RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 RNF17Q9BXT8 1623 aaKnown RBP35.24■■■■□ 3.23
COL9A2-201ENST00000372736 KDM5DQ9BY66 1539 aa35.22■■■■□ 3.23
COL9A2-201ENST00000372736 DUOX2Q9NRD8 1548 aa35.21■■■■□ 3.23
COL9A2-201ENST00000372736 PTPRKQ15262 1439 aa35.17■■■■□ 3.22
COL9A2-201ENST00000372736 KIF15Q9NS87 1388 aa35.15■■■■□ 3.22
COL9A2-201ENST00000372736 MROH1Q8NDA8 1641 aa35.14■■■■□ 3.22
COL9A2-201ENST00000372736 MYO3AQ8NEV4 1616 aa35.11■■■■□ 3.21
COL9A2-201ENST00000372736 ERBINQ96RT1 1412 aa35.09■■■■□ 3.21
COL9A2-201ENST00000372736 ZC3H13Q5T200 1668 aaKnown RBP35.09■■■■□ 3.21
COL9A2-201ENST00000372736 ZNF142P52746 1687 aaPredicted RBP35.08■■■■□ 3.21
COL9A2-201ENST00000372736 FAM50AQ14320 339 aaKnown RBP35.07■■■■□ 3.2
COL9A2-201ENST00000372736 PZPP20742 1482 aa35.07■■■■□ 3.2
COL9A2-201ENST00000372736 ABCC3O15438 1527 aa35.06■■■■□ 3.2
COL9A2-201ENST00000372736 STRCQ7RTU9 1775 aa35.06■■■■□ 3.2
COL9A2-201ENST00000372736 ADGRL2O95490 1459 aa35.06■■■■□ 3.2
COL9A2-201ENST00000372736 RRP7BPQ9NSQ0 103 aa35.06■■■■□ 3.2
COL9A2-201ENST00000372736 WASHC2CQ9Y4E1 1318 aa35.06■■■■□ 3.2
COL9A2-201ENST00000372736 ANKRD30AQ9BXX3 1397 aa35.04■■■■□ 3.2
COL9A2-201ENST00000372736 PRDM15P57071 1507 aaPredicted RBP35.03■■■■□ 3.2
COL9A2-201ENST00000372736 NCOA1Q15788 1441 aa35.03■■■■□ 3.2
COL9A2-201ENST00000372736 CHIC2Q9UKJ5 165 aa35.02■■■■□ 3.2
COL9A2-201ENST00000372736 CEP170BQ9Y4F5 1589 aaPredicted RBP35.01■■■■□ 3.2
COL9A2-201ENST00000372736 PPARGC1BQ86YN6 1023 aaKnown RBP35.01■■■■□ 3.2
COL9A2-201ENST00000372736 DEPDC5O75140 1603 aa35.01■■■■□ 3.19
COL9A2-201ENST00000372736 CEP152O94986 1710 aa35.01■■■■□ 3.19
COL9A2-201ENST00000372736 CAMSAP1Q5T5Y3 1602 aa34.95■■■■□ 3.19
COL9A2-201ENST00000372736 FBXO31Q5XUX0 539 aaPredicted RBP34.93■■■■□ 3.18
COL9A2-201ENST00000372736 TNRQ92752 1358 aa34.92■■■■□ 3.18
COL9A2-201ENST00000372736 A2ML1A8K2U0 1454 aa34.9■■■■□ 3.18
COL9A2-201ENST00000372736 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.87■■■■□ 3.17
COL9A2-201ENST00000372736 SPATA31D1Q6ZQQ2 1576 aa34.87■■■■□ 3.17
COL9A2-201ENST00000372736 VWDEQ8N2E2 1590 aa34.86■■■■□ 3.17
COL9A2-201ENST00000372736 ERVK-7P63135 1459 aa34.84■■■■□ 3.17
COL9A2-201ENST00000372736 PLA2R1Q13018 1463 aa34.84■■■■□ 3.17
COL9A2-201ENST00000372736 ANKRD50Q9ULJ7 1429 aa34.82■■■■□ 3.17
COL9A2-201ENST00000372736 PTPRTO14522 1441 aa34.81■■■■□ 3.16
COL9A2-201ENST00000372736 NLRP1Q9C000 1473 aa34.81■■■■□ 3.16
COL9A2-201ENST00000372736 ARHGAP31Q2M1Z3 1444 aa34.81■■■■□ 3.16
COL9A2-201ENST00000372736 ROCK1Q13464 1354 aa34.8■■■■□ 3.16
COL9A2-201ENST00000372736 DMRT2Q9Y5R5 561 aa34.8■■■■□ 3.16
COL9A2-201ENST00000372736 LMTK2Q8IWU2 1503 aa34.8■■■■□ 3.16
COL9A2-201ENST00000372736 RRBP1Q9P2E9 1410 aaKnown RBP34.8■■■■□ 3.16
COL9A2-201ENST00000372736 KANK1Q14678 1352 aa34.78■■■■□ 3.16
COL9A2-201ENST00000372736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.78■■■■□ 3.16
COL9A2-201ENST00000372736 CFAP65Q6ZU64 1925 aaKnown RBP34.77■■■■□ 3.16
COL9A2-201ENST00000372736 UNC13BO14795 1591 aa34.71■■■■□ 3.15
COL9A2-201ENST00000372736 UGGT1Q9NYU2 1555 aa34.71■■■■□ 3.15
COL9A2-201ENST00000372736 EFCAB6Q5THR3 1501 aa34.71■■■■□ 3.15
COL9A2-201ENST00000372736 NCKAP5LQ9HCH0 1330 aa34.7■■■■□ 3.15
COL9A2-201ENST00000372736 ILDR1Q86SU0 546 aaPredicted RBP34.69■■■■□ 3.14
COL9A2-201ENST00000372736 POLR1AO95602 1720 aaPredicted RBP34.69■■■■□ 3.14
COL9A2-201ENST00000372736 ITGAEP38570 1179 aa34.68■■■■□ 3.14
COL9A2-201ENST00000372736 PKD2Q13563 968 aa34.67■■■■□ 3.14
COL9A2-201ENST00000372736 NEURL4Q96JN8 1562 aa34.64■■■■□ 3.14
COL9A2-201ENST00000372736 UBR1Q8IWV7 1749 aa34.62■■■■□ 3.13
COL9A2-201ENST00000372736 TET3O43151 1660 aa34.62■■■■□ 3.13
COL9A2-201ENST00000372736 SYNMO15061 1565 aa34.58■■■■□ 3.13
COL9A2-201ENST00000372736 THEMISQ8N1K5 641 aaPredicted RBP34.58■■■■□ 3.13
COL9A2-201ENST00000372736 GCC2Q8IWJ2 1684 aa34.57■■■■□ 3.13
COL9A2-201ENST00000372736 LTBP4Q8N2S1 1624 aa34.57■■■■□ 3.12
COL9A2-201ENST00000372736 IQGAP3Q86VI3 1631 aa34.56■■■■□ 3.12
COL9A2-201ENST00000372736 CERKQ8TCT0 537 aa34.56■■■■□ 3.12
COL9A2-201ENST00000372736 NOS1P29475 1434 aa34.55■■■■□ 3.12
COL9A2-201ENST00000372736 PIK3C2BO00750 1634 aa34.55■■■■□ 3.12
COL9A2-201ENST00000372736 RPRD2Q5VT52 1461 aaKnown RBP34.55■■■■□ 3.12
COL9A2-201ENST00000372736 FBXO41Q8TF61 875 aa34.53■■■■□ 3.12
COL9A2-201ENST00000372736 KDM5AP29375 1690 aaKnown RBP34.49■■■■□ 3.11
COL9A2-201ENST00000372736 E9PCH4 1651 aa34.48■■■■□ 3.11
COL9A2-201ENST00000372736 MED14O60244 1454 aa34.48■■■■□ 3.11
COL9A2-201ENST00000372736 ANKLE2Q86XL3 938 aa34.48■■■■□ 3.11
COL9A2-201ENST00000372736 ARHGAP23Q9P227 1491 aa34.46■■■■□ 3.11
COL9A2-201ENST00000372736 SLIT1O75093 1534 aa34.45■■■■□ 3.11
COL9A2-201ENST00000372736 IQGAP1P46940 1657 aa34.44■■■■□ 3.1
COL9A2-201ENST00000372736 ZNF335Q9H4Z2 1342 aaPredicted RBP34.44■■■■□ 3.1
COL9A2-201ENST00000372736 NAIPQ13075 1403 aa34.44■■■■□ 3.1
COL9A2-201ENST00000372736 NPHP4O75161 1426 aaPredicted RBP34.43■■■■□ 3.1
COL9A2-201ENST00000372736 NUP155O75694 1391 aa34.42■■■■□ 3.1
COL9A2-201ENST00000372736 ADGRB3O60242 1522 aa34.41■■■■□ 3.1
COL9A2-201ENST00000372736 IDI1Q13907 227 aa34.4■■■■□ 3.1
COL9A2-201ENST00000372736 SCAF11Q99590 1463 aaKnown RBP34.39■■■■□ 3.1
COL9A2-201ENST00000372736 HFM1A2PYH4 1435 aa34.38■■■■□ 3.09
COL9A2-201ENST00000372736 IQSEC2Q5JU85 1478 aa34.35■■■■□ 3.09
COL9A2-201ENST00000372736 TMEM2Q9UHN6 1383 aa34.35■■■■□ 3.09
COL9A2-201ENST00000372736 SLC52A1Q9NWF4 448 aa34.34■■■■□ 3.09
COL9A2-201ENST00000372736 LTKP29376 864 aa34.31■■■■□ 3.08
COL9A2-201ENST00000372736 STAG3Q9UJ98 1225 aa34.31■■■■□ 3.08
COL9A2-201ENST00000372736 MYO5BQ9ULV0 1848 aa34.3■■■■□ 3.08
COL9A2-201ENST00000372736 TMEM131LA2VDJ0 1609 aa34.27■■■■□ 3.08
COL9A2-201ENST00000372736 TXNDC2Q86VQ3 553 aa34.26■■■■□ 3.08
COL9A2-201ENST00000372736 CPS1P31327 1500 aa34.25■■■■□ 3.07
COL9A2-201ENST00000372736 SPHKAPQ2M3C7 1700 aa34.24■■■■□ 3.07
COL9A2-201ENST00000372736 EID1Q9Y6B2 187 aa34.23■■■■□ 3.07
COL9A2-201ENST00000372736 STRCP1A6NGW2 1772 aa34.21■■■■□ 3.07
COL9A2-201ENST00000372736 ZFYVE9O95405 1425 aa34.18■■■■□ 3.06
COL9A2-201ENST00000372736 RIMS2Q9UQ26 1411 aa34.12■■■■□ 3.05
COL9A2-201ENST00000372736 TRPM2O94759 1503 aa34.1■■■■□ 3.05
COL9A2-201ENST00000372736 CLTCL1P53675 1640 aa34.08■■■■□ 3.05
COL9A2-201ENST00000372736 TRIM52Q96A61 297 aa34.07■■■■□ 3.04
COL9A2-201ENST00000372736 CHGAP10645 457 aaKnown RBP34.06■■■■□ 3.04
COL9A2-201ENST00000372736 LRRC7Q96NW7 1537 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms