RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 LTBP4Q8N2S1 1624 aa21.52■■□□□ 1.03
PRPF18-202ENST00000378572 PKD2Q13563 968 aa21.5■■□□□ 1.03
PRPF18-202ENST00000378572 TNRQ92752 1358 aa21.5■■□□□ 1.03
PRPF18-202ENST00000378572 A2ML1A8K2U0 1454 aa21.5■■□□□ 1.03
PRPF18-202ENST00000378572 KANK4Q5T7N3 995 aaPredicted RBP21.49■■□□□ 1.03
PRPF18-202ENST00000378572 FAM135AQ9P2D6 1515 aa21.49■■□□□ 1.03
PRPF18-202ENST00000378572 PZPP20742 1482 aa21.47■■□□□ 1.03
PRPF18-202ENST00000378572 ZNF335Q9H4Z2 1342 aaPredicted RBP21.47■■□□□ 1.03
PRPF18-202ENST00000378572 APLP2Q06481 763 aa21.47■■□□□ 1.03
PRPF18-202ENST00000378572 FBXO31Q5XUX0 539 aaPredicted RBP21.47■■□□□ 1.03
PRPF18-202ENST00000378572 MYOM3Q5VTT5 1437 aa21.47■■□□□ 1.03
PRPF18-202ENST00000378572 DNMT1P26358 1616 aaKnown RBP21.46■■□□□ 1.03
PRPF18-202ENST00000378572 MAP3K1Q13233 1512 aa21.46■■□□□ 1.03
PRPF18-202ENST00000378572 TCOF1Q13428 1488 aaKnown RBP21.46■■□□□ 1.03
PRPF18-202ENST00000378572 IQSEC2Q5JU85 1478 aa21.45■■□□□ 1.02
PRPF18-202ENST00000378572 MAST1Q9Y2H9 1570 aa21.44■■□□□ 1.02
PRPF18-202ENST00000378572 MIA2Q96PC5 1412 aa21.43■■□□□ 1.02
PRPF18-202ENST00000378572 POLR1AO95602 1720 aaPredicted RBP21.42■■□□□ 1.02
PRPF18-202ENST00000378572 RNF17Q9BXT8 1623 aaKnown RBP21.41■■□□□ 1.02
PRPF18-202ENST00000378572 EIF2AK4Q9P2K8 1649 aaKnown RBP21.39■■□□□ 1.02
PRPF18-202ENST00000378572 ZC3H13Q5T200 1668 aaKnown RBP21.39■■□□□ 1.01
PRPF18-202ENST00000378572 DISP3Q9P2K9 1392 aa21.39■■□□□ 1.01
PRPF18-202ENST00000378572 ABCC3O15438 1527 aa21.38■■□□□ 1.01
PRPF18-202ENST00000378572 UBAP1LF5GYI3 381 aa21.38■■□□□ 1.01
PRPF18-202ENST00000378572 NLRP1Q9C000 1473 aa21.37■■□□□ 1.01
PRPF18-202ENST00000378572 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.36■■□□□ 1.01
PRPF18-202ENST00000378572 UGGT1Q9NYU2 1555 aa21.36■■□□□ 1.01
PRPF18-202ENST00000378572 DUOX2Q9NRD8 1548 aa21.35■■□□□ 1.01
PRPF18-202ENST00000378572 PTPN23Q9H3S7 1636 aa21.35■■□□□ 1.01
PRPF18-202ENST00000378572 CEP152O94986 1710 aa21.34■■□□□ 1.01
PRPF18-202ENST00000378572 NEURL4Q96JN8 1562 aa21.34■■□□□ 1.01
PRPF18-202ENST00000378572 ANKLE2Q86XL3 938 aa21.34■■□□□ 1.01
PRPF18-202ENST00000378572 THEMISQ8N1K5 641 aaPredicted RBP21.34■■□□□ 1.01
PRPF18-202ENST00000378572 CROCC2H7BZ55 1655 aa21.33■■□□□ 1.01
PRPF18-202ENST00000378572 KIF15Q9NS87 1388 aa21.33■■□□□ 1
PRPF18-202ENST00000378572 SPATA31D1Q6ZQQ2 1576 aa21.31■■□□□ 1
PRPF18-202ENST00000378572 MROH1Q8NDA8 1641 aa21.31■■□□□ 1
PRPF18-202ENST00000378572 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
PRPF18-202ENST00000378572 SHANK2Q9UPX8 1470 aa21.31■■□□□ 1
PRPF18-202ENST00000378572 RRP7BPQ9NSQ0 103 aa21.3■■□□□ 1
PRPF18-202ENST00000378572 ERVK-7P63135 1459 aa21.3■■□□□ 1
PRPF18-202ENST00000378572 ABCC5O15440 1437 aa21.29■■□□□ 1
PRPF18-202ENST00000378572 NPHP4O75161 1426 aaPredicted RBP21.28■■□□□ 1
PRPF18-202ENST00000378572 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.28■■□□□ 1
PRPF18-202ENST00000378572 DAPK1P53355 1430 aa21.27■■□□□ 1
PRPF18-202ENST00000378572 FGD6Q6ZV73 1430 aa21.27■■□□□ 1
PRPF18-202ENST00000378572 CFAP65Q6ZU64 1925 aaKnown RBP21.27■■□□□ 1
PRPF18-202ENST00000378572 CPS1P31327 1500 aa21.27■■□□□ 1
PRPF18-202ENST00000378572 ERBINQ96RT1 1412 aa21.27■■□□□ 1
PRPF18-202ENST00000378572 DEPDC5O75140 1603 aa21.25■□□□□ 0.99
PRPF18-202ENST00000378572 PRDM15P57071 1507 aaPredicted RBP21.25■□□□□ 0.99
PRPF18-202ENST00000378572 IQGAP1P46940 1657 aa21.24■□□□□ 0.99
PRPF18-202ENST00000378572 CHIC2Q9UKJ5 165 aa21.24■□□□□ 0.99
PRPF18-202ENST00000378572 KANK1Q14678 1352 aa21.23■□□□□ 0.99
PRPF18-202ENST00000378572 PIP4K2BP78356 416 aa21.23■□□□□ 0.99
PRPF18-202ENST00000378572 ANKRD30AQ9BXX3 1397 aa21.21■□□□□ 0.99
PRPF18-202ENST00000378572 VWDEQ8N2E2 1590 aa21.21■□□□□ 0.99
PRPF18-202ENST00000378572 MED14O60244 1454 aa21.21■□□□□ 0.99
PRPF18-202ENST00000378572 UBR1Q8IWV7 1749 aa21.2■□□□□ 0.98
PRPF18-202ENST00000378572 TOM1O60784 492 aa21.19■□□□□ 0.98
PRPF18-202ENST00000378572 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
PRPF18-202ENST00000378572 ILDR2Q71H61 639 aa21.18■□□□□ 0.98
PRPF18-202ENST00000378572 STAG3Q9UJ98 1225 aa21.17■□□□□ 0.98
PRPF18-202ENST00000378572 ARHGAP31Q2M1Z3 1444 aa21.16■□□□□ 0.98
PRPF18-202ENST00000378572 SCAF11Q99590 1463 aaKnown RBP21.15■□□□□ 0.98
PRPF18-202ENST00000378572 PIK3C2BO00750 1634 aa21.13■□□□□ 0.97
PRPF18-202ENST00000378572 TXNDC2Q86VQ3 553 aa21.12■□□□□ 0.97
PRPF18-202ENST00000378572 EID1Q9Y6B2 187 aa21.12■□□□□ 0.97
PRPF18-202ENST00000378572 SYNMO15061 1565 aa21.11■□□□□ 0.97
PRPF18-202ENST00000378572 HSPA1LP34931 641 aa21.11■□□□□ 0.97
PRPF18-202ENST00000378572 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
PRPF18-202ENST00000378572 SLIT1O75093 1534 aa21.09■□□□□ 0.97
PRPF18-202ENST00000378572 STRCP1A6NGW2 1772 aa21.09■□□□□ 0.97
PRPF18-202ENST00000378572 LMTK2Q8IWU2 1503 aa21.08■□□□□ 0.96
PRPF18-202ENST00000378572 ARHGAP23Q9P227 1491 aa21.08■□□□□ 0.96
PRPF18-202ENST00000378572 LTKP29376 864 aa21.07■□□□□ 0.96
PRPF18-202ENST00000378572 ADGRL2O95490 1459 aa21.07■□□□□ 0.96
PRPF18-202ENST00000378572 EFCAB6Q5THR3 1501 aa21.07■□□□□ 0.96
PRPF18-202ENST00000378572 LRRC7Q96NW7 1537 aa21.07■□□□□ 0.96
PRPF18-202ENST00000378572 SOCS7O14512 581 aa21.06■□□□□ 0.96
PRPF18-202ENST00000378572 TMEM2Q9UHN6 1383 aa21.04■□□□□ 0.96
PRPF18-202ENST00000378572 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
PRPF18-202ENST00000378572 IDI1Q13907 227 aa21.01■□□□□ 0.95
PRPF18-202ENST00000378572 ADGRB3O60242 1522 aa21.01■□□□□ 0.95
PRPF18-202ENST00000378572 MED1Q15648 1581 aaPredicted RBP21.01■□□□□ 0.95
PRPF18-202ENST00000378572 BCANQ96GW7 911 aa21.01■□□□□ 0.95
PRPF18-202ENST00000378572 KDM5AP29375 1690 aaKnown RBP21■□□□□ 0.95
PRPF18-202ENST00000378572 ALKQ9UM73 1620 aa21■□□□□ 0.95
PRPF18-202ENST00000378572 NOS1P29475 1434 aa20.98■□□□□ 0.95
PRPF18-202ENST00000378572 TET3O43151 1660 aa20.96■□□□□ 0.95
PRPF18-202ENST00000378572 ITGAEP38570 1179 aa20.95■□□□□ 0.94
PRPF18-202ENST00000378572 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
PRPF18-202ENST00000378572 RPRD2Q5VT52 1461 aaKnown RBP20.95■□□□□ 0.94
PRPF18-202ENST00000378572 SLC26A8Q96RN1 970 aa20.95■□□□□ 0.94
PRPF18-202ENST00000378572 SLC52A1Q9NWF4 448 aa20.95■□□□□ 0.94
PRPF18-202ENST00000378572 PPP1R15AO75807 674 aaPredicted RBP20.93■□□□□ 0.94
PRPF18-202ENST00000378572 CHGAP10645 457 aaKnown RBP20.92■□□□□ 0.94
PRPF18-202ENST00000378572 UNC13BO14795 1591 aa20.92■□□□□ 0.94
PRPF18-202ENST00000378572 GCC2Q8IWJ2 1684 aa20.92■□□□□ 0.94
PRPF18-202ENST00000378572 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms