RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 MAP3K1Q13233 1512 aa7.27□□□□□ -1.25
RFC1-202ENST00000381897 ROCK2O75116 1388 aaKnown RBP7.27□□□□□ -1.25
RFC1-202ENST00000381897 CANXP27824 592 aaKnown RBP7.26□□□□□ -1.25
RFC1-202ENST00000381897 MFAP1P55081 439 aaKnown RBP7.26□□□□□ -1.25
RFC1-202ENST00000381897 RCAN3Q9UKA8 241 aa7.26□□□□□ -1.25
RFC1-202ENST00000381897 CCDC18Q5T9S5 1454 aa7.26□□□□□ -1.25
RFC1-202ENST00000381897 UACAQ9BZF9 1416 aa7.26□□□□□ -1.25
RFC1-202ENST00000381897 WASHC2AQ641Q2 1341 aa7.26□□□□□ -1.25
RFC1-202ENST00000381897 MTMR7Q9Y216 660 aa7.26□□□□□ -1.25
RFC1-202ENST00000381897 CSB-PGBD3P0DP91 1061 aa7.26□□□□□ -1.25
RFC1-202ENST00000381897 PIK3R5Q8WYR1 880 aa7.26□□□□□ -1.25
RFC1-202ENST00000381897 SLC24A3Q9HC58 644 aa7.26□□□□□ -1.25
RFC1-202ENST00000381897 MAPKBP1O60336 1514 aa7.25□□□□□ -1.25
RFC1-202ENST00000381897 TSC1Q92574 1164 aa7.25□□□□□ -1.25
RFC1-202ENST00000381897 RRP1P56182 461 aaKnown RBP7.25□□□□□ -1.25
RFC1-202ENST00000381897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.25□□□□□ -1.25
RFC1-202ENST00000381897 CWC22Q9HCG8 908 aaKnown RBP7.24□□□□□ -1.25
RFC1-202ENST00000381897 PRM3Q9NNZ6 103 aa7.24□□□□□ -1.25
RFC1-202ENST00000381897 LRRC9Q6ZRR7 1453 aa7.24□□□□□ -1.25
RFC1-202ENST00000381897 NFKBIBQ15653 356 aa7.24□□□□□ -1.25
RFC1-202ENST00000381897 AAMPQ13685 434 aa7.24□□□□□ -1.25
RFC1-202ENST00000381897 RALBP1Q15311 655 aa7.24□□□□□ -1.25
RFC1-202ENST00000381897 GOLGA6L1Q8N7Z2 621 aa7.24□□□□□ -1.25
RFC1-202ENST00000381897 PRPF38AQ8NAV1 312 aaKnown RBP7.24□□□□□ -1.25
RFC1-202ENST00000381897 BICRAQ9NZM4 1560 aa7.23□□□□□ -1.25
RFC1-202ENST00000381897 TIAM1Q13009 1591 aa7.23□□□□□ -1.25
RFC1-202ENST00000381897 CCDC7Q96M83 1385 aa7.23□□□□□ -1.25
RFC1-202ENST00000381897 GOLGA6L3A6NEY3 463 aa7.23□□□□□ -1.25
RFC1-202ENST00000381897 BRPF3Q9ULD4 1205 aa7.23□□□□□ -1.25
RFC1-202ENST00000381897 WASHC2CQ9Y4E1 1318 aa7.23□□□□□ -1.25
RFC1-202ENST00000381897 PRXQ9BXM0 1461 aa7.23□□□□□ -1.25
RFC1-202ENST00000381897 CHIC2Q9UKJ5 165 aa7.22□□□□□ -1.25
RFC1-202ENST00000381897 SENP3-EIF4A1A0A087X0R7 540 aa7.22□□□□□ -1.25
RFC1-202ENST00000381897 ANAPC15P60006 121 aa7.22□□□□□ -1.25
RFC1-202ENST00000381897 FRAT1Q92837 279 aaPredicted RBP7.22□□□□□ -1.25
RFC1-202ENST00000381897 PHLDB1Q86UU1 1377 aa7.22□□□□□ -1.25
RFC1-202ENST00000381897 FAM161AQ3B820 660 aa7.22□□□□□ -1.25
RFC1-202ENST00000381897 CCAR1Q8IX12 1150 aaKnown RBP7.22□□□□□ -1.25
RFC1-202ENST00000381897 RYDENQ9NUL5 291 aaKnown RBP7.22□□□□□ -1.25
RFC1-202ENST00000381897 RRP9O43818 475 aaKnown RBP7.22□□□□□ -1.25
RFC1-202ENST00000381897 BACH2Q9BYV9 841 aa7.22□□□□□ -1.25
RFC1-202ENST00000381897 KTN1Q86UP2 1357 aaKnown RBP7.21□□□□□ -1.25
RFC1-202ENST00000381897 CENPQQ7L2Z9 268 aaPredicted RBP7.21□□□□□ -1.25
RFC1-202ENST00000381897 OSCARQ8IYS5 282 aa7.21□□□□□ -1.26
RFC1-202ENST00000381897 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.21□□□□□ -1.26
RFC1-202ENST00000381897 CUX1P39880 1505 aa7.2□□□□□ -1.26
RFC1-202ENST00000381897 TOP2BQ02880 1626 aa7.2□□□□□ -1.26
RFC1-202ENST00000381897 GOLGA6L22H0YM25 854 aa7.2□□□□□ -1.26
RFC1-202ENST00000381897 KIF15Q9NS87 1388 aa7.2□□□□□ -1.26
RFC1-202ENST00000381897 CARMIL1Q5VZK9 1371 aa7.2□□□□□ -1.26
RFC1-202ENST00000381897 NEFHP12036 1026 aa7.19□□□□□ -1.26
RFC1-202ENST00000381897 RRP7BPQ9NSQ0 103 aa7.19□□□□□ -1.26
RFC1-202ENST00000381897 CCDC82Q8N4S0 544 aa7.19□□□□□ -1.26
RFC1-202ENST00000381897 NUTM2FA1L443 756 aa7.18□□□□□ -1.26
RFC1-202ENST00000381897 ANKRD62A6NC57 917 aa7.18□□□□□ -1.26
RFC1-202ENST00000381897 EXOC6Q8TAG9 804 aa7.18□□□□□ -1.26
RFC1-202ENST00000381897 MPHOSPH10O00566 681 aaKnown RBP7.18□□□□□ -1.26
RFC1-202ENST00000381897 FAM13BQ9NYF5 915 aa7.18□□□□□ -1.26
RFC1-202ENST00000381897 STAG3Q9UJ98 1225 aa7.18□□□□□ -1.26
RFC1-202ENST00000381897 CADPSQ9ULU8 1353 aa7.18□□□□□ -1.26
RFC1-202ENST00000381897 MYBBP1AQ9BQG0 1328 aaKnown RBP7.18□□□□□ -1.26
RFC1-202ENST00000381897 AKNAQ7Z591 1439 aa7.18□□□□□ -1.26
RFC1-202ENST00000381897 TPM2P07951 284 aa7.18□□□□□ -1.26
RFC1-202ENST00000381897 FGD6Q6ZV73 1430 aa7.17□□□□□ -1.26
RFC1-202ENST00000381897 CCDC27Q2M243 656 aa7.17□□□□□ -1.26
RFC1-202ENST00000381897 DNAJC5BQ9UF47 199 aa7.17□□□□□ -1.26
RFC1-202ENST00000381897 HFM1A2PYH4 1435 aa7.17□□□□□ -1.26
RFC1-202ENST00000381897 CARMIL2Q6F5E8 1435 aa7.17□□□□□ -1.26
RFC1-202ENST00000381897 RSPH4AQ5TD94 716 aa7.17□□□□□ -1.26
RFC1-202ENST00000381897 BCCIPQ9P287 314 aaKnown RBP eCLIP7.17□□□□□ -1.26
RFC1-202ENST00000381897 MSNP26038 577 aaKnown RBP7.17□□□□□ -1.26
RFC1-202ENST00000381897 ENOX2Q16206 610 aaKnown RBP7.17□□□□□ -1.26
RFC1-202ENST00000381897 PCMTD1Q96MG8 357 aaPredicted RBP7.17□□□□□ -1.26
RFC1-202ENST00000381897 WWC3Q9ULE0 1092 aa7.17□□□□□ -1.26
RFC1-202ENST00000381897 RGS3P49796 1198 aa7.16□□□□□ -1.26
RFC1-202ENST00000381897 CALR3Q96L12 384 aaKnown RBP7.16□□□□□ -1.26
RFC1-202ENST00000381897 MYH16Q9H6N6 1097 aa7.16□□□□□ -1.26
RFC1-202ENST00000381897 FYCO1Q9BQS8 1478 aa7.16□□□□□ -1.26
RFC1-202ENST00000381897 GOLGA2Q08379 1002 aa7.16□□□□□ -1.26
RFC1-202ENST00000381897 MAP7D2Q96T17 732 aa7.16□□□□□ -1.26
RFC1-202ENST00000381897 BRD4O60885 1362 aaPredicted RBP7.16□□□□□ -1.26
RFC1-202ENST00000381897 CLGNO14967 610 aa7.16□□□□□ -1.26
RFC1-202ENST00000381897 L3MBTL2Q969R5 705 aa7.16□□□□□ -1.26
RFC1-202ENST00000381897 MPHOSPH9Q99550 1183 aa7.16□□□□□ -1.26
RFC1-202ENST00000381897 DDX11L8A8MPP1 907 aa7.16□□□□□ -1.26
RFC1-202ENST00000381897 NLRP13Q86W25 1043 aa7.16□□□□□ -1.26
RFC1-202ENST00000381897 ISY1Q9ULR0 285 aaKnown RBP7.16□□□□□ -1.26
RFC1-202ENST00000381897 CARD11Q9BXL7 1154 aa7.15□□□□□ -1.26
RFC1-202ENST00000381897 MAPK8IP3Q9UPT6 1336 aa7.15□□□□□ -1.27
RFC1-202ENST00000381897 NCAPD3P42695 1498 aa7.15□□□□□ -1.27
RFC1-202ENST00000381897 KIF7Q2M1P5 1343 aa7.14□□□□□ -1.27
RFC1-202ENST00000381897 EIF3AQ14152 1382 aaKnown RBP7.14□□□□□ -1.27
RFC1-202ENST00000381897 NCOA2Q15596 1464 aa7.14□□□□□ -1.27
RFC1-202ENST00000381897 RGL2O15211 777 aa7.14□□□□□ -1.27
RFC1-202ENST00000381897 BRD3Q15059 726 aa7.14□□□□□ -1.27
RFC1-202ENST00000381897 SAMD1Q6SPF0 538 aaPredicted RBP7.14□□□□□ -1.27
RFC1-202ENST00000381897 HSCBQ8IWL3 235 aa7.14□□□□□ -1.27
RFC1-202ENST00000381897 GBP4Q96PP9 640 aa7.14□□□□□ -1.27
RFC1-202ENST00000381897 SRPK2P78362 688 aaKnown RBP7.14□□□□□ -1.27
RFC1-202ENST00000381897 LMOD3Q0VAK6 560 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms