RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 ADGBQ8N7X0 1667 aa13.05□□□□□ -0.32
MRPL55-211ENST00000366738 SENP3Q9H4L4 574 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-211ENST00000366738 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
MRPL55-211ENST00000366738 PLEKHH2Q8IVE3 1493 aa13.04□□□□□ -0.32
MRPL55-211ENST00000366738 TNRQ92752 1358 aa13.03□□□□□ -0.32
MRPL55-211ENST00000366738 FBXO31Q5XUX0 539 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-211ENST00000366738 CFDP1Q9UEE9 299 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-211ENST00000366738 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
MRPL55-211ENST00000366738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.01□□□□□ -0.33
MRPL55-211ENST00000366738 TIAM1Q13009 1591 aa13.01□□□□□ -0.33
MRPL55-211ENST00000366738 MTUS2Q5JR59 1369 aa13□□□□□ -0.33
MRPL55-211ENST00000366738 CCNB3Q8WWL7 1395 aa13□□□□□ -0.33
MRPL55-211ENST00000366738 PZPP20742 1482 aa12.99□□□□□ -0.33
MRPL55-211ENST00000366738 STRCP1A6NGW2 1772 aa12.99□□□□□ -0.33
MRPL55-211ENST00000366738 KDM5DQ9BY66 1539 aa12.98□□□□□ -0.33
MRPL55-211ENST00000366738 NPHP4O75161 1426 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-211ENST00000366738 ANKLE2Q86XL3 938 aa12.98□□□□□ -0.33
MRPL55-211ENST00000366738 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
MRPL55-211ENST00000366738 MBD5Q9P267 1494 aa12.97□□□□□ -0.33
MRPL55-211ENST00000366738 IQGAP1P46940 1657 aa12.97□□□□□ -0.33
MRPL55-211ENST00000366738 RNF17Q9BXT8 1623 aaKnown RBP12.97□□□□□ -0.33
MRPL55-211ENST00000366738 DEPDC5O75140 1603 aa12.96□□□□□ -0.33
MRPL55-211ENST00000366738 UGGT1Q9NYU2 1555 aa12.96□□□□□ -0.33
MRPL55-211ENST00000366738 LRRC7Q96NW7 1537 aa12.96□□□□□ -0.33
MRPL55-211ENST00000366738 MED14O60244 1454 aa12.96□□□□□ -0.34
MRPL55-211ENST00000366738 DHX29Q7Z478 1369 aaKnown RBP12.95□□□□□ -0.34
MRPL55-211ENST00000366738 FAM135AQ9P2D6 1515 aa12.94□□□□□ -0.34
MRPL55-211ENST00000366738 NLRP1Q9C000 1473 aa12.94□□□□□ -0.34
MRPL55-211ENST00000366738 KIF3BO15066 747 aa12.94□□□□□ -0.34
MRPL55-211ENST00000366738 RGS17Q9UGC6 210 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-211ENST00000366738 VPS8Q8N3P4 1428 aa12.94□□□□□ -0.34
MRPL55-211ENST00000366738 MIA2Q96PC5 1412 aa12.94□□□□□ -0.34
MRPL55-211ENST00000366738 SYNMO15061 1565 aa12.94□□□□□ -0.34
MRPL55-211ENST00000366738 THEMISQ8N1K5 641 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-211ENST00000366738 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
MRPL55-211ENST00000366738 NCOA2Q15596 1464 aa12.92□□□□□ -0.34
MRPL55-211ENST00000366738 WASHC2CQ9Y4E1 1318 aa12.91□□□□□ -0.34
MRPL55-211ENST00000366738 ZC3H13Q5T200 1668 aaKnown RBP12.9□□□□□ -0.34
MRPL55-211ENST00000366738 CCDC141Q6ZP82 1450 aa12.9□□□□□ -0.34
MRPL55-211ENST00000366738 CAMSAP2Q08AD1 1489 aa12.89□□□□□ -0.35
MRPL55-211ENST00000366738 XIRP1Q702N8 1843 aaKnown RBP12.87□□□□□ -0.35
MRPL55-211ENST00000366738 ABCC3O15438 1527 aa12.87□□□□□ -0.35
MRPL55-211ENST00000366738 ERVK-7P63135 1459 aa12.85□□□□□ -0.35
MRPL55-211ENST00000366738 LRRC9Q6ZRR7 1453 aa12.85□□□□□ -0.35
MRPL55-211ENST00000366738 SETD1AO15047 1707 aaKnown RBP12.85□□□□□ -0.35
MRPL55-211ENST00000366738 KANK4Q5T7N3 995 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-211ENST00000366738 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
MRPL55-211ENST00000366738 UBR1Q8IWV7 1749 aa12.85□□□□□ -0.35
MRPL55-211ENST00000366738 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
MRPL55-211ENST00000366738 ARHGEF5Q12774 1597 aa12.83□□□□□ -0.36
MRPL55-211ENST00000366738 CEP152O94986 1710 aa12.82□□□□□ -0.36
MRPL55-211ENST00000366738 CFAP65Q6ZU64 1925 aaKnown RBP12.82□□□□□ -0.36
MRPL55-211ENST00000366738 MROH1Q8NDA8 1641 aa12.81□□□□□ -0.36
MRPL55-211ENST00000366738 LTKP29376 864 aa12.81□□□□□ -0.36
MRPL55-211ENST00000366738 ARHGAP23Q9P227 1491 aa12.79□□□□□ -0.36
MRPL55-211ENST00000366738 ROBO1Q9Y6N7 1651 aa12.79□□□□□ -0.36
MRPL55-211ENST00000366738 FAM135BQ49AJ0 1406 aa12.79□□□□□ -0.36
MRPL55-211ENST00000366738 SLIT1O75093 1534 aa12.78□□□□□ -0.36
MRPL55-211ENST00000366738 MAP3K1Q13233 1512 aa12.78□□□□□ -0.36
MRPL55-211ENST00000366738 MAST1Q9Y2H9 1570 aa12.78□□□□□ -0.36
MRPL55-211ENST00000366738 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
MRPL55-211ENST00000366738 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.36
MRPL55-211ENST00000366738 TXNDC2Q86VQ3 553 aa12.77□□□□□ -0.37
MRPL55-211ENST00000366738 TMEM94Q12767 1356 aa12.77□□□□□ -0.37
MRPL55-211ENST00000366738 TSPY4P0CV99 314 aa12.76□□□□□ -0.37
MRPL55-211ENST00000366738 TSPY10P0CW01 314 aa12.76□□□□□ -0.37
MRPL55-211ENST00000366738 MYOM3Q5VTT5 1437 aa12.76□□□□□ -0.37
MRPL55-211ENST00000366738 PIK3C2BO00750 1634 aa12.75□□□□□ -0.37
MRPL55-211ENST00000366738 RBM33Q96EV2 1170 aaKnown RBP12.74□□□□□ -0.37
MRPL55-211ENST00000366738 EID1Q9Y6B2 187 aa12.72□□□□□ -0.37
MRPL55-211ENST00000366738 PHLPP1O60346 1717 aa12.71□□□□□ -0.37
MRPL55-211ENST00000366738 TMEM2Q9UHN6 1383 aa12.71□□□□□ -0.37
MRPL55-211ENST00000366738 PRDM15P57071 1507 aaPredicted RBP12.71□□□□□ -0.38
MRPL55-211ENST00000366738 ABCC5O15440 1437 aa12.71□□□□□ -0.38
MRPL55-211ENST00000366738 CROCC2H7BZ55 1655 aa12.7□□□□□ -0.38
MRPL55-211ENST00000366738 PROSER2Q86WR7 435 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-211ENST00000366738 SLC26A8Q96RN1 970 aa12.69□□□□□ -0.38
MRPL55-211ENST00000366738 ARHGAP31Q2M1Z3 1444 aa12.69□□□□□ -0.38
MRPL55-211ENST00000366738 PTPN23Q9H3S7 1636 aa12.69□□□□□ -0.38
MRPL55-211ENST00000366738 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
MRPL55-211ENST00000366738 EFCAB6Q5THR3 1501 aa12.68□□□□□ -0.38
MRPL55-211ENST00000366738 DUOX2Q9NRD8 1548 aa12.68□□□□□ -0.38
MRPL55-211ENST00000366738 KCNA6P17658 529 aa12.68□□□□□ -0.38
MRPL55-211ENST00000366738 PPARGC1BQ86YN6 1023 aaKnown RBP12.68□□□□□ -0.38
MRPL55-211ENST00000366738 LRP6O75581 1613 aa12.68□□□□□ -0.38
MRPL55-211ENST00000366738 JCADQ9P266 1359 aa12.68□□□□□ -0.38
MRPL55-211ENST00000366738 TET3O43151 1660 aa12.67□□□□□ -0.38
MRPL55-211ENST00000366738 NKTRP30414 1462 aaKnown RBP12.67□□□□□ -0.38
MRPL55-211ENST00000366738 COL16A1Q07092 1604 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-211ENST00000366738 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
MRPL55-211ENST00000366738 SRCAPQ6ZRS2 3230 aa12.67□□□□□ -0.38
MRPL55-211ENST00000366738 APLP2Q06481 763 aa12.66□□□□□ -0.38
MRPL55-211ENST00000366738 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
MRPL55-211ENST00000366738 MSH6P52701 1360 aa12.66□□□□□ -0.38
MRPL55-211ENST00000366738 KIF15Q9NS87 1388 aa12.66□□□□□ -0.38
MRPL55-211ENST00000366738 DAPK1P53355 1430 aa12.65□□□□□ -0.38
MRPL55-211ENST00000366738 FGD6Q6ZV73 1430 aa12.65□□□□□ -0.38
MRPL55-211ENST00000366738 TRIM52Q96A61 297 aa12.65□□□□□ -0.38
MRPL55-211ENST00000366738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
MRPL55-211ENST00000366738 RRP7BPQ9NSQ0 103 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms