RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 KIF15Q9NS87 1388 aa17.03■□□□□ 0.32
CSGALNACT2-201ENST00000374466 YEATS2Q9ULM3 1422 aa17.02■□□□□ 0.32
CSGALNACT2-201ENST00000374466 EFCAB6Q5THR3 1501 aa17.02■□□□□ 0.32
CSGALNACT2-201ENST00000374466 ANKRD50Q9ULJ7 1429 aa17.02■□□□□ 0.31
CSGALNACT2-201ENST00000374466 PIK3C2BO00750 1634 aa17.01■□□□□ 0.31
CSGALNACT2-201ENST00000374466 ABCC3O15438 1527 aa17.01■□□□□ 0.31
CSGALNACT2-201ENST00000374466 CNTLNQ9NXG0 1405 aa17■□□□□ 0.31
CSGALNACT2-201ENST00000374466 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.31
CSGALNACT2-201ENST00000374466 PZPP20742 1482 aa16.98■□□□□ 0.31
CSGALNACT2-201ENST00000374466 FER1L4A9Z1Z3 1794 aa16.97■□□□□ 0.31
CSGALNACT2-201ENST00000374466 SPATA31D1Q6ZQQ2 1576 aa16.97■□□□□ 0.31
CSGALNACT2-201ENST00000374466 TSPY4P0CV99 314 aa16.97■□□□□ 0.31
CSGALNACT2-201ENST00000374466 TSPY10P0CW01 314 aa16.97■□□□□ 0.31
CSGALNACT2-201ENST00000374466 E9PCH4 1651 aa16.97■□□□□ 0.31
CSGALNACT2-201ENST00000374466 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
CSGALNACT2-201ENST00000374466 CEP152O94986 1710 aa16.96■□□□□ 0.31
CSGALNACT2-201ENST00000374466 PTPRTO14522 1441 aa16.95■□□□□ 0.3
CSGALNACT2-201ENST00000374466 SPHKAPQ2M3C7 1700 aa16.95■□□□□ 0.3
CSGALNACT2-201ENST00000374466 AFAP1Q8N556 730 aa16.93■□□□□ 0.3
CSGALNACT2-201ENST00000374466 PREX1Q8TCU6 1659 aa16.92■□□□□ 0.3
CSGALNACT2-201ENST00000374466 TRPM2O94759 1503 aa16.92■□□□□ 0.3
CSGALNACT2-201ENST00000374466 CLSPNQ9HAW4 1339 aa16.91■□□□□ 0.3
CSGALNACT2-201ENST00000374466 NPATQ14207 1427 aa16.91■□□□□ 0.3
CSGALNACT2-201ENST00000374466 C3P01024 1663 aa16.9■□□□□ 0.3
CSGALNACT2-201ENST00000374466 CLTCQ00610 1675 aaKnown RBP16.9■□□□□ 0.3
CSGALNACT2-201ENST00000374466 RAB3GAP2Q9H2M9 1393 aa16.88■□□□□ 0.29
CSGALNACT2-201ENST00000374466 NOS1P29475 1434 aa16.88■□□□□ 0.29
CSGALNACT2-201ENST00000374466 RAPGEF3O95398 923 aa16.87■□□□□ 0.29
CSGALNACT2-201ENST00000374466 IFT172Q9UG01 1749 aa16.86■□□□□ 0.29
CSGALNACT2-201ENST00000374466 FAM50AQ14320 339 aaKnown RBP16.85■□□□□ 0.29
CSGALNACT2-201ENST00000374466 MADDQ8WXG6 1647 aa16.84■□□□□ 0.29
CSGALNACT2-201ENST00000374466 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.29
CSGALNACT2-201ENST00000374466 ZNF777Q9ULD5 760 aaPredicted RBP16.83■□□□□ 0.29
CSGALNACT2-201ENST00000374466 SYNMO15061 1565 aa16.83■□□□□ 0.28
CSGALNACT2-201ENST00000374466 KANK1Q14678 1352 aa16.79■□□□□ 0.28
CSGALNACT2-201ENST00000374466 ERVK-7P63135 1459 aa16.79■□□□□ 0.28
CSGALNACT2-201ENST00000374466 ADGRB3O60242 1522 aa16.78■□□□□ 0.28
CSGALNACT2-201ENST00000374466 RIMS1Q86UR5 1692 aaKnown RBP16.78■□□□□ 0.28
CSGALNACT2-201ENST00000374466 MYO3AQ8NEV4 1616 aa16.77■□□□□ 0.28
CSGALNACT2-201ENST00000374466 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.27
CSGALNACT2-201ENST00000374466 PLA2R1Q13018 1463 aa16.76■□□□□ 0.27
CSGALNACT2-201ENST00000374466 NLRP1Q9C000 1473 aa16.76■□□□□ 0.27
CSGALNACT2-201ENST00000374466 TMEM131LA2VDJ0 1609 aa16.75■□□□□ 0.27
CSGALNACT2-201ENST00000374466 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
CSGALNACT2-201ENST00000374466 KIAA1210Q9ULL0 1709 aa16.75■□□□□ 0.27
CSGALNACT2-201ENST00000374466 KIF1BO60333 1816 aa16.74■□□□□ 0.27
CSGALNACT2-201ENST00000374466 UBR1Q8IWV7 1749 aa16.74■□□□□ 0.27
CSGALNACT2-201ENST00000374466 ANKRD30BQ9BXX2 1392 aa16.73■□□□□ 0.27
CSGALNACT2-201ENST00000374466 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT2-201ENST00000374466 UGGT1Q9NYU2 1555 aa16.71■□□□□ 0.27
CSGALNACT2-201ENST00000374466 RRP7BPQ9NSQ0 103 aa16.71■□□□□ 0.27
CSGALNACT2-201ENST00000374466 PPLO60437 1756 aa16.71■□□□□ 0.26
CSGALNACT2-201ENST00000374466 NRXN1Q9ULB1 1477 aa16.7■□□□□ 0.26
CSGALNACT2-201ENST00000374466 SLIT1O75093 1534 aa16.7■□□□□ 0.26
CSGALNACT2-201ENST00000374466 LAMC1P11047 1609 aa16.7■□□□□ 0.26
CSGALNACT2-201ENST00000374466 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
CSGALNACT2-201ENST00000374466 ARHGAP23Q9P227 1491 aa16.68■□□□□ 0.26
CSGALNACT2-201ENST00000374466 PTPRMP28827 1452 aa16.68■□□□□ 0.26
CSGALNACT2-201ENST00000374466 MYOM2P54296 1465 aa16.68■□□□□ 0.26
CSGALNACT2-201ENST00000374466 SPATA31E1Q6ZUB1 1445 aa16.67■□□□□ 0.26
CSGALNACT2-201ENST00000374466 PRAG1Q86YV5 1406 aa16.67■□□□□ 0.26
CSGALNACT2-201ENST00000374466 TIMELESSQ9UNS1 1208 aa16.67■□□□□ 0.26
CSGALNACT2-201ENST00000374466 NUP155O75694 1391 aa16.66■□□□□ 0.26
CSGALNACT2-201ENST00000374466 SETD1BQ9UPS6 1966 aaKnown RBP16.66■□□□□ 0.26
CSGALNACT2-201ENST00000374466 A2ML1A8K2U0 1454 aa16.65■□□□□ 0.26
CSGALNACT2-201ENST00000374466 STAC3Q96MF2 364 aa16.65■□□□□ 0.26
CSGALNACT2-201ENST00000374466 ZMYM3Q14202 1370 aa16.64■□□□□ 0.25
CSGALNACT2-201ENST00000374466 SETD1AO15047 1707 aaKnown RBP16.63■□□□□ 0.25
CSGALNACT2-201ENST00000374466 CEP170BQ9Y4F5 1589 aaPredicted RBP16.63■□□□□ 0.25
CSGALNACT2-201ENST00000374466 DIP2AQ14689 1571 aa16.63■□□□□ 0.25
CSGALNACT2-201ENST00000374466 MPHOSPH9Q99550 1183 aa16.62■□□□□ 0.25
CSGALNACT2-201ENST00000374466 CHIC2Q9UKJ5 165 aa16.62■□□□□ 0.25
CSGALNACT2-201ENST00000374466 KIF3BO15066 747 aa16.62■□□□□ 0.25
CSGALNACT2-201ENST00000374466 UHRF1BP1Q6BDS2 1440 aa16.62■□□□□ 0.25
CSGALNACT2-201ENST00000374466 NEXMIFQ5QGS0 1516 aa16.62■□□□□ 0.25
CSGALNACT2-201ENST00000374466 POLR1AO95602 1720 aaPredicted RBP16.61■□□□□ 0.25
CSGALNACT2-201ENST00000374466 SETBP1Q9Y6X0 1596 aa16.6■□□□□ 0.25
CSGALNACT2-201ENST00000374466 MED14O60244 1454 aa16.58■□□□□ 0.25
CSGALNACT2-201ENST00000374466 MYO5BQ9ULV0 1848 aa16.58■□□□□ 0.24
CSGALNACT2-201ENST00000374466 KNDC1Q76NI1 1749 aa16.57■□□□□ 0.24
CSGALNACT2-201ENST00000374466 SLC52A1Q9NWF4 448 aa16.57■□□□□ 0.24
CSGALNACT2-201ENST00000374466 RPGRIP1LQ68CZ1 1315 aa16.54■□□□□ 0.24
CSGALNACT2-201ENST00000374466 NRXN3Q9Y4C0 1643 aa16.54■□□□□ 0.24
CSGALNACT2-201ENST00000374466 TNRQ92752 1358 aa16.54■□□□□ 0.24
CSGALNACT2-201ENST00000374466 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
CSGALNACT2-201ENST00000374466 TRPM1Q7Z4N2 1603 aa16.52■□□□□ 0.23
CSGALNACT2-201ENST00000374466 NWD1Q149M9 1564 aa16.5■□□□□ 0.23
CSGALNACT2-201ENST00000374466 CCDC144AA2RUR9 1427 aa16.49■□□□□ 0.23
CSGALNACT2-201ENST00000374466 LMTK3Q96Q04 1460 aa16.48■□□□□ 0.23
CSGALNACT2-201ENST00000374466 PCGF6Q9BYE7 350 aa16.47■□□□□ 0.23
CSGALNACT2-201ENST00000374466 KDM4FA0A1W2PPD8 638 aa16.47■□□□□ 0.23
CSGALNACT2-201ENST00000374466 PKD2Q13563 968 aa16.47■□□□□ 0.23
CSGALNACT2-201ENST00000374466 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
CSGALNACT2-201ENST00000374466 ITGAEP38570 1179 aa16.46■□□□□ 0.23
CSGALNACT2-201ENST00000374466 IQGAP1P46940 1657 aa16.46■□□□□ 0.22
CSGALNACT2-201ENST00000374466 STRCQ7RTU9 1775 aa16.45■□□□□ 0.22
CSGALNACT2-201ENST00000374466 DLC1Q96QB1 1528 aa16.44■□□□□ 0.22
CSGALNACT2-201ENST00000374466 PIK3C2GO75747 1445 aa16.44■□□□□ 0.22
CSGALNACT2-201ENST00000374466 GPRASP1Q5JY77 1395 aa16.43■□□□□ 0.22
CSGALNACT2-201ENST00000374466 XRN1Q8IZH2 1706 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms