RNA–Protein interactions for RNA: ENST00000373899.3

TFAM-202, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 1,121 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-202ENST00000373899 PLEKHH2Q8IVE3 1493 aa21.32■■□□□ 1
TFAM-202ENST00000373899 ADGBQ8N7X0 1667 aa21.31■■□□□ 1
TFAM-202ENST00000373899 TIAM1Q13009 1591 aa21.3■■□□□ 1
TFAM-202ENST00000373899 SOCS7O14512 581 aa21.29■■□□□ 1
TFAM-202ENST00000373899 NCKAP5LQ9HCH0 1330 aa21.28■■□□□ 1
TFAM-202ENST00000373899 MBD5Q9P267 1494 aa21.27■■□□□ 1
TFAM-202ENST00000373899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.27■■□□□ 14e-10■□□□□ 10.3
TFAM-202ENST00000373899 ZNF335Q9H4Z2 1342 aaPredicted RBP21.27■□□□□ 0.99
TFAM-202ENST00000373899 KCNA4P22459 653 aa21.26■□□□□ 0.99
TFAM-202ENST00000373899 VPS8Q8N3P4 1428 aa21.26■□□□□ 0.99
TFAM-202ENST00000373899 CCNB3Q8WWL7 1395 aa21.25■□□□□ 0.99
TFAM-202ENST00000373899 CFDP1Q9UEE9 299 aaPredicted RBP21.25■□□□□ 0.99
TFAM-202ENST00000373899 DNMT1P26358 1616 aaKnown RBP21.23■□□□□ 0.99
TFAM-202ENST00000373899 ZNF644Q9H582 1327 aaPredicted RBP21.22■□□□□ 0.99
TFAM-202ENST00000373899 MTUS2Q5JR59 1369 aa21.22■□□□□ 0.99
TFAM-202ENST00000373899 EHBP1L1Q8N3D4 1523 aa21.21■□□□□ 0.99
TFAM-202ENST00000373899 PKD2Q13563 968 aa21.21■□□□□ 0.99
TFAM-202ENST00000373899 NEURL4Q96JN8 1562 aa21.2■□□□□ 0.98
TFAM-202ENST00000373899 A2ML1A8K2U0 1454 aa21.2■□□□□ 0.98
TFAM-202ENST00000373899 RTEL1-TNFRSF6BF6WH68 1400 aa21.19■□□□□ 0.98
TFAM-202ENST00000373899 GGT6Q6P531 493 aa21.18■□□□□ 0.98
TFAM-202ENST00000373899 POLR1AO95602 1720 aaPredicted RBP21.18■□□□□ 0.98
TFAM-202ENST00000373899 DHX29Q7Z478 1369 aaKnown RBP21.14■□□□□ 0.98
TFAM-202ENST00000373899 KANK4Q5T7N3 995 aaPredicted RBP21.14■□□□□ 0.97
TFAM-202ENST00000373899 FAM135AQ9P2D6 1515 aa21.14■□□□□ 0.97
TFAM-202ENST00000373899 UBAP1LF5GYI3 381 aa21.12■□□□□ 0.97
TFAM-202ENST00000373899 KDM5DQ9BY66 1539 aa21.12■□□□□ 0.97
TFAM-202ENST00000373899 PZPP20742 1482 aa21.12■□□□□ 0.97
TFAM-202ENST00000373899 MAP3K1Q13233 1512 aa21.1■□□□□ 0.97
TFAM-202ENST00000373899 CCDC141Q6ZP82 1450 aa21.1■□□□□ 0.97
TFAM-202ENST00000373899 CAMSAP2Q08AD1 1489 aa21.09■□□□□ 0.97
TFAM-202ENST00000373899 LRRC9Q6ZRR7 1453 aa21.08■□□□□ 0.97
TFAM-202ENST00000373899 TNRQ92752 1358 aa21.08■□□□□ 0.96
TFAM-202ENST00000373899 NCOA2Q15596 1464 aa21.07■□□□□ 0.96
TFAM-202ENST00000373899 VWDEQ8N2E2 1590 aa21.07■□□□□ 0.96
TFAM-202ENST00000373899 RSPH4AQ5TD94 716 aa21.07■□□□□ 0.96
TFAM-202ENST00000373899 FBXO31Q5XUX0 539 aaPredicted RBP21.07■□□□□ 0.96
TFAM-202ENST00000373899 CPS1P31327 1500 aa21.07■□□□□ 0.96
TFAM-202ENST00000373899 ALKQ9UM73 1620 aa21.07■□□□□ 0.96
TFAM-202ENST00000373899 ARHGEF5Q12774 1597 aa21.06■□□□□ 0.96
TFAM-202ENST00000373899 SHANK2Q9UPX8 1470 aa21.04■□□□□ 0.96
TFAM-202ENST00000373899 DEPDC5O75140 1603 aa21.03■□□□□ 0.96
TFAM-202ENST00000373899 MED14O60244 1454 aa21.02■□□□□ 0.96
TFAM-202ENST00000373899 KIF3BO15066 747 aa21.02■□□□□ 0.96
TFAM-202ENST00000373899 RNF17Q9BXT8 1623 aaKnown RBP21.02■□□□□ 0.96
TFAM-202ENST00000373899 MED1Q15648 1581 aaPredicted RBP21.02■□□□□ 0.95
TFAM-202ENST00000373899 NLRP1Q9C000 1473 aa21.01■□□□□ 0.95
TFAM-202ENST00000373899 MIA2Q96PC5 1412 aa21■□□□□ 0.95
TFAM-202ENST00000373899 STRCP1A6NGW2 1772 aa21■□□□□ 0.95
TFAM-202ENST00000373899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.99■□□□□ 0.95
TFAM-202ENST00000373899 UGGT1Q9NYU2 1555 aa20.99■□□□□ 0.95
TFAM-202ENST00000373899 APLP2Q06481 763 aa20.99■□□□□ 0.95
TFAM-202ENST00000373899 MROH1Q8NDA8 1641 aa20.98■□□□□ 0.95
TFAM-202ENST00000373899 HSPA1LP34931 641 aa20.98■□□□□ 0.95
TFAM-202ENST00000373899 MAST1Q9Y2H9 1570 aa20.97■□□□□ 0.95
TFAM-202ENST00000373899 ZC3H13Q5T200 1668 aaKnown RBP20.97■□□□□ 0.95
TFAM-202ENST00000373899 ABCC3O15438 1527 aa20.97■□□□□ 0.95
TFAM-202ENST00000373899 IQGAP1P46940 1657 aa20.96■□□□□ 0.95
TFAM-202ENST00000373899 NPHP4O75161 1426 aaPredicted RBP20.95■□□□□ 0.95
TFAM-202ENST00000373899 WASHC2CQ9Y4E1 1318 aa20.95■□□□□ 0.94
TFAM-202ENST00000373899 EIF2AK4Q9P2K8 1649 aaKnown RBP20.94■□□□□ 0.94
TFAM-202ENST00000373899 ANKLE2Q86XL3 938 aa20.92■□□□□ 0.94
TFAM-202ENST00000373899 ERVK-7P63135 1459 aa20.91■□□□□ 0.94
TFAM-202ENST00000373899 TOM1O60784 492 aa20.9■□□□□ 0.94
TFAM-202ENST00000373899 PIP4K2BP78356 416 aa20.9■□□□□ 0.94
TFAM-202ENST00000373899 THEMISQ8N1K5 641 aaPredicted RBP20.9■□□□□ 0.94
TFAM-202ENST00000373899 CEP152O94986 1710 aa20.9■□□□□ 0.94
TFAM-202ENST00000373899 UBR1Q8IWV7 1749 aa20.9■□□□□ 0.94
TFAM-202ENST00000373899 SYNMO15061 1565 aa20.89■□□□□ 0.94
TFAM-202ENST00000373899 LRRC7Q96NW7 1537 aa20.89■□□□□ 0.94
TFAM-202ENST00000373899 TSPY4P0CV99 314 aa20.89■□□□□ 0.93
TFAM-202ENST00000373899 TSPY10P0CW01 314 aa20.89■□□□□ 0.93
TFAM-202ENST00000373899 U3KPZ7 1027 aaPredicted RBP20.89■□□□□ 0.93
TFAM-202ENST00000373899 MYOM3Q5VTT5 1437 aa20.87■□□□□ 0.93
TFAM-202ENST00000373899 XIRP1Q702N8 1843 aaKnown RBP20.83■□□□□ 0.93
TFAM-202ENST00000373899 ARHGAP23Q9P227 1491 aa20.82■□□□□ 0.92
TFAM-202ENST00000373899 CFAP65Q6ZU64 1925 aaKnown RBP20.82■□□□□ 0.92
TFAM-202ENST00000373899 SLIT1O75093 1534 aa20.81■□□□□ 0.92
TFAM-202ENST00000373899 PRDM15P57071 1507 aaPredicted RBP20.81■□□□□ 0.92
TFAM-202ENST00000373899 DUOX2Q9NRD8 1548 aa20.79■□□□□ 0.92
TFAM-202ENST00000373899 SCAF11Q99590 1463 aaKnown RBP20.79■□□□□ 0.92
TFAM-202ENST00000373899 CROCC2H7BZ55 1655 aa20.79■□□□□ 0.92
TFAM-202ENST00000373899 ARHGAP31Q2M1Z3 1444 aa20.77■□□□□ 0.91
TFAM-202ENST00000373899 FGD6Q6ZV73 1430 aa20.75■□□□□ 0.91
TFAM-202ENST00000373899 LTKP29376 864 aa20.74■□□□□ 0.91
TFAM-202ENST00000373899 PIK3C2BO00750 1634 aa20.74■□□□□ 0.91
TFAM-202ENST00000373899 SLC4A2P04920 1241 aa20.72■□□□□ 0.91
TFAM-202ENST00000373899 ERBINQ96RT1 1412 aa20.71■□□□□ 0.91
TFAM-202ENST00000373899 PPARGC1BQ86YN6 1023 aaKnown RBP20.71■□□□□ 0.91
TFAM-202ENST00000373899 KDM5AP29375 1690 aaKnown RBP20.7■□□□□ 0.91
TFAM-202ENST00000373899 ABCC5O15440 1437 aa20.7■□□□□ 0.9
TFAM-202ENST00000373899 KIF15Q9NS87 1388 aa20.7■□□□□ 0.9
TFAM-202ENST00000373899 PTPN23Q9H3S7 1636 aa20.68■□□□□ 0.9
TFAM-202ENST00000373899 LMTK2Q8IWU2 1503 aa20.67■□□□□ 0.9
TFAM-202ENST00000373899 TET3O43151 1660 aa20.65■□□□□ 0.9
TFAM-202ENST00000373899 TMEM2Q9UHN6 1383 aa20.65■□□□□ 0.9
TFAM-202ENST00000373899 RGS17Q9UGC6 210 aaPredicted RBP20.65■□□□□ 0.9
TFAM-202ENST00000373899 TXNDC2Q86VQ3 553 aa20.64■□□□□ 0.89
TFAM-202ENST00000373899 DAPK1P53355 1430 aa20.63■□□□□ 0.89
TFAM-202ENST00000373899 EFCAB6Q5THR3 1501 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms