RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CEP170BQ9Y4F5 1589 aaPredicted RBP23.25■■□□□ 1.31
HDAC6-204ENST00000376643 MIA2Q96PC5 1412 aa23.25■■□□□ 1.31
HDAC6-204ENST00000376643 APLP2Q06481 763 aa23.24■■□□□ 1.31
HDAC6-204ENST00000376643 IQSEC2Q5JU85 1478 aa23.24■■□□□ 1.31
HDAC6-204ENST00000376643 WASHC2CQ9Y4E1 1318 aa23.22■■□□□ 1.31
HDAC6-204ENST00000376643 A2ML1A8K2U0 1454 aa23.2■■□□□ 1.3
HDAC6-204ENST00000376643 PZPP20742 1482 aa23.2■■□□□ 1.3
HDAC6-204ENST00000376643 MYOM3Q5VTT5 1437 aa23.2■■□□□ 1.3
HDAC6-204ENST00000376643 MAST1Q9Y2H9 1570 aa23.19■■□□□ 1.3
HDAC6-204ENST00000376643 TCOF1Q13428 1488 aaKnown RBP23.17■■□□□ 1.3
HDAC6-204ENST00000376643 TNRQ92752 1358 aa23.17■■□□□ 1.3
HDAC6-204ENST00000376643 LTBP4Q8N2S1 1624 aa23.15■■□□□ 1.3
HDAC6-204ENST00000376643 NCKAP5LQ9HCH0 1330 aa23.14■■□□□ 1.3
HDAC6-204ENST00000376643 EIF2AK4Q9P2K8 1649 aaKnown RBP23.13■■□□□ 1.29
HDAC6-204ENST00000376643 KANK4Q5T7N3 995 aaPredicted RBP23.13■■□□□ 1.29
HDAC6-204ENST00000376643 NLRP1Q9C000 1473 aa23.12■■□□□ 1.29
HDAC6-204ENST00000376643 ZC3H13Q5T200 1668 aaKnown RBP23.11■■□□□ 1.29
HDAC6-204ENST00000376643 DNMT1P26358 1616 aaKnown RBP23.11■■□□□ 1.29
HDAC6-204ENST00000376643 RNF17Q9BXT8 1623 aaKnown RBP23.11■■□□□ 1.29
HDAC6-204ENST00000376643 THEMISQ8N1K5 641 aaPredicted RBP23.09■■□□□ 1.29
HDAC6-204ENST00000376643 SHANK2Q9UPX8 1470 aa23.08■■□□□ 1.29
HDAC6-204ENST00000376643 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.28
HDAC6-204ENST00000376643 FBXO31Q5XUX0 539 aaPredicted RBP23.07■■□□□ 1.28
HDAC6-204ENST00000376643 ANKLE2Q86XL3 938 aa23.05■■□□□ 1.28
HDAC6-204ENST00000376643 ZNF335Q9H4Z2 1342 aaPredicted RBP23.05■■□□□ 1.28
HDAC6-204ENST00000376643 ABCC3O15438 1527 aa23.04■■□□□ 1.28
HDAC6-204ENST00000376643 UGGT1Q9NYU2 1555 aa23.02■■□□□ 1.28
HDAC6-204ENST00000376643 ERBINQ96RT1 1412 aa23.02■■□□□ 1.28
HDAC6-204ENST00000376643 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
HDAC6-204ENST00000376643 KIF15Q9NS87 1388 aa23.01■■□□□ 1.27
HDAC6-204ENST00000376643 PTPN23Q9H3S7 1636 aa23■■□□□ 1.27
HDAC6-204ENST00000376643 SPATA31D1Q6ZQQ2 1576 aa23■■□□□ 1.27
HDAC6-204ENST00000376643 CPS1P31327 1500 aa22.98■■□□□ 1.27
HDAC6-204ENST00000376643 ABCC5O15440 1437 aa22.98■■□□□ 1.27
HDAC6-204ENST00000376643 FGD6Q6ZV73 1430 aa22.98■■□□□ 1.27
HDAC6-204ENST00000376643 CROCC2H7BZ55 1655 aa22.97■■□□□ 1.27
HDAC6-204ENST00000376643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.97■■□□□ 1.27
HDAC6-204ENST00000376643 ERVK-7P63135 1459 aa22.97■■□□□ 1.27
HDAC6-204ENST00000376643 UBAP1LF5GYI3 381 aa22.96■■□□□ 1.27
HDAC6-204ENST00000376643 KANK1Q14678 1352 aa22.96■■□□□ 1.27
HDAC6-204ENST00000376643 DAPK1P53355 1430 aa22.96■■□□□ 1.27
HDAC6-204ENST00000376643 DEPDC5O75140 1603 aa22.96■■□□□ 1.27
HDAC6-204ENST00000376643 PRDM15P57071 1507 aaPredicted RBP22.95■■□□□ 1.26
HDAC6-204ENST00000376643 MROH1Q8NDA8 1641 aa22.95■■□□□ 1.26
HDAC6-204ENST00000376643 ANKRD30AQ9BXX3 1397 aa22.95■■□□□ 1.26
HDAC6-204ENST00000376643 NEURL4Q96JN8 1562 aa22.94■■□□□ 1.26
HDAC6-204ENST00000376643 MED14O60244 1454 aa22.94■■□□□ 1.26
HDAC6-204ENST00000376643 ARHGAP31Q2M1Z3 1444 aa22.94■■□□□ 1.26
HDAC6-204ENST00000376643 NPHP4O75161 1426 aaPredicted RBP22.93■■□□□ 1.26
HDAC6-204ENST00000376643 RRP7BPQ9NSQ0 103 aa22.93■■□□□ 1.26
HDAC6-204ENST00000376643 DISP3Q9P2K9 1392 aa22.89■■□□□ 1.26
HDAC6-204ENST00000376643 CEP152O94986 1710 aa22.88■■□□□ 1.25
HDAC6-204ENST00000376643 TOM1O60784 492 aa22.88■■□□□ 1.25
HDAC6-204ENST00000376643 IQGAP1P46940 1657 aa22.85■■□□□ 1.25
HDAC6-204ENST00000376643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.84■■□□□ 1.252e-7■■□□□ 14
HDAC6-204ENST00000376643 EID1Q9Y6B2 187 aa22.83■■□□□ 1.25
HDAC6-204ENST00000376643 LMTK2Q8IWU2 1503 aa22.82■■□□□ 1.24
HDAC6-204ENST00000376643 VWDEQ8N2E2 1590 aa22.82■■□□□ 1.24
HDAC6-204ENST00000376643 ADGRL2O95490 1459 aa22.82■■□□□ 1.24
HDAC6-204ENST00000376643 SCAF11Q99590 1463 aaKnown RBP22.82■■□□□ 1.24
HDAC6-204ENST00000376643 UBR1Q8IWV7 1749 aa22.8■■□□□ 1.24
HDAC6-204ENST00000376643 STAG3Q9UJ98 1225 aa22.8■■□□□ 1.24
HDAC6-204ENST00000376643 CHIC2Q9UKJ5 165 aa22.8■■□□□ 1.24
HDAC6-204ENST00000376643 SLIT1O75093 1534 aa22.79■■□□□ 1.24
HDAC6-204ENST00000376643 FAM50AQ14320 339 aaKnown RBP22.79■■□□□ 1.24
HDAC6-204ENST00000376643 ARHGAP23Q9P227 1491 aa22.78■■□□□ 1.24
HDAC6-204ENST00000376643 SCAF1Q9H7N4 1312 aaKnown RBP22.78■■□□□ 1.24
HDAC6-204ENST00000376643 SYNMO15061 1565 aa22.76■■□□□ 1.23
HDAC6-204ENST00000376643 TXNDC2Q86VQ3 553 aa22.76■■□□□ 1.23
HDAC6-204ENST00000376643 KDM5AP29375 1690 aaKnown RBP22.75■■□□□ 1.23
HDAC6-204ENST00000376643 CFAP65Q6ZU64 1925 aaKnown RBP22.74■■□□□ 1.23
HDAC6-204ENST00000376643 ANKRD50Q9ULJ7 1429 aa22.74■■□□□ 1.23
HDAC6-204ENST00000376643 TMEM2Q9UHN6 1383 aa22.73■■□□□ 1.23
HDAC6-204ENST00000376643 RPRD2Q5VT52 1461 aaKnown RBP22.73■■□□□ 1.23
HDAC6-204ENST00000376643 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
HDAC6-204ENST00000376643 PIP4K2BP78356 416 aa22.72■■□□□ 1.23
HDAC6-204ENST00000376643 SLC52A1Q9NWF4 448 aa22.72■■□□□ 1.23
HDAC6-204ENST00000376643 PIK3C2BO00750 1634 aa22.7■■□□□ 1.22
HDAC6-204ENST00000376643 NOS1P29475 1434 aa22.69■■□□□ 1.22
HDAC6-204ENST00000376643 LRRC7Q96NW7 1537 aa22.68■■□□□ 1.22
HDAC6-204ENST00000376643 LTKP29376 864 aa22.68■■□□□ 1.22
HDAC6-204ENST00000376643 IDI1Q13907 227 aa22.67■■□□□ 1.22
HDAC6-204ENST00000376643 ROCK1Q13464 1354 aa22.65■■□□□ 1.22
HDAC6-204ENST00000376643 HSPA1LP34931 641 aa22.65■■□□□ 1.22
HDAC6-204ENST00000376643 HDGFP51858 240 aaKnown RBP22.65■■□□□ 1.22
HDAC6-204ENST00000376643 ADGRB3O60242 1522 aa22.64■■□□□ 1.21
HDAC6-204ENST00000376643 SOCS7O14512 581 aa22.64■■□□□ 1.21
HDAC6-204ENST00000376643 ILDR2Q71H61 639 aa22.62■■□□□ 1.21
HDAC6-204ENST00000376643 TET3O43151 1660 aa22.62■■□□□ 1.21
HDAC6-204ENST00000376643 STRCP1A6NGW2 1772 aa22.6■■□□□ 1.21
HDAC6-204ENST00000376643 UNC13BO14795 1591 aa22.59■■□□□ 1.21
HDAC6-204ENST00000376643 KCNA6P17658 529 aa22.57■■□□□ 1.2
HDAC6-204ENST00000376643 GCC2Q8IWJ2 1684 aa22.56■■□□□ 1.2
HDAC6-204ENST00000376643 BCANQ96GW7 911 aa22.55■■□□□ 1.2
HDAC6-204ENST00000376643 ALKQ9UM73 1620 aa22.54■■□□□ 1.2
HDAC6-204ENST00000376643 PPP1R15AO75807 674 aaPredicted RBP22.54■■□□□ 1.2
HDAC6-204ENST00000376643 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.54■■□□□ 1.2
HDAC6-204ENST00000376643 NKTRP30414 1462 aaKnown RBP22.53■■□□□ 1.2
HDAC6-204ENST00000376643 MED1Q15648 1581 aaPredicted RBP22.52■■□□□ 1.2
HDAC6-204ENST00000376643 PLEKHG1Q9ULL1 1385 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms