RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 NISCHQ9Y2I1 1504 aa25.04■■□□□ 1.6
TRIM23-203ENST00000381018 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
TRIM23-203ENST00000381018 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
TRIM23-203ENST00000381018 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
TRIM23-203ENST00000381018 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
TRIM23-203ENST00000381018 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
TRIM23-203ENST00000381018 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
TRIM23-203ENST00000381018 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
TRIM23-203ENST00000381018 MYO15BQ96JP2 1530 aa20.08■□□□□ 0.81
TRIM23-203ENST00000381018 ABCC9O60706 1549 aa20.02■□□□□ 0.8
TRIM23-203ENST00000381018 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
TRIM23-203ENST00000381018 NACADO15069 1562 aa19.8■□□□□ 0.76
TRIM23-203ENST00000381018 RSF1Q96T23 1441 aaPredicted RBP19.74■□□□□ 0.75
TRIM23-203ENST00000381018 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
TRIM23-203ENST00000381018 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
TRIM23-203ENST00000381018 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
TRIM23-203ENST00000381018 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
TRIM23-203ENST00000381018 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
TRIM23-203ENST00000381018 HRCP23327 699 aa19.41■□□□□ 0.7
TRIM23-203ENST00000381018 PCGF6Q9BYE7 350 aa19.38■□□□□ 0.69
TRIM23-203ENST00000381018 WIZO95785 1651 aa19.35■□□□□ 0.69
TRIM23-203ENST00000381018 TRIM41Q8WV44 630 aa19.32■□□□□ 0.68
TRIM23-203ENST00000381018 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
TRIM23-203ENST00000381018 UNC13AQ9UPW8 1703 aa19.24■□□□□ 0.67
TRIM23-203ENST00000381018 SMARCA4P51532 1647 aa19.13■□□□□ 0.65
TRIM23-203ENST00000381018 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
TRIM23-203ENST00000381018 TRIM26Q12899 539 aaPredicted RBP19.12■□□□□ 0.65
TRIM23-203ENST00000381018 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
TRIM23-203ENST00000381018 FAM9AQ8IZU1 332 aaPredicted RBP19.07■□□□□ 0.64
TRIM23-203ENST00000381018 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
TRIM23-203ENST00000381018 CCDC88BA6NC98 1476 aa18.93■□□□□ 0.62
TRIM23-203ENST00000381018 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
TRIM23-203ENST00000381018 PPARGC1BQ86YN6 1023 aaKnown RBP18.9■□□□□ 0.62
TRIM23-203ENST00000381018 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
TRIM23-203ENST00000381018 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
TRIM23-203ENST00000381018 PEG3Q9GZU2 1588 aa18.8■□□□□ 0.6
TRIM23-203ENST00000381018 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
TRIM23-203ENST00000381018 ZEB1P37275 1124 aaPredicted RBP18.73■□□□□ 0.59
TRIM23-203ENST00000381018 EEA1Q15075 1411 aa18.65■□□□□ 0.58
TRIM23-203ENST00000381018 SOGA1O94964 1423 aa18.61■□□□□ 0.57
TRIM23-203ENST00000381018 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.56
TRIM23-203ENST00000381018 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
TRIM23-203ENST00000381018 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
TRIM23-203ENST00000381018 CEP162Q5TB80 1403 aa18.55■□□□□ 0.56
TRIM23-203ENST00000381018 TNIKQ9UKE5 1360 aa18.54■□□□□ 0.56
TRIM23-203ENST00000381018 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.55
TRIM23-203ENST00000381018 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.55
TRIM23-203ENST00000381018 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
TRIM23-203ENST00000381018 GOLGA3Q08378 1498 aa18.48■□□□□ 0.55
TRIM23-203ENST00000381018 KIF21BO75037 1637 aa18.43■□□□□ 0.54
TRIM23-203ENST00000381018 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
TRIM23-203ENST00000381018 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
TRIM23-203ENST00000381018 TOP2BQ02880 1626 aa18.33■□□□□ 0.53
TRIM23-203ENST00000381018 HMGXB3Q12766 1538 aa18.32■□□□□ 0.52
TRIM23-203ENST00000381018 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
TRIM23-203ENST00000381018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.29■□□□□ 0.52
TRIM23-203ENST00000381018 CCER1Q8TC90 406 aaPredicted RBP18.29■□□□□ 0.52
TRIM23-203ENST00000381018 NCAPD3P42695 1498 aa18.26■□□□□ 0.51
TRIM23-203ENST00000381018 TTBK1Q5TCY1 1321 aaPredicted RBP18.24■□□□□ 0.51
TRIM23-203ENST00000381018 CLIP1P30622 1438 aa18.22■□□□□ 0.51
TRIM23-203ENST00000381018 RAPGEF2Q9Y4G8 1499 aa18.2■□□□□ 0.5
TRIM23-203ENST00000381018 VPS8Q8N3P4 1428 aa18.16■□□□□ 0.5
TRIM23-203ENST00000381018 PRDM2Q13029 1718 aa18.14■□□□□ 0.49
TRIM23-203ENST00000381018 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.49
TRIM23-203ENST00000381018 CUX1P39880 1505 aa18.11■□□□□ 0.49
TRIM23-203ENST00000381018 CFTRP13569 1480 aa18.09■□□□□ 0.49
TRIM23-203ENST00000381018 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
TRIM23-203ENST00000381018 APLP2Q06481 763 aa18.02■□□□□ 0.48
TRIM23-203ENST00000381018 KIF27Q86VH2 1401 aa18.01■□□□□ 0.47
TRIM23-203ENST00000381018 RANGAP1P46060 587 aaPredicted RBP17.95■□□□□ 0.46
TRIM23-203ENST00000381018 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
TRIM23-203ENST00000381018 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
TRIM23-203ENST00000381018 DIEXFQ68CQ4 756 aaKnown RBP17.89■□□□□ 0.45
TRIM23-203ENST00000381018 CADPSQ9ULU8 1353 aa17.86■□□□□ 0.45
TRIM23-203ENST00000381018 CC2D2AQ9P2K1 1620 aa17.84■□□□□ 0.45
TRIM23-203ENST00000381018 CUX2O14529 1486 aa17.82■□□□□ 0.44
TRIM23-203ENST00000381018 ZNF316A6NFI3 1004 aaPredicted RBP17.8■□□□□ 0.44
TRIM23-203ENST00000381018 ARHGAP35Q9NRY4 1499 aa17.8■□□□□ 0.44
TRIM23-203ENST00000381018 FGD5Q6ZNL6 1462 aa17.79■□□□□ 0.44
TRIM23-203ENST00000381018 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
TRIM23-203ENST00000381018 IGF1RP08069 1367 aa17.76■□□□□ 0.43
TRIM23-203ENST00000381018 KANK4Q5T7N3 995 aaPredicted RBP17.74■□□□□ 0.43
TRIM23-203ENST00000381018 RRBP1Q9P2E9 1410 aaKnown RBP17.73■□□□□ 0.43
TRIM23-203ENST00000381018 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
TRIM23-203ENST00000381018 ACIN1Q9UKV3 1341 aaKnown RBP17.7■□□□□ 0.42
TRIM23-203ENST00000381018 CARMIL1Q5VZK9 1371 aa17.7■□□□□ 0.42
TRIM23-203ENST00000381018 CLSPNQ9HAW4 1339 aa17.69■□□□□ 0.42
TRIM23-203ENST00000381018 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
TRIM23-203ENST00000381018 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
TRIM23-203ENST00000381018 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
TRIM23-203ENST00000381018 TIAM1Q13009 1591 aa17.65■□□□□ 0.42
TRIM23-203ENST00000381018 DHX57Q6P158 1386 aaKnown RBP17.65■□□□□ 0.42
TRIM23-203ENST00000381018 NEUROD1Q13562 356 aa17.63■□□□□ 0.41
TRIM23-203ENST00000381018 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
TRIM23-203ENST00000381018 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
TRIM23-203ENST00000381018 TOPBP1Q92547 1522 aa17.6■□□□□ 0.41
TRIM23-203ENST00000381018 CUL7Q14999 1698 aa17.59■□□□□ 0.41
TRIM23-203ENST00000381018 CFAP43Q8NDM7 1665 aa17.59■□□□□ 0.41
TRIM23-203ENST00000381018 POLA1P09884 1462 aaPredicted RBP17.58■□□□□ 0.4
TRIM23-203ENST00000381018 FHAD1B1AJZ9 1412 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms