.22■□□□□ 0.83
LAMB1-202ENST00000393559 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
LAMB1-202ENST00000393559 BCANQ96GW7 911 aa20.22■□□□□ 0.83
LAMB1-202ENST00000393559 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms