RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 NISCHQ9Y2I1 1504 aa27.33■■□□□ 1.97
CSGALNACT2-201ENST00000374466 CCDC180Q9P1Z9 1646 aa24.54■■□□□ 1.52
CSGALNACT2-201ENST00000374466 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
CSGALNACT2-201ENST00000374466 DCAF1Q9Y4B6 1507 aa23.11■■□□□ 1.29
CSGALNACT2-201ENST00000374466 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
CSGALNACT2-201ENST00000374466 NACADO15069 1562 aa22.75■■□□□ 1.23
CSGALNACT2-201ENST00000374466 ABCC9O60706 1549 aa22.58■■□□□ 1.21
CSGALNACT2-201ENST00000374466 RB1CC1Q8TDY2 1594 aa22.52■■□□□ 1.2
CSGALNACT2-201ENST00000374466 SHROOM4Q9ULL8 1493 aa22.16■■□□□ 1.14
CSGALNACT2-201ENST00000374466 UNC13AQ9UPW8 1703 aa22.12■■□□□ 1.13
CSGALNACT2-201ENST00000374466 BICRAQ9NZM4 1560 aa21.87■■□□□ 1.09
CSGALNACT2-201ENST00000374466 SCRIBQ14160 1630 aa21.7■■□□□ 1.06
CSGALNACT2-201ENST00000374466 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
CSGALNACT2-201ENST00000374466 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
CSGALNACT2-201ENST00000374466 BAZ1AQ9NRL2 1556 aaPredicted RBP21.18■□□□□ 0.98
CSGALNACT2-201ENST00000374466 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
CSGALNACT2-201ENST00000374466 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
CSGALNACT2-201ENST00000374466 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
CSGALNACT2-201ENST00000374466 SMARCA2P51531 1590 aa20.96■□□□□ 0.95
CSGALNACT2-201ENST00000374466 CECR2Q9BXF3 1484 aa20.91■□□□□ 0.94
CSGALNACT2-201ENST00000374466 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
CSGALNACT2-201ENST00000374466 MROH2BQ7Z745 1585 aa20.88■□□□□ 0.93
CSGALNACT2-201ENST00000374466 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
CSGALNACT2-201ENST00000374466 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
CSGALNACT2-201ENST00000374466 RSF1Q96T23 1441 aaPredicted RBP20.81■□□□□ 0.92
CSGALNACT2-201ENST00000374466 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
CSGALNACT2-201ENST00000374466 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
CSGALNACT2-201ENST00000374466 WIZO95785 1651 aa20.67■□□□□ 0.9
CSGALNACT2-201ENST00000374466 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
CSGALNACT2-201ENST00000374466 PRDM2Q13029 1718 aa20.49■□□□□ 0.87
CSGALNACT2-201ENST00000374466 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
CSGALNACT2-201ENST00000374466 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
CSGALNACT2-201ENST00000374466 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
CSGALNACT2-201ENST00000374466 CFTRP13569 1480 aa20.21■□□□□ 0.83
CSGALNACT2-201ENST00000374466 CADPSQ9ULU8 1353 aa20.05■□□□□ 0.8
CSGALNACT2-201ENST00000374466 BIVM-ERCC5R4GMW8 1640 aa19.89■□□□□ 0.77
CSGALNACT2-201ENST00000374466 THOC2Q8NI27 1593 aaKnown RBP19.89■□□□□ 0.77
CSGALNACT2-201ENST00000374466 KIF21AQ7Z4S6 1674 aa19.88■□□□□ 0.77
CSGALNACT2-201ENST00000374466 PDS5BQ9NTI5 1447 aa19.87■□□□□ 0.77
CSGALNACT2-201ENST00000374466 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
CSGALNACT2-201ENST00000374466 WDR62O43379 1518 aa19.85■□□□□ 0.77
CSGALNACT2-201ENST00000374466 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
CSGALNACT2-201ENST00000374466 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
CSGALNACT2-201ENST00000374466 FANCD2Q9BXW9 1451 aa19.78■□□□□ 0.76
CSGALNACT2-201ENST00000374466 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
CSGALNACT2-201ENST00000374466 NESP48681 1621 aa19.76■□□□□ 0.75
CSGALNACT2-201ENST00000374466 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
CSGALNACT2-201ENST00000374466 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
CSGALNACT2-201ENST00000374466 SUPT5HO00267 1087 aaKnown RBP19.71■□□□□ 0.75
CSGALNACT2-201ENST00000374466 CUX2O14529 1486 aa19.66■□□□□ 0.74
CSGALNACT2-201ENST00000374466 URB2Q14146 1524 aaKnown RBP19.63■□□□□ 0.73
CSGALNACT2-201ENST00000374466 CUX1P39880 1505 aa19.63■□□□□ 0.73
CSGALNACT2-201ENST00000374466 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
CSGALNACT2-201ENST00000374466 SYNJ1O43426 1573 aa19.57■□□□□ 0.72
CSGALNACT2-201ENST00000374466 TARBP1Q13395 1621 aaKnown RBP19.57■□□□□ 0.72
CSGALNACT2-201ENST00000374466 WRNQ14191 1432 aaPredicted RBP eCLIP19.52■□□□□ 0.71
CSGALNACT2-201ENST00000374466 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
CSGALNACT2-201ENST00000374466 IFT140Q96RY7 1462 aa19.46■□□□□ 0.71
CSGALNACT2-201ENST00000374466 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
CSGALNACT2-201ENST00000374466 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
CSGALNACT2-201ENST00000374466 POLA1P09884 1462 aaPredicted RBP19.42■□□□□ 0.7
CSGALNACT2-201ENST00000374466 FGD5Q6ZNL6 1462 aa19.38■□□□□ 0.69
CSGALNACT2-201ENST00000374466 EEA1Q15075 1411 aa19.31■□□□□ 0.68
CSGALNACT2-201ENST00000374466 ERICH3Q5RHP9 1530 aa19.31■□□□□ 0.68
CSGALNACT2-201ENST00000374466 PBRM1Q86U86 1689 aa19.29■□□□□ 0.68
CSGALNACT2-201ENST00000374466 CUL7Q14999 1698 aa19.26■□□□□ 0.67
CSGALNACT2-201ENST00000374466 EIF4G3O43432 1585 aaKnown RBP19.24■□□□□ 0.67
CSGALNACT2-201ENST00000374466 SOGA1O94964 1423 aa19.2■□□□□ 0.66
CSGALNACT2-201ENST00000374466 MAGI1Q96QZ7 1491 aaPredicted RBP19.15■□□□□ 0.66
CSGALNACT2-201ENST00000374466 ADAMTS12P58397 1594 aa19.14■□□□□ 0.66
CSGALNACT2-201ENST00000374466 KIF21BO75037 1637 aa19.14■□□□□ 0.66
CSGALNACT2-201ENST00000374466 CHIC1Q5VXU3 224 aa19.12■□□□□ 0.65
CSGALNACT2-201ENST00000374466 GRIN2BQ13224 1484 aa19.11■□□□□ 0.65
CSGALNACT2-201ENST00000374466 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
CSGALNACT2-201ENST00000374466 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
CSGALNACT2-201ENST00000374466 GAPVD1Q14C86 1478 aa19.07■□□□□ 0.64
CSGALNACT2-201ENST00000374466 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
CSGALNACT2-201ENST00000374466 ZNF608Q9ULD9 1512 aaPredicted RBP19.02■□□□□ 0.64
CSGALNACT2-201ENST00000374466 FHAD1B1AJZ9 1412 aa18.98■□□□□ 0.63
CSGALNACT2-201ENST00000374466 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
CSGALNACT2-201ENST00000374466 IGF1RP08069 1367 aa18.96■□□□□ 0.63
CSGALNACT2-201ENST00000374466 SHROOM2Q13796 1616 aa18.93■□□□□ 0.62
CSGALNACT2-201ENST00000374466 CTTNBP2Q8WZ74 1663 aa18.92■□□□□ 0.62
CSGALNACT2-201ENST00000374466 CLASP1Q7Z460 1538 aa18.91■□□□□ 0.62
CSGALNACT2-201ENST00000374466 CHD1O14646 1710 aa18.91■□□□□ 0.62
CSGALNACT2-201ENST00000374466 NUP160Q12769 1436 aa18.9■□□□□ 0.62
CSGALNACT2-201ENST00000374466 TRIM41Q8WV44 630 aa18.89■□□□□ 0.62
CSGALNACT2-201ENST00000374466 SNAPC4Q5SXM2 1469 aa18.89■□□□□ 0.61
CSGALNACT2-201ENST00000374466 AQRO60306 1485 aaKnown RBP eCLIP18.87■□□□□ 0.61
CSGALNACT2-201ENST00000374466 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
CSGALNACT2-201ENST00000374466 RUSC2Q8N2Y8 1516 aa18.86■□□□□ 0.61
CSGALNACT2-201ENST00000374466 GRIN2AQ12879 1464 aa18.86■□□□□ 0.61
CSGALNACT2-201ENST00000374466 CEP170Q5SW79 1584 aa18.79■□□□□ 0.6
CSGALNACT2-201ENST00000374466 TDRD9Q8NDG6 1382 aaKnown RBP18.79■□□□□ 0.6
CSGALNACT2-201ENST00000374466 UGGT2Q9NYU1 1516 aa18.77■□□□□ 0.59
CSGALNACT2-201ENST00000374466 GOLGA3Q08378 1498 aa18.76■□□□□ 0.59
CSGALNACT2-201ENST00000374466 CARMIL1Q5VZK9 1371 aa18.76■□□□□ 0.59
CSGALNACT2-201ENST00000374466 SAMD9Q5K651 1589 aa18.75■□□□□ 0.59
CSGALNACT2-201ENST00000374466 KIAA0586Q9BVV6 1533 aa18.74■□□□□ 0.59
CSGALNACT2-201ENST00000374466 EFCAB5A4FU69 1503 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 285 ms