RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 KDM5DQ9BY66 1539 aa25.54■■□□□ 1.68
HDAC8-202ENST00000373556 PLA2R1Q13018 1463 aa25.53■■□□□ 1.68
HDAC8-202ENST00000373556 FBXO31Q5XUX0 539 aaPredicted RBP25.51■■□□□ 1.67
HDAC8-202ENST00000373556 A2ML1A8K2U0 1454 aa25.5■■□□□ 1.67
HDAC8-202ENST00000373556 DNMT1P26358 1616 aaKnown RBP25.5■■□□□ 1.67
HDAC8-202ENST00000373556 TCOF1Q13428 1488 aaKnown RBP25.5■■□□□ 1.67
HDAC8-202ENST00000373556 MYOM3Q5VTT5 1437 aa25.5■■□□□ 1.67
HDAC8-202ENST00000373556 WASHC2CQ9Y4E1 1318 aa25.5■■□□□ 1.67
HDAC8-202ENST00000373556 MAST1Q9Y2H9 1570 aa25.49■■□□□ 1.67
HDAC8-202ENST00000373556 FAM135AQ9P2D6 1515 aa25.49■■□□□ 1.67
HDAC8-202ENST00000373556 PZPP20742 1482 aa25.48■■□□□ 1.67
HDAC8-202ENST00000373556 TNRQ92752 1358 aa25.47■■□□□ 1.67
HDAC8-202ENST00000373556 PKD2Q13563 968 aa25.47■■□□□ 1.67
HDAC8-202ENST00000373556 ZNF335Q9H4Z2 1342 aaPredicted RBP25.46■■□□□ 1.67
HDAC8-202ENST00000373556 MIA2Q96PC5 1412 aa25.46■■□□□ 1.67
HDAC8-202ENST00000373556 RNF17Q9BXT8 1623 aaKnown RBP25.44■■□□□ 1.66
HDAC8-202ENST00000373556 IQSEC2Q5JU85 1478 aa25.41■■□□□ 1.66
HDAC8-202ENST00000373556 POLR1AO95602 1720 aaPredicted RBP25.4■■□□□ 1.66
HDAC8-202ENST00000373556 EIF2AK4Q9P2K8 1649 aaKnown RBP25.4■■□□□ 1.66
HDAC8-202ENST00000373556 ABCC3O15438 1527 aa25.38■■□□□ 1.65
HDAC8-202ENST00000373556 ZC3H13Q5T200 1668 aaKnown RBP25.38■■□□□ 1.65
HDAC8-202ENST00000373556 APLP2Q06481 763 aa25.37■■□□□ 1.65
HDAC8-202ENST00000373556 MROH1Q8NDA8 1641 aa25.37■■□□□ 1.65
HDAC8-202ENST00000373556 CROCC2H7BZ55 1655 aa25.36■■□□□ 1.65
HDAC8-202ENST00000373556 NEURL4Q96JN8 1562 aa25.36■■□□□ 1.65
HDAC8-202ENST00000373556 PTPN23Q9H3S7 1636 aa25.36■■□□□ 1.65
HDAC8-202ENST00000373556 CEP152O94986 1710 aa25.34■■□□□ 1.65
HDAC8-202ENST00000373556 DUOX2Q9NRD8 1548 aa25.34■■□□□ 1.65
HDAC8-202ENST00000373556 NLRP1Q9C000 1473 aa25.34■■□□□ 1.65
HDAC8-202ENST00000373556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.33■■□□□ 1.65
HDAC8-202ENST00000373556 UGGT1Q9NYU2 1555 aa25.33■■□□□ 1.65
HDAC8-202ENST00000373556 ABCC5O15440 1437 aa25.31■■□□□ 1.64
HDAC8-202ENST00000373556 CFAP65Q6ZU64 1925 aaKnown RBP25.3■■□□□ 1.64
HDAC8-202ENST00000373556 SHANK2Q9UPX8 1470 aa25.3■■□□□ 1.64
HDAC8-202ENST00000373556 SPATA31D1Q6ZQQ2 1576 aa25.3■■□□□ 1.64
HDAC8-202ENST00000373556 KIF15Q9NS87 1388 aa25.3■■□□□ 1.64
HDAC8-202ENST00000373556 THEMISQ8N1K5 641 aaPredicted RBP25.29■■□□□ 1.64
HDAC8-202ENST00000373556 ERVK-7P63135 1459 aa25.28■■□□□ 1.64
HDAC8-202ENST00000373556 FGD6Q6ZV73 1430 aa25.28■■□□□ 1.64
HDAC8-202ENST00000373556 UBAP1LF5GYI3 381 aa25.27■■□□□ 1.64
HDAC8-202ENST00000373556 ANKLE2Q86XL3 938 aa25.27■■□□□ 1.64
HDAC8-202ENST00000373556 RRP7BPQ9NSQ0 103 aa25.27■■□□□ 1.64
HDAC8-202ENST00000373556 DAPK1P53355 1430 aa25.27■■□□□ 1.64
HDAC8-202ENST00000373556 PRDM15P57071 1507 aaPredicted RBP25.24■■□□□ 1.63
HDAC8-202ENST00000373556 ERBINQ96RT1 1412 aa25.24■■□□□ 1.63
HDAC8-202ENST00000373556 DISP3Q9P2K9 1392 aa25.24■■□□□ 1.63
HDAC8-202ENST00000373556 DEPDC5O75140 1603 aa25.23■■□□□ 1.63
HDAC8-202ENST00000373556 NPHP4O75161 1426 aaPredicted RBP25.22■■□□□ 1.63
HDAC8-202ENST00000373556 CHIC2Q9UKJ5 165 aa25.21■■□□□ 1.63
HDAC8-202ENST00000373556 MED14O60244 1454 aa25.21■■□□□ 1.63
HDAC8-202ENST00000373556 VWDEQ8N2E2 1590 aa25.2■■□□□ 1.62
HDAC8-202ENST00000373556 IQGAP1P46940 1657 aa25.2■■□□□ 1.62
HDAC8-202ENST00000373556 CPS1P31327 1500 aa25.19■■□□□ 1.62
HDAC8-202ENST00000373556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.19■■□□□ 1.62
HDAC8-202ENST00000373556 UBR1Q8IWV7 1749 aa25.19■■□□□ 1.62
HDAC8-202ENST00000373556 ARHGAP31Q2M1Z3 1444 aa25.15■■□□□ 1.62
HDAC8-202ENST00000373556 ANKRD30AQ9BXX3 1397 aa25.15■■□□□ 1.62
HDAC8-202ENST00000373556 KANK1Q14678 1352 aa25.11■■□□□ 1.61
HDAC8-202ENST00000373556 ILDR2Q71H61 639 aa25.11■■□□□ 1.61
HDAC8-202ENST00000373556 SCAF1Q9H7N4 1312 aaKnown RBP25.11■■□□□ 1.61
HDAC8-202ENST00000373556 STRCP1A6NGW2 1772 aa25.1■■□□□ 1.61
HDAC8-202ENST00000373556 PIP4K2BP78356 416 aa25.09■■□□□ 1.61
HDAC8-202ENST00000373556 FAM50AQ14320 339 aaKnown RBP25.09■■□□□ 1.61
HDAC8-202ENST00000373556 PIK3C2BO00750 1634 aa25.08■■□□□ 1.61
HDAC8-202ENST00000373556 SCAF11Q99590 1463 aaKnown RBP25.07■■□□□ 1.6
HDAC8-202ENST00000373556 LMTK2Q8IWU2 1503 aa25.07■■□□□ 1.6
HDAC8-202ENST00000373556 ADGRL2O95490 1459 aa25.06■■□□□ 1.6
HDAC8-202ENST00000373556 ARHGAP23Q9P227 1491 aa25.06■■□□□ 1.6
HDAC8-202ENST00000373556 SLIT1O75093 1534 aa25.06■■□□□ 1.6
HDAC8-202ENST00000373556 TOM1O60784 492 aa25.05■■□□□ 1.6
HDAC8-202ENST00000373556 LTKP29376 864 aa25.05■■□□□ 1.6
HDAC8-202ENST00000373556 TXNDC2Q86VQ3 553 aa25.03■■□□□ 1.6
HDAC8-202ENST00000373556 LRRC7Q96NW7 1537 aa25.02■■□□□ 1.6
HDAC8-202ENST00000373556 SYNMO15061 1565 aa25.01■■□□□ 1.59
HDAC8-202ENST00000373556 ALKQ9UM73 1620 aa25.01■■□□□ 1.59
HDAC8-202ENST00000373556 HSPA1LP34931 641 aa25.01■■□□□ 1.59
HDAC8-202ENST00000373556 EFCAB6Q5THR3 1501 aa25.01■■□□□ 1.59
HDAC8-202ENST00000373556 STAG3Q9UJ98 1225 aa25■■□□□ 1.59
HDAC8-202ENST00000373556 EID1Q9Y6B2 187 aa24.98■■□□□ 1.59
HDAC8-202ENST00000373556 ANKRD50Q9ULJ7 1429 aa24.97■■□□□ 1.59
HDAC8-202ENST00000373556 TMEM2Q9UHN6 1383 aa24.97■■□□□ 1.59
HDAC8-202ENST00000373556 IDI1Q13907 227 aa24.97■■□□□ 1.59
HDAC8-202ENST00000373556 KDM5AP29375 1690 aaKnown RBP24.97■■□□□ 1.59
HDAC8-202ENST00000373556 NOS1P29475 1434 aa24.95■■□□□ 1.59
HDAC8-202ENST00000373556 ADGRB3O60242 1522 aa24.91■■□□□ 1.58
HDAC8-202ENST00000373556 XIRP1Q702N8 1843 aaKnown RBP24.91■■□□□ 1.58
HDAC8-202ENST00000373556 SOCS7O14512 581 aa24.9■■□□□ 1.58
HDAC8-202ENST00000373556 TET3O43151 1660 aa24.89■■□□□ 1.58
HDAC8-202ENST00000373556 SENP3Q9H4L4 574 aaPredicted RBP24.89■■□□□ 1.58
HDAC8-202ENST00000373556 RPRD2Q5VT52 1461 aaKnown RBP24.87■■□□□ 1.57
HDAC8-202ENST00000373556 UNC13BO14795 1591 aa24.87■■□□□ 1.57
HDAC8-202ENST00000373556 MED1Q15648 1581 aaPredicted RBP24.87■■□□□ 1.57
HDAC8-202ENST00000373556 GCC2Q8IWJ2 1684 aa24.86■■□□□ 1.57
HDAC8-202ENST00000373556 MYO5BQ9ULV0 1848 aa24.86■■□□□ 1.57
HDAC8-202ENST00000373556 PPARGC1BQ86YN6 1023 aaKnown RBP24.85■■□□□ 1.57
HDAC8-202ENST00000373556 SLC52A1Q9NWF4 448 aa24.85■■□□□ 1.57
HDAC8-202ENST00000373556 SLC26A8Q96RN1 970 aa24.84■■□□□ 1.57
HDAC8-202ENST00000373556 ITGAEP38570 1179 aa24.81■■□□□ 1.56
HDAC8-202ENST00000373556 ROCK1Q13464 1354 aa24.8■■□□□ 1.56
HDAC8-202ENST00000373556 E9PCH4 1651 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms