RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 PTPRKQ15262 1439 aa32.8■■■□□ 2.84
TMEM54-202ENST00000373463 CHIC2Q9UKJ5 165 aa32.8■■■□□ 2.84
TMEM54-202ENST00000373463 PPP6R1Q9UPN7 881 aa32.8■■■□□ 2.84
TMEM54-202ENST00000373463 ADGRL2O95490 1459 aa32.8■■■□□ 2.84
TMEM54-202ENST00000373463 RRP7BPQ9NSQ0 103 aa32.79■■■□□ 2.84
TMEM54-202ENST00000373463 NCOA1Q15788 1441 aa32.78■■■□□ 2.84
TMEM54-202ENST00000373463 KDM5DQ9BY66 1539 aa32.77■■■□□ 2.84
TMEM54-202ENST00000373463 FAM135AQ9P2D6 1515 aa32.76■■■□□ 2.83
TMEM54-202ENST00000373463 SETD1BQ9UPS6 1966 aaKnown RBP32.76■■■□□ 2.83
TMEM54-202ENST00000373463 ANKRD30AQ9BXX3 1397 aa32.74■■■□□ 2.83
TMEM54-202ENST00000373463 ERBINQ96RT1 1412 aa32.74■■■□□ 2.83
TMEM54-202ENST00000373463 NPATQ14207 1427 aa32.71■■■□□ 2.83
TMEM54-202ENST00000373463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.7■■■□□ 2.83
TMEM54-202ENST00000373463 HSPA2P54652 639 aa32.7■■■□□ 2.83
TMEM54-202ENST00000373463 RRBP1Q9P2E9 1410 aaKnown RBP32.68■■■□□ 2.82
TMEM54-202ENST00000373463 ABCC3O15438 1527 aa32.68■■■□□ 2.82
TMEM54-202ENST00000373463 DEPDC5O75140 1603 aa32.68■■■□□ 2.82
TMEM54-202ENST00000373463 PRDM15P57071 1507 aaPredicted RBP32.67■■■□□ 2.82
TMEM54-202ENST00000373463 UHRF1BP1Q6BDS2 1440 aa32.66■■■□□ 2.82
TMEM54-202ENST00000373463 ZC3H13Q5T200 1668 aaKnown RBP32.66■■■□□ 2.82
TMEM54-202ENST00000373463 WASHC2CQ9Y4E1 1318 aa32.65■■■□□ 2.82
TMEM54-202ENST00000373463 CEP152O94986 1710 aa32.65■■■□□ 2.82
TMEM54-202ENST00000373463 PZPP20742 1482 aa32.62■■■□□ 2.81
TMEM54-202ENST00000373463 MYO3AQ8NEV4 1616 aa32.6■■■□□ 2.81
TMEM54-202ENST00000373463 FBXO31Q5XUX0 539 aaPredicted RBP32.58■■■□□ 2.81
TMEM54-202ENST00000373463 CAMSAP1Q5T5Y3 1602 aa32.58■■■□□ 2.81
TMEM54-202ENST00000373463 ROCK1Q13464 1354 aa32.58■■■□□ 2.81
TMEM54-202ENST00000373463 ANKRD50Q9ULJ7 1429 aa32.56■■■□□ 2.8
TMEM54-202ENST00000373463 VWDEQ8N2E2 1590 aa32.56■■■□□ 2.8
TMEM54-202ENST00000373463 ITGAEP38570 1179 aa32.55■■■□□ 2.8
TMEM54-202ENST00000373463 ZNF142P52746 1687 aaPredicted RBP32.55■■■□□ 2.8
TMEM54-202ENST00000373463 STRCQ7RTU9 1775 aa32.52■■■□□ 2.8
TMEM54-202ENST00000373463 CEP170BQ9Y4F5 1589 aaPredicted RBP32.5■■■□□ 2.79
TMEM54-202ENST00000373463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.49■■■□□ 2.79
TMEM54-202ENST00000373463 TNRQ92752 1358 aa32.48■■■□□ 2.79
TMEM54-202ENST00000373463 SPATA31D1Q6ZQQ2 1576 aa32.48■■■□□ 2.79
TMEM54-202ENST00000373463 LMTK2Q8IWU2 1503 aa32.46■■■□□ 2.79
TMEM54-202ENST00000373463 ERVK-7P63135 1459 aa32.45■■■□□ 2.79
TMEM54-202ENST00000373463 UNC13BO14795 1591 aa32.45■■■□□ 2.78
TMEM54-202ENST00000373463 ARHGAP31Q2M1Z3 1444 aa32.44■■■□□ 2.78
TMEM54-202ENST00000373463 CFAP65Q6ZU64 1925 aaKnown RBP32.43■■■□□ 2.78
TMEM54-202ENST00000373463 A2ML1A8K2U0 1454 aa32.42■■■□□ 2.78
TMEM54-202ENST00000373463 KANK1Q14678 1352 aa32.42■■■□□ 2.78
TMEM54-202ENST00000373463 EFCAB6Q5THR3 1501 aa32.37■■■□□ 2.77
TMEM54-202ENST00000373463 NLRP1Q9C000 1473 aa32.35■■■□□ 2.77
TMEM54-202ENST00000373463 GCC2Q8IWJ2 1684 aa32.33■■■□□ 2.77
TMEM54-202ENST00000373463 NAIPQ13075 1403 aa32.32■■■□□ 2.76
TMEM54-202ENST00000373463 TET3O43151 1660 aa32.31■■■□□ 2.76
TMEM54-202ENST00000373463 PLA2R1Q13018 1463 aa32.31■■■□□ 2.76
TMEM54-202ENST00000373463 IQGAP3Q86VI3 1631 aa32.3■■■□□ 2.76
TMEM54-202ENST00000373463 SYNMO15061 1565 aa32.27■■■□□ 2.76
TMEM54-202ENST00000373463 UGGT1Q9NYU2 1555 aa32.27■■■□□ 2.76
TMEM54-202ENST00000373463 NOS1P29475 1434 aa32.25■■■□□ 2.75
TMEM54-202ENST00000373463 HFM1A2PYH4 1435 aa32.24■■■□□ 2.75
TMEM54-202ENST00000373463 PTPRTO14522 1441 aa32.24■■■□□ 2.75
TMEM54-202ENST00000373463 NCKAP5LQ9HCH0 1330 aa32.24■■■□□ 2.75
TMEM54-202ENST00000373463 UBR1Q8IWV7 1749 aa32.23■■■□□ 2.75
TMEM54-202ENST00000373463 E9PCH4 1651 aa32.22■■■□□ 2.75
TMEM54-202ENST00000373463 RPRD2Q5VT52 1461 aaKnown RBP32.21■■■□□ 2.75
TMEM54-202ENST00000373463 NUP155O75694 1391 aa32.2■■■□□ 2.75
TMEM54-202ENST00000373463 PIK3C2BO00750 1634 aa32.19■■■□□ 2.74
TMEM54-202ENST00000373463 NEURL4Q96JN8 1562 aa32.19■■■□□ 2.74
TMEM54-202ENST00000373463 POLR1AO95602 1720 aaPredicted RBP32.18■■■□□ 2.74
TMEM54-202ENST00000373463 DMRT2Q9Y5R5 561 aa32.18■■■□□ 2.74
TMEM54-202ENST00000373463 PKD2Q13563 968 aa32.14■■■□□ 2.74
TMEM54-202ENST00000373463 THEMISQ8N1K5 641 aaPredicted RBP32.14■■■□□ 2.74
TMEM54-202ENST00000373463 IDI1Q13907 227 aa32.12■■■□□ 2.73
TMEM54-202ENST00000373463 KDM5AP29375 1690 aaKnown RBP32.09■■■□□ 2.73
TMEM54-202ENST00000373463 ARHGAP23Q9P227 1491 aa32.08■■■□□ 2.73
TMEM54-202ENST00000373463 SLIT1O75093 1534 aa32.05■■■□□ 2.72
TMEM54-202ENST00000373463 ADGRB3O60242 1522 aa32.05■■■□□ 2.72
TMEM54-202ENST00000373463 LTBP4Q8N2S1 1624 aa32.04■■■□□ 2.72
TMEM54-202ENST00000373463 MED14O60244 1454 aa32.03■■■□□ 2.72
TMEM54-202ENST00000373463 ANKLE2Q86XL3 938 aa32.03■■■□□ 2.72
TMEM54-202ENST00000373463 SLC52A1Q9NWF4 448 aa32.01■■■□□ 2.71
TMEM54-202ENST00000373463 MYO5BQ9ULV0 1848 aa32■■■□□ 2.71
TMEM54-202ENST00000373463 SPHKAPQ2M3C7 1700 aa31.99■■■□□ 2.71
TMEM54-202ENST00000373463 LTKP29376 864 aa31.98■■■□□ 2.71
TMEM54-202ENST00000373463 NPHP4O75161 1426 aaPredicted RBP31.98■■■□□ 2.71
TMEM54-202ENST00000373463 TMEM131LA2VDJ0 1609 aa31.97■■■□□ 2.71
TMEM54-202ENST00000373463 TMEM2Q9UHN6 1383 aa31.97■■■□□ 2.71
TMEM54-202ENST00000373463 IQGAP1P46940 1657 aa31.97■■■□□ 2.71
TMEM54-202ENST00000373463 SCAF11Q99590 1463 aaKnown RBP31.97■■■□□ 2.71
TMEM54-202ENST00000373463 ZNF335Q9H4Z2 1342 aaPredicted RBP31.95■■■□□ 2.7
TMEM54-202ENST00000373463 CERKQ8TCT0 537 aa31.93■■■□□ 2.7
TMEM54-202ENST00000373463 TRIM52Q96A61 297 aa31.93■■■□□ 2.7
TMEM54-202ENST00000373463 STAG3Q9UJ98 1225 aa31.92■■■□□ 2.7
TMEM54-202ENST00000373463 TXNDC2Q86VQ3 553 aa31.9■■■□□ 2.7
TMEM54-202ENST00000373463 ILDR1Q86SU0 546 aaPredicted RBP31.89■■■□□ 2.7
TMEM54-202ENST00000373463 SETD5Q9C0A6 1442 aa31.89■■■□□ 2.7
TMEM54-202ENST00000373463 ZFYVE9O95405 1425 aa31.87■■■□□ 2.69
TMEM54-202ENST00000373463 TRPM2O94759 1503 aa31.86■■■□□ 2.69
TMEM54-202ENST00000373463 CLTCL1P53675 1640 aa31.86■■■□□ 2.69
TMEM54-202ENST00000373463 SLC4A1APQ9BWU0 796 aaKnown RBP31.83■■■□□ 2.69
TMEM54-202ENST00000373463 EID1Q9Y6B2 187 aa31.82■■■□□ 2.68
TMEM54-202ENST00000373463 STRCP1A6NGW2 1772 aa31.81■■■□□ 2.68
TMEM54-202ENST00000373463 RAB3GAP2Q9H2M9 1393 aa31.81■■■□□ 2.68
TMEM54-202ENST00000373463 RIMS2Q9UQ26 1411 aa31.8■■■□□ 2.68
TMEM54-202ENST00000373463 FBXO41Q8TF61 875 aa31.79■■■□□ 2.68
TMEM54-202ENST00000373463 CHGAP10645 457 aaKnown RBP31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms