RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 ZNF326Q5BKZ1 582 aaKnown RBP17.24■□□□□ 0.35
TSPAN6-201ENST00000373020 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
TSPAN6-201ENST00000373020 ERICH6BQ5W0A0 696 aa17.23■□□□□ 0.35
TSPAN6-201ENST00000373020 LAMC1P11047 1609 aa17.23■□□□□ 0.35
TSPAN6-201ENST00000373020 PLA2R1Q13018 1463 aa17.23■□□□□ 0.35
TSPAN6-201ENST00000373020 UHRF1BP1LA0JNW5 1464 aa17.22■□□□□ 0.35
TSPAN6-201ENST00000373020 ZCCHC11Q5TAX3 1644 aaKnown RBP17.22■□□□□ 0.35
TSPAN6-201ENST00000373020 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
TSPAN6-201ENST00000373020 DUOX2Q9NRD8 1548 aa17.22■□□□□ 0.35
TSPAN6-201ENST00000373020 PRAG1Q86YV5 1406 aa17.22■□□□□ 0.35
TSPAN6-201ENST00000373020 CARD11Q9BXL7 1154 aa17.21■□□□□ 0.35
TSPAN6-201ENST00000373020 CCDC144AA2RUR9 1427 aa17.21■□□□□ 0.35
TSPAN6-201ENST00000373020 ATP10AO60312 1499 aa17.2■□□□□ 0.34
TSPAN6-201ENST00000373020 ERBINQ96RT1 1412 aa17.2■□□□□ 0.34
TSPAN6-201ENST00000373020 ABCC1P33527 1531 aa17.19■□□□□ 0.34
TSPAN6-201ENST00000373020 GPRASP1Q5JY77 1395 aa17.18■□□□□ 0.34
TSPAN6-201ENST00000373020 PLCH2O75038 1416 aa17.18■□□□□ 0.34
TSPAN6-201ENST00000373020 A2MP01023 1474 aa17.18■□□□□ 0.34
TSPAN6-201ENST00000373020 DCAF11Q8TEB1 546 aa17.17■□□□□ 0.34
TSPAN6-201ENST00000373020 KTN1Q86UP2 1357 aaKnown RBP17.16■□□□□ 0.34
TSPAN6-201ENST00000373020 EIF2AK4Q9P2K8 1649 aaKnown RBP17.16■□□□□ 0.34
TSPAN6-201ENST00000373020 PRDM15P57071 1507 aaPredicted RBP17.16■□□□□ 0.34
TSPAN6-201ENST00000373020 ARAP3Q8WWN8 1544 aa17.15■□□□□ 0.34
TSPAN6-201ENST00000373020 ST20-MTHFSA0A0A6YYL1 179 aa17.15■□□□□ 0.34
TSPAN6-201ENST00000373020 SMG6Q86US8 1419 aaKnown RBP17.15■□□□□ 0.34
TSPAN6-201ENST00000373020 KDM2AQ9Y2K7 1162 aa17.13■□□□□ 0.33
TSPAN6-201ENST00000373020 RNF17Q9BXT8 1623 aaKnown RBP17.13■□□□□ 0.33
TSPAN6-201ENST00000373020 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
TSPAN6-201ENST00000373020 COL17A1Q9UMD9 1497 aaPredicted RBP17.11■□□□□ 0.33
TSPAN6-201ENST00000373020 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
TSPAN6-201ENST00000373020 LRPPRCP42704 1394 aaKnown RBP17.1■□□□□ 0.33
TSPAN6-201ENST00000373020 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
TSPAN6-201ENST00000373020 PPP4R2Q9NY27 417 aa17.09■□□□□ 0.33
TSPAN6-201ENST00000373020 RBM19Q9Y4C8 960 aaKnown RBP17.09■□□□□ 0.33
TSPAN6-201ENST00000373020 PNISRQ8TF01 805 aaKnown RBP17.09■□□□□ 0.33
TSPAN6-201ENST00000373020 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.33
TSPAN6-201ENST00000373020 TRAPPC8Q9Y2L5 1435 aa17.08■□□□□ 0.32
TSPAN6-201ENST00000373020 DEPDC5O75140 1603 aa17.07■□□□□ 0.32
TSPAN6-201ENST00000373020 EFCAB2Q5VUJ9 269 aa17.07■□□□□ 0.32
TSPAN6-201ENST00000373020 RTEL1-TNFRSF6BF6WH68 1400 aa17.07■□□□□ 0.32
TSPAN6-201ENST00000373020 MYBBP1AQ9BQG0 1328 aaKnown RBP17.07■□□□□ 0.32
TSPAN6-201ENST00000373020 RALBP1Q15311 655 aa17.06■□□□□ 0.32
TSPAN6-201ENST00000373020 RNF123Q5XPI4 1314 aa17.06■□□□□ 0.32
TSPAN6-201ENST00000373020 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
TSPAN6-201ENST00000373020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.04■□□□□ 0.32
TSPAN6-201ENST00000373020 NUDCQ9Y266 331 aa17.04■□□□□ 0.32
TSPAN6-201ENST00000373020 TRPM2O94759 1503 aa17.04■□□□□ 0.32
TSPAN6-201ENST00000373020 ABCA9Q8IUA7 1624 aa17.04■□□□□ 0.32
TSPAN6-201ENST00000373020 MADDQ8WXG6 1647 aa17.03■□□□□ 0.32
TSPAN6-201ENST00000373020 NBPF1Q3BBV0 1214 aa17.03■□□□□ 0.32
TSPAN6-201ENST00000373020 INO80Q9ULG1 1556 aaPredicted RBP17.03■□□□□ 0.32
TSPAN6-201ENST00000373020 CEP152O94986 1710 aa17.02■□□□□ 0.32
TSPAN6-201ENST00000373020 TMC1Q8TDI8 760 aa17.02■□□□□ 0.32
TSPAN6-201ENST00000373020 TESK2Q96S53 571 aa17.02■□□□□ 0.32
TSPAN6-201ENST00000373020 SPHKAPQ2M3C7 1700 aa17.02■□□□□ 0.31
TSPAN6-201ENST00000373020 RGL3Q3MIN7 710 aa17.01■□□□□ 0.31
TSPAN6-201ENST00000373020 IQGAP1P46940 1657 aa17.01■□□□□ 0.31
TSPAN6-201ENST00000373020 VWDEQ8N2E2 1590 aa17.01■□□□□ 0.31
TSPAN6-201ENST00000373020 TET3O43151 1660 aa17■□□□□ 0.31
TSPAN6-201ENST00000373020 DISP3Q9P2K9 1392 aa17■□□□□ 0.31
TSPAN6-201ENST00000373020 PTPRTO14522 1441 aa17■□□□□ 0.31
TSPAN6-201ENST00000373020 WDR7Q9Y4E6 1490 aa16.99■□□□□ 0.31
TSPAN6-201ENST00000373020 ZMYM4Q5VZL5 1548 aa16.99■□□□□ 0.31
TSPAN6-201ENST00000373020 PER1O15534 1290 aaPredicted RBP16.98■□□□□ 0.31
TSPAN6-201ENST00000373020 ANP32EQ9BTT0 268 aa16.98■□□□□ 0.31
TSPAN6-201ENST00000373020 CNGB1Q14028 1251 aaPredicted RBP16.98■□□□□ 0.31
TSPAN6-201ENST00000373020 WASHC2CQ9Y4E1 1318 aa16.98■□□□□ 0.31
TSPAN6-201ENST00000373020 ATP7AQ04656 1500 aa16.97■□□□□ 0.31
TSPAN6-201ENST00000373020 NEURL4Q96JN8 1562 aa16.97■□□□□ 0.31
TSPAN6-201ENST00000373020 CLTCL1P53675 1640 aa16.97■□□□□ 0.31
TSPAN6-201ENST00000373020 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
TSPAN6-201ENST00000373020 SPAG9O60271 1321 aaKnown RBP16.97■□□□□ 0.31
TSPAN6-201ENST00000373020 INSRP06213 1382 aa16.96■□□□□ 0.31
TSPAN6-201ENST00000373020 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
TSPAN6-201ENST00000373020 MROH1Q8NDA8 1641 aa16.93■□□□□ 0.3
TSPAN6-201ENST00000373020 FANCAO15360 1455 aa16.93■□□□□ 0.3
TSPAN6-201ENST00000373020 SCAPERQ9BY12 1400 aa16.93■□□□□ 0.3
TSPAN6-201ENST00000373020 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
TSPAN6-201ENST00000373020 KIAA1210Q9ULL0 1709 aa16.92■□□□□ 0.3
TSPAN6-201ENST00000373020 STAC3Q96MF2 364 aa16.91■□□□□ 0.3
TSPAN6-201ENST00000373020 TMF1P82094 1093 aa16.9■□□□□ 0.3
TSPAN6-201ENST00000373020 AFAP1Q8N556 730 aa16.9■□□□□ 0.3
TSPAN6-201ENST00000373020 BLMP54132 1417 aaPredicted RBP16.9■□□□□ 0.3
TSPAN6-201ENST00000373020 SYNMO15061 1565 aa16.89■□□□□ 0.3
TSPAN6-201ENST00000373020 SCAF11Q99590 1463 aaKnown RBP16.89■□□□□ 0.29
TSPAN6-201ENST00000373020 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
TSPAN6-201ENST00000373020 MYOM1P52179 1685 aa16.86■□□□□ 0.29
TSPAN6-201ENST00000373020 KANK1Q14678 1352 aa16.86■□□□□ 0.29
TSPAN6-201ENST00000373020 PANK3Q9H999 370 aa16.86■□□□□ 0.29
TSPAN6-201ENST00000373020 EFCAB6Q5THR3 1501 aa16.85■□□□□ 0.29
TSPAN6-201ENST00000373020 IFT172Q9UG01 1749 aa16.85■□□□□ 0.29
TSPAN6-201ENST00000373020 MYOM2P54296 1465 aa16.85■□□□□ 0.29
TSPAN6-201ENST00000373020 KIDINS220Q9ULH0 1771 aa16.85■□□□□ 0.29
TSPAN6-201ENST00000373020 PDE3BQ13370 1112 aa16.85■□□□□ 0.29
TSPAN6-201ENST00000373020 MAP3K4Q9Y6R4 1608 aa16.84■□□□□ 0.29
TSPAN6-201ENST00000373020 MSH5O43196 834 aa16.84■□□□□ 0.29
TSPAN6-201ENST00000373020 LMTK2Q8IWU2 1503 aa16.84■□□□□ 0.29
TSPAN6-201ENST00000373020 ASXL2Q76L83 1435 aa16.83■□□□□ 0.29
TSPAN6-201ENST00000373020 ABCA6Q8N139 1617 aa16.82■□□□□ 0.28
TSPAN6-201ENST00000373020 PPRC1Q5VV67 1664 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms