RNA–Protein interactions for RNA: ENST00000393559.1

LAMB1-202, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-202ENST00000393559 NISCHQ9Y2I1 1504 aa32.5■■■□□ 2.79
LAMB1-202ENST00000393559 ABCC9O60706 1549 aa29.51■■■□□ 2.32
LAMB1-202ENST00000393559 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
LAMB1-202ENST00000393559 DNAJC5BQ9UF47 199 aa27.91■■■□□ 2.06
LAMB1-202ENST00000393559 RB1CC1Q8TDY2 1594 aa27.89■■■□□ 2.05
LAMB1-202ENST00000393559 DCAF8L2P0C7V8 631 aa27.81■■■□□ 2.04
LAMB1-202ENST00000393559 NACADO15069 1562 aa27.65■■■□□ 2.02
LAMB1-202ENST00000393559 PABPN1Q86U42 306 aaKnown RBP eCLIP27.56■■■□□ 2
LAMB1-202ENST00000393559 MYO15BQ96JP2 1530 aa27.15■■□□□ 1.94
LAMB1-202ENST00000393559 UNC13AQ9UPW8 1703 aa27.12■■□□□ 1.93
LAMB1-202ENST00000393559 BICRAQ9NZM4 1560 aa27.06■■□□□ 1.92
LAMB1-202ENST00000393559 ZCCHC6Q5VYS8 1495 aaKnown RBP26.86■■□□□ 1.89
LAMB1-202ENST00000393559 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
LAMB1-202ENST00000393559 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
LAMB1-202ENST00000393559 SHROOM4Q9ULL8 1493 aa26.62■■□□□ 1.85
LAMB1-202ENST00000393559 CECR2Q9BXF3 1484 aa26.59■■□□□ 1.85
LAMB1-202ENST00000393559 CC2D2AQ9P2K1 1620 aa26.55■■□□□ 1.84
LAMB1-202ENST00000393559 EIF4G1Q04637 1599 aaKnown RBP26.45■■□□□ 1.82
LAMB1-202ENST00000393559 DNAJC5Q9H3Z4 198 aa25.74■■□□□ 1.71
LAMB1-202ENST00000393559 NCAPD3P42695 1498 aa25.57■■□□□ 1.68
LAMB1-202ENST00000393559 ERCC6Q03468 1493 aa25.51■■□□□ 1.67
LAMB1-202ENST00000393559 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
LAMB1-202ENST00000393559 CUX2O14529 1486 aa25.41■■□□□ 1.66
LAMB1-202ENST00000393559 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
LAMB1-202ENST00000393559 SMARCA4P51532 1647 aa25.34■■□□□ 1.65
LAMB1-202ENST00000393559 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
LAMB1-202ENST00000393559 NESP48681 1621 aa25.28■■□□□ 1.64
LAMB1-202ENST00000393559 BAZ1BQ9UIG0 1483 aaKnown RBP25.24■■□□□ 1.63
LAMB1-202ENST00000393559 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
LAMB1-202ENST00000393559 MROH2BQ7Z745 1585 aa25.06■■□□□ 1.6
LAMB1-202ENST00000393559 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
LAMB1-202ENST00000393559 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
LAMB1-202ENST00000393559 PDS5BQ9NTI5 1447 aa24.95■■□□□ 1.58
LAMB1-202ENST00000393559 THOC2Q8NI27 1593 aaKnown RBP24.93■■□□□ 1.58
LAMB1-202ENST00000393559 CADPSQ9ULU8 1353 aa24.84■■□□□ 1.57
LAMB1-202ENST00000393559 KIF21AQ7Z4S6 1674 aa24.81■■□□□ 1.56
LAMB1-202ENST00000393559 WIZO95785 1651 aa24.72■■□□□ 1.55
LAMB1-202ENST00000393559 MRC2Q9UBG0 1479 aa24.7■■□□□ 1.54
LAMB1-202ENST00000393559 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
LAMB1-202ENST00000393559 WDR62O43379 1518 aa24.58■■□□□ 1.53
LAMB1-202ENST00000393559 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
LAMB1-202ENST00000393559 RSF1Q96T23 1441 aaPredicted RBP24.54■■□□□ 1.52
LAMB1-202ENST00000393559 FANCD2Q9BXW9 1451 aa24.54■■□□□ 1.52
LAMB1-202ENST00000393559 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
LAMB1-202ENST00000393559 CFTRP13569 1480 aa24.46■■□□□ 1.51
LAMB1-202ENST00000393559 OSCARQ8IYS5 282 aa24.38■■□□□ 1.49
LAMB1-202ENST00000393559 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
LAMB1-202ENST00000393559 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
LAMB1-202ENST00000393559 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
LAMB1-202ENST00000393559 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
LAMB1-202ENST00000393559 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
LAMB1-202ENST00000393559 TOPBP1Q92547 1522 aa24.03■■□□□ 1.44
LAMB1-202ENST00000393559 PRDM2Q13029 1718 aa23.99■■□□□ 1.43
LAMB1-202ENST00000393559 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
LAMB1-202ENST00000393559 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
LAMB1-202ENST00000393559 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
LAMB1-202ENST00000393559 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
LAMB1-202ENST00000393559 FBLN2P98095 1184 aa23.91■■□□□ 1.42
LAMB1-202ENST00000393559 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.421e-10■■■■■ 44
LAMB1-202ENST00000393559 DNMBPQ6XZF7 1577 aa23.88■■□□□ 1.41
LAMB1-202ENST00000393559 CYB5RLQ6IPT4 315 aa23.87■■□□□ 1.41
LAMB1-202ENST00000393559 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
LAMB1-202ENST00000393559 EIF4G3O43432 1585 aaKnown RBP23.86■■□□□ 1.41
LAMB1-202ENST00000393559 POLA1P09884 1462 aaPredicted RBP23.78■■□□□ 1.4
LAMB1-202ENST00000393559 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
LAMB1-202ENST00000393559 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
LAMB1-202ENST00000393559 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
LAMB1-202ENST00000393559 SOGA1O94964 1423 aa23.75■■□□□ 1.39
LAMB1-202ENST00000393559 TRHP20396 242 aaPredicted RBP23.71■■□□□ 1.39
LAMB1-202ENST00000393559 CHD1O14646 1710 aa23.67■■□□□ 1.38
LAMB1-202ENST00000393559 CHMP7Q8WUX9 453 aaPredicted RBP23.64■■□□□ 1.37
LAMB1-202ENST00000393559 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
LAMB1-202ENST00000393559 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
LAMB1-202ENST00000393559 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
LAMB1-202ENST00000393559 CUX1P39880 1505 aa23.54■■□□□ 1.36
LAMB1-202ENST00000393559 GRIN2BQ13224 1484 aa23.5■■□□□ 1.35
LAMB1-202ENST00000393559 MAGI1Q96QZ7 1491 aaPredicted RBP23.48■■□□□ 1.35
LAMB1-202ENST00000393559 WDR97A6NE52 1622 aa23.45■■□□□ 1.34
LAMB1-202ENST00000393559 SYNJ1O43426 1573 aa23.44■■□□□ 1.34
LAMB1-202ENST00000393559 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
LAMB1-202ENST00000393559 SYNJ2O15056 1496 aa23.43■■□□□ 1.34
LAMB1-202ENST00000393559 GAPVD1Q14C86 1478 aa23.4■■□□□ 1.34
LAMB1-202ENST00000393559 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
LAMB1-202ENST00000393559 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
LAMB1-202ENST00000393559 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
LAMB1-202ENST00000393559 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
LAMB1-202ENST00000393559 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
LAMB1-202ENST00000393559 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
LAMB1-202ENST00000393559 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
LAMB1-202ENST00000393559 ERCC6L2Q5T890 1561 aa23.13■■□□□ 1.29
LAMB1-202ENST00000393559 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
LAMB1-202ENST00000393559 NUP160Q12769 1436 aa23.08■■□□□ 1.29
LAMB1-202ENST00000393559 ADAMTS12P58397 1594 aa23.08■■□□□ 1.29
LAMB1-202ENST00000393559 CEP170Q5SW79 1584 aa23.08■■□□□ 1.29
LAMB1-202ENST00000393559 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
LAMB1-202ENST00000393559 BIVM-ERCC5R4GMW8 1640 aa23.02■■□□□ 1.28
LAMB1-202ENST00000393559 JPH4Q96JJ6 628 aa22.99■■□□□ 1.27
LAMB1-202ENST00000393559 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
LAMB1-202ENST00000393559 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
LAMB1-202ENST00000393559 SHROOM2Q13796 1616 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms