RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 ABCC2Q92887 1545 aa16.31■□□□□ 0.2
TRIM23-203ENST00000381018 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
TRIM23-203ENST00000381018 E9PCH4 1651 aa16.29■□□□□ 0.2
TRIM23-203ENST00000381018 TRPM1Q7Z4N2 1603 aa16.29■□□□□ 0.2
TRIM23-203ENST00000381018 PLEKHH2Q8IVE3 1493 aa16.29■□□□□ 0.2
TRIM23-203ENST00000381018 IQGAP3Q86VI3 1631 aa16.28■□□□□ 0.2
TRIM23-203ENST00000381018 IRX6P78412 446 aaPredicted RBP16.28■□□□□ 0.2
TRIM23-203ENST00000381018 DCAF11Q8TEB1 546 aa16.27■□□□□ 0.2
TRIM23-203ENST00000381018 KDM2AQ9Y2K7 1162 aa16.27■□□□□ 0.19
TRIM23-203ENST00000381018 CCDC144AA2RUR9 1427 aa16.26■□□□□ 0.19
TRIM23-203ENST00000381018 ERCC6L2Q5T890 1561 aa16.26■□□□□ 0.19
TRIM23-203ENST00000381018 RBM19Q9Y4C8 960 aaKnown RBP16.25■□□□□ 0.19
TRIM23-203ENST00000381018 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
TRIM23-203ENST00000381018 LAMC1P11047 1609 aa16.24■□□□□ 0.19
TRIM23-203ENST00000381018 PRAG1Q86YV5 1406 aa16.23■□□□□ 0.19
TRIM23-203ENST00000381018 PPP4R2Q9NY27 417 aa16.23■□□□□ 0.19
TRIM23-203ENST00000381018 ZCCHC11Q5TAX3 1644 aaKnown RBP16.23■□□□□ 0.19
TRIM23-203ENST00000381018 ST20-MTHFSA0A0A6YYL1 179 aa16.22■□□□□ 0.19
TRIM23-203ENST00000381018 KTN1Q86UP2 1357 aaKnown RBP16.22■□□□□ 0.19
TRIM23-203ENST00000381018 SMG6Q86US8 1419 aaKnown RBP16.21■□□□□ 0.19
TRIM23-203ENST00000381018 EIF2AK4Q9P2K8 1649 aaKnown RBP16.21■□□□□ 0.19
TRIM23-203ENST00000381018 MAGI2Q86UL8 1455 aa16.21■□□□□ 0.18
TRIM23-203ENST00000381018 PLA2R1Q13018 1463 aa16.2■□□□□ 0.18
TRIM23-203ENST00000381018 CNGB1Q14028 1251 aaPredicted RBP16.2■□□□□ 0.18
TRIM23-203ENST00000381018 ERBINQ96RT1 1412 aa16.2■□□□□ 0.18
TRIM23-203ENST00000381018 A2MP01023 1474 aa16.19■□□□□ 0.18
TRIM23-203ENST00000381018 PLCH2O75038 1416 aa16.18■□□□□ 0.18
TRIM23-203ENST00000381018 TMC1Q8TDI8 760 aa16.18■□□□□ 0.18
TRIM23-203ENST00000381018 UHRF1BP1LA0JNW5 1464 aa16.18■□□□□ 0.18
TRIM23-203ENST00000381018 ABCC1P33527 1531 aa16.17■□□□□ 0.18
TRIM23-203ENST00000381018 CLASP1Q7Z460 1538 aa16.17■□□□□ 0.18
TRIM23-203ENST00000381018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRIM23-203ENST00000381018 ATP10AO60312 1499 aa16.17■□□□□ 0.18
TRIM23-203ENST00000381018 PRDM15P57071 1507 aaPredicted RBP16.17■□□□□ 0.18
TRIM23-203ENST00000381018 GPRASP1Q5JY77 1395 aa16.17■□□□□ 0.18
TRIM23-203ENST00000381018 PNISRQ8TF01 805 aaKnown RBP16.16■□□□□ 0.18
TRIM23-203ENST00000381018 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
TRIM23-203ENST00000381018 RALBP1Q15311 655 aa16.16■□□□□ 0.18
TRIM23-203ENST00000381018 ANP32EQ9BTT0 268 aa16.16■□□□□ 0.18
TRIM23-203ENST00000381018 MYBBP1AQ9BQG0 1328 aaKnown RBP16.16■□□□□ 0.18
TRIM23-203ENST00000381018 NUDCQ9Y266 331 aa16.14■□□□□ 0.17
TRIM23-203ENST00000381018 RGL3Q3MIN7 710 aa16.14■□□□□ 0.17
TRIM23-203ENST00000381018 EFCAB2Q5VUJ9 269 aa16.13■□□□□ 0.17
TRIM23-203ENST00000381018 LRPPRCP42704 1394 aaKnown RBP16.13■□□□□ 0.17
TRIM23-203ENST00000381018 COL17A1Q9UMD9 1497 aaPredicted RBP16.13■□□□□ 0.17
TRIM23-203ENST00000381018 RNF17Q9BXT8 1623 aaKnown RBP16.13■□□□□ 0.17
TRIM23-203ENST00000381018 ARAP3Q8WWN8 1544 aa16.11■□□□□ 0.17
TRIM23-203ENST00000381018 NBPF1Q3BBV0 1214 aa16.1■□□□□ 0.17
TRIM23-203ENST00000381018 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
TRIM23-203ENST00000381018 CEP152O94986 1710 aa16.09■□□□□ 0.17
TRIM23-203ENST00000381018 TRAPPC8Q9Y2L5 1435 aa16.09■□□□□ 0.17
TRIM23-203ENST00000381018 PARD3Q8TEW0 1356 aa16.09■□□□□ 0.17
TRIM23-203ENST00000381018 B4GALNT3Q6L9W6 998 aa16.08■□□□□ 0.17
TRIM23-203ENST00000381018 SPHKAPQ2M3C7 1700 aa16.08■□□□□ 0.16
TRIM23-203ENST00000381018 ZFYVE16Q7Z3T8 1539 aa16.07■□□□□ 0.16
TRIM23-203ENST00000381018 DEPDC5O75140 1603 aa16.07■□□□□ 0.16
TRIM23-203ENST00000381018 RTEL1-TNFRSF6BF6WH68 1400 aa16.07■□□□□ 0.16
TRIM23-203ENST00000381018 NLRP13Q86W25 1043 aa16.06■□□□□ 0.16
TRIM23-203ENST00000381018 FANCIQ9NVI1 1328 aa16.06■□□□□ 0.16
TRIM23-203ENST00000381018 MADDQ8WXG6 1647 aa16.05■□□□□ 0.16
TRIM23-203ENST00000381018 DISP3Q9P2K9 1392 aa16.05■□□□□ 0.16
TRIM23-203ENST00000381018 IQGAP1P46940 1657 aa16.05■□□□□ 0.16
TRIM23-203ENST00000381018 TRPM2O94759 1503 aa16.05■□□□□ 0.16
TRIM23-203ENST00000381018 TESK2Q96S53 571 aa16.05■□□□□ 0.16
TRIM23-203ENST00000381018 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
TRIM23-203ENST00000381018 SPAG9O60271 1321 aaKnown RBP16.04■□□□□ 0.16
TRIM23-203ENST00000381018 TET3O43151 1660 aa16.04■□□□□ 0.16
TRIM23-203ENST00000381018 PER1O15534 1290 aaPredicted RBP16.03■□□□□ 0.16
TRIM23-203ENST00000381018 ABCA9Q8IUA7 1624 aa16.02■□□□□ 0.16
TRIM23-203ENST00000381018 TMF1P82094 1093 aa16.02■□□□□ 0.16
TRIM23-203ENST00000381018 INO80Q9ULG1 1556 aaPredicted RBP16.02■□□□□ 0.15
TRIM23-203ENST00000381018 CLTCL1P53675 1640 aa16.01■□□□□ 0.15
TRIM23-203ENST00000381018 WDR7Q9Y4E6 1490 aa16■□□□□ 0.15
TRIM23-203ENST00000381018 ATP7AQ04656 1500 aa16■□□□□ 0.15
TRIM23-203ENST00000381018 ZMYM4Q5VZL5 1548 aa16■□□□□ 0.15
TRIM23-203ENST00000381018 SENP3-EIF4A1A0A087X0R7 540 aa15.99■□□□□ 0.15
TRIM23-203ENST00000381018 PTPRTO14522 1441 aa15.99■□□□□ 0.15
TRIM23-203ENST00000381018 INSRP06213 1382 aa15.98■□□□□ 0.15
TRIM23-203ENST00000381018 VWDEQ8N2E2 1590 aa15.97■□□□□ 0.15
TRIM23-203ENST00000381018 KIAA1210Q9ULL0 1709 aa15.97■□□□□ 0.15
TRIM23-203ENST00000381018 FANCAO15360 1455 aa15.97■□□□□ 0.15
TRIM23-203ENST00000381018 AFAP1Q8N556 730 aa15.97■□□□□ 0.15
TRIM23-203ENST00000381018 CCDC136Q96JN2 1154 aa15.97■□□□□ 0.15
TRIM23-203ENST00000381018 STAC3Q96MF2 364 aa15.97■□□□□ 0.15
TRIM23-203ENST00000381018 PANK3Q9H999 370 aa15.97■□□□□ 0.15
TRIM23-203ENST00000381018 MSH5O43196 834 aa15.96■□□□□ 0.15
TRIM23-203ENST00000381018 PDE3BQ13370 1112 aa15.96■□□□□ 0.15
TRIM23-203ENST00000381018 KANK1Q14678 1352 aa15.96■□□□□ 0.15
TRIM23-203ENST00000381018 CC2D1BQ5T0F9 858 aaKnown RBP15.95■□□□□ 0.14
TRIM23-203ENST00000381018 NEURL4Q96JN8 1562 aa15.95■□□□□ 0.14
TRIM23-203ENST00000381018 SCAPERQ9BY12 1400 aa15.95■□□□□ 0.14
TRIM23-203ENST00000381018 SYNMO15061 1565 aa15.95■□□□□ 0.14
TRIM23-203ENST00000381018 BLMP54132 1417 aaPredicted RBP15.95■□□□□ 0.14
TRIM23-203ENST00000381018 SCAF11Q99590 1463 aaKnown RBP15.94■□□□□ 0.14
TRIM23-203ENST00000381018 KIF1BO60333 1816 aa15.93■□□□□ 0.14
TRIM23-203ENST00000381018 RRP1P56182 461 aaKnown RBP15.92■□□□□ 0.14
TRIM23-203ENST00000381018 ADGRL1O94910 1474 aa15.92■□□□□ 0.14
TRIM23-203ENST00000381018 MROH1Q8NDA8 1641 aa15.92■□□□□ 0.14
TRIM23-203ENST00000381018 RCAN3Q9UKA8 241 aa15.91■□□□□ 0.14
TRIM23-203ENST00000381018 MYOM1P52179 1685 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms