RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 ROCK2O75116 1388 aaKnown RBP26.11■■□□□ 1.77
TRIM58-201ENST00000366481 CC2D1BQ5T0F9 858 aaKnown RBP26.11■■□□□ 1.77
TRIM58-201ENST00000366481 DAXXQ9UER7 740 aaPredicted RBP26.08■■□□□ 1.77
TRIM58-201ENST00000366481 MBD5Q9P267 1494 aa26.08■■□□□ 1.77
TRIM58-201ENST00000366481 MAGI1Q96QZ7 1491 aaPredicted RBP26.07■■□□□ 1.76
TRIM58-201ENST00000366481 PDE4AP27815 886 aa26.03■■□□□ 1.76
TRIM58-201ENST00000366481 BRPF3Q9ULD4 1205 aa26.03■■□□□ 1.76
TRIM58-201ENST00000366481 PPM1GO15355 546 aaPredicted RBP26.02■■□□□ 1.76
TRIM58-201ENST00000366481 EXOC6Q8TAG9 804 aa26.01■■□□□ 1.75
TRIM58-201ENST00000366481 ADGRL2O95490 1459 aa26.01■■□□□ 1.75
TRIM58-201ENST00000366481 PTPRGP23470 1445 aa26.01■■□□□ 1.75
TRIM58-201ENST00000366481 SMG6Q86US8 1419 aaKnown RBP26.01■■□□□ 1.75
TRIM58-201ENST00000366481 CDCA7LQ96GN5 454 aa25.99■■□□□ 1.75
TRIM58-201ENST00000366481 ITSN2Q9NZM3 1697 aa25.97■■□□□ 1.75
TRIM58-201ENST00000366481 KDM5CP41229 1560 aa25.97■■□□□ 1.75
TRIM58-201ENST00000366481 TCERG1O14776 1098 aaKnown RBP25.96■■□□□ 1.75
TRIM58-201ENST00000366481 USP35Q9P2H5 1018 aa25.96■■□□□ 1.75
TRIM58-201ENST00000366481 ABCC10Q5T3U5 1492 aa25.96■■□□□ 1.75
TRIM58-201ENST00000366481 MYBBP1AQ9BQG0 1328 aaKnown RBP25.96■■□□□ 1.75
TRIM58-201ENST00000366481 NUP160Q12769 1436 aa25.95■■□□□ 1.75
TRIM58-201ENST00000366481 PLIN1O60240 522 aa25.95■■□□□ 1.74
TRIM58-201ENST00000366481 SLC4A3P48751 1232 aa25.94■■□□□ 1.74
TRIM58-201ENST00000366481 RALGAPBQ86X10 1494 aa25.93■■□□□ 1.74
TRIM58-201ENST00000366481 SKAP1Q86WV1 359 aa25.93■■□□□ 1.74
TRIM58-201ENST00000366481 ADGBQ8N7X0 1667 aa25.93■■□□□ 1.74
TRIM58-201ENST00000366481 CCDC144AA2RUR9 1427 aa25.92■■□□□ 1.74
TRIM58-201ENST00000366481 CDC42BPAQ5VT25 1732 aa25.91■■□□□ 1.74
TRIM58-201ENST00000366481 PANK3Q9H999 370 aa25.91■■□□□ 1.74
TRIM58-201ENST00000366481 UHRF1BP1Q6BDS2 1440 aa25.89■■□□□ 1.73
TRIM58-201ENST00000366481 RALBP1Q15311 655 aa25.88■■□□□ 1.73
TRIM58-201ENST00000366481 ARID4BQ4LE39 1312 aaPredicted RBP25.88■■□□□ 1.73
TRIM58-201ENST00000366481 GSE1Q14687 1217 aa25.88■■□□□ 1.73
TRIM58-201ENST00000366481 RRP1P56182 461 aaKnown RBP25.87■■□□□ 1.73
TRIM58-201ENST00000366481 RCAN3Q9UKA8 241 aa25.86■■□□□ 1.73
TRIM58-201ENST00000366481 BACH2Q9BYV9 841 aa25.86■■□□□ 1.73
TRIM58-201ENST00000366481 CROCC2H7BZ55 1655 aa25.85■■□□□ 1.73
TRIM58-201ENST00000366481 NLRP13Q86W25 1043 aa25.85■■□□□ 1.73
TRIM58-201ENST00000366481 DISP3Q9P2K9 1392 aa25.85■■□□□ 1.73
TRIM58-201ENST00000366481 ABCA8O94911 1581 aa25.85■■□□□ 1.73
TRIM58-201ENST00000366481 KTN1Q86UP2 1357 aaKnown RBP25.85■■□□□ 1.73
TRIM58-201ENST00000366481 DDRGK1Q96HY6 314 aa25.82■■□□□ 1.72
TRIM58-201ENST00000366481 FAM135AQ9P2D6 1515 aa25.82■■□□□ 1.72
TRIM58-201ENST00000366481 BRD4O60885 1362 aaPredicted RBP25.82■■□□□ 1.72
TRIM58-201ENST00000366481 PLEKHH2Q8IVE3 1493 aa25.82■■□□□ 1.72
TRIM58-201ENST00000366481 PER1O15534 1290 aaPredicted RBP25.81■■□□□ 1.72
TRIM58-201ENST00000366481 RNF123Q5XPI4 1314 aa25.81■■□□□ 1.72
TRIM58-201ENST00000366481 ADCY10Q96PN6 1610 aa25.81■■□□□ 1.72
TRIM58-201ENST00000366481 CCDC141Q6ZP82 1450 aa25.81■■□□□ 1.72
TRIM58-201ENST00000366481 POLR1AO95602 1720 aaPredicted RBP25.8■■□□□ 1.72
TRIM58-201ENST00000366481 SENP3Q9H4L4 574 aaPredicted RBP25.79■■□□□ 1.72
TRIM58-201ENST00000366481 SYCP2Q9BX26 1530 aa25.79■■□□□ 1.72
TRIM58-201ENST00000366481 NFKBIBQ15653 356 aa25.78■■□□□ 1.72
TRIM58-201ENST00000366481 TESK2Q96S53 571 aa25.78■■□□□ 1.72
TRIM58-201ENST00000366481 PRAG1Q86YV5 1406 aa25.78■■□□□ 1.72
TRIM58-201ENST00000366481 ARHGAP5Q13017 1502 aa25.78■■□□□ 1.72
TRIM58-201ENST00000366481 LRPPRCP42704 1394 aaKnown RBP25.78■■□□□ 1.72
TRIM58-201ENST00000366481 PLA2R1Q13018 1463 aa25.77■■□□□ 1.72
TRIM58-201ENST00000366481 SHANK2Q9UPX8 1470 aa25.77■■□□□ 1.72
TRIM58-201ENST00000366481 FRAT1Q92837 279 aaPredicted RBP25.77■■□□□ 1.72
TRIM58-201ENST00000366481 SAMD9LQ8IVG5 1584 aa25.76■■□□□ 1.71
TRIM58-201ENST00000366481 AFAP1Q8N556 730 aa25.74■■□□□ 1.71
TRIM58-201ENST00000366481 WASHC2CQ9Y4E1 1318 aa25.74■■□□□ 1.71
TRIM58-201ENST00000366481 ARHGEF12Q9NZN5 1544 aa25.73■■□□□ 1.71
TRIM58-201ENST00000366481 A2MP01023 1474 aa25.72■■□□□ 1.71
TRIM58-201ENST00000366481 MS4A1P11836 297 aa25.72■■□□□ 1.71
TRIM58-201ENST00000366481 TMF1P82094 1093 aa25.71■■□□□ 1.71
TRIM58-201ENST00000366481 UBE2Q2Q8WVN8 375 aa25.71■■□□□ 1.71
TRIM58-201ENST00000366481 ADAMTS8Q9UP79 889 aa25.71■■□□□ 1.71
TRIM58-201ENST00000366481 PARD3Q8TEW0 1356 aa25.69■■□□□ 1.7
TRIM58-201ENST00000366481 KDM5DQ9BY66 1539 aa25.69■■□□□ 1.7
TRIM58-201ENST00000366481 RSPH4AQ5TD94 716 aa25.68■■□□□ 1.7
TRIM58-201ENST00000366481 C20orf194Q5TEA3 1177 aa25.68■■□□□ 1.7
TRIM58-201ENST00000366481 CRBNQ96SW2 442 aa25.67■■□□□ 1.7
TRIM58-201ENST00000366481 ERCC6L2Q5T890 1561 aa25.65■■□□□ 1.7
TRIM58-201ENST00000366481 CCDC146Q8IYE0 955 aa25.65■■□□□ 1.7
TRIM58-201ENST00000366481 TTC37Q6PGP7 1564 aa25.64■■□□□ 1.7
TRIM58-201ENST00000366481 CDC42BPBQ9Y5S2 1711 aa25.64■■□□□ 1.7
TRIM58-201ENST00000366481 ERBINQ96RT1 1412 aa25.64■■□□□ 1.69
TRIM58-201ENST00000366481 ARXQ96QS3 562 aa25.63■■□□□ 1.69
TRIM58-201ENST00000366481 KNSTRNQ9Y448 316 aa25.63■■□□□ 1.69
TRIM58-201ENST00000366481 RGS3P49796 1198 aa25.6■■□□□ 1.69
TRIM58-201ENST00000366481 FRAT2O75474 233 aaPredicted RBP25.59■■□□□ 1.69
TRIM58-201ENST00000366481 EFCAB2Q5VUJ9 269 aa25.59■■□□□ 1.69
TRIM58-201ENST00000366481 ARHGEF5Q12774 1597 aa25.59■■□□□ 1.69
TRIM58-201ENST00000366481 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.59■■□□□ 1.694e-9■■■■■ 38.8
TRIM58-201ENST00000366481 WDR43Q15061 677 aaKnown RBP eCLIP25.58■■□□□ 1.69
TRIM58-201ENST00000366481 TRAPPC8Q9Y2L5 1435 aa25.56■■□□□ 1.68
TRIM58-201ENST00000366481 COL17A1Q9UMD9 1497 aaPredicted RBP25.55■■□□□ 1.68
TRIM58-201ENST00000366481 SPAG9O60271 1321 aaKnown RBP25.55■■□□□ 1.68
TRIM58-201ENST00000366481 PPP2R1AP30153 589 aa25.55■■□□□ 1.68
TRIM58-201ENST00000366481 TRPM1Q7Z4N2 1603 aa25.54■■□□□ 1.68
TRIM58-201ENST00000366481 PDE3BQ13370 1112 aa25.53■■□□□ 1.68
TRIM58-201ENST00000366481 PREX2Q70Z35 1606 aa25.53■■□□□ 1.68
TRIM58-201ENST00000366481 CHGAP10645 457 aaKnown RBP25.53■■□□□ 1.68
TRIM58-201ENST00000366481 KIF3BO15066 747 aa25.52■■□□□ 1.68
TRIM58-201ENST00000366481 GPRASP1Q5JY77 1395 aa25.52■■□□□ 1.68
TRIM58-201ENST00000366481 TNNT2P45379 298 aaPredicted RBP25.52■■□□□ 1.68
TRIM58-201ENST00000366481 CFAP70Q5T0N1 1121 aa25.5■■□□□ 1.67
TRIM58-201ENST00000366481 PLEKHH1Q9ULM0 1364 aa25.48■■□□□ 1.67
TRIM58-201ENST00000366481 MAGI2Q86UL8 1455 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms