RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 TNRQ92752 1358 aa25.72■■□□□ 1.71
IFT20-202ENST00000357896 ANKLE2Q86XL3 938 aa25.71■■□□□ 1.71
IFT20-202ENST00000357896 MED1Q15648 1581 aaPredicted RBP25.7■■□□□ 1.71
IFT20-202ENST00000357896 ZNF644Q9H582 1327 aaPredicted RBP25.7■■□□□ 1.71
IFT20-202ENST00000357896 MBD5Q9P267 1494 aa25.69■■□□□ 1.7
IFT20-202ENST00000357896 FBXO31Q5XUX0 539 aaPredicted RBP25.69■■□□□ 1.7
IFT20-202ENST00000357896 THEMISQ8N1K5 641 aaPredicted RBP25.69■■□□□ 1.7
IFT20-202ENST00000357896 KIF3BO15066 747 aa25.67■■□□□ 1.7
IFT20-202ENST00000357896 POLR1AO95602 1720 aaPredicted RBP25.67■■□□□ 1.7
IFT20-202ENST00000357896 WASHC2CQ9Y4E1 1318 aa25.66■■□□□ 1.7
IFT20-202ENST00000357896 PZPP20742 1482 aa25.66■■□□□ 1.7
IFT20-202ENST00000357896 NEURL4Q96JN8 1562 aa25.65■■□□□ 1.7
IFT20-202ENST00000357896 FAM135AQ9P2D6 1515 aa25.65■■□□□ 1.7
IFT20-202ENST00000357896 PHF23Q9BUL5 403 aaPredicted RBP25.64■■□□□ 1.7
IFT20-202ENST00000357896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.63■■□□□ 1.69
IFT20-202ENST00000357896 RSPH4AQ5TD94 716 aa25.62■■□□□ 1.69
IFT20-202ENST00000357896 KDM5DQ9BY66 1539 aa25.62■■□□□ 1.69
IFT20-202ENST00000357896 MIA2Q96PC5 1412 aa25.61■■□□□ 1.69
IFT20-202ENST00000357896 TIAM1Q13009 1591 aa25.61■■□□□ 1.69
IFT20-202ENST00000357896 NLRP1Q9C000 1473 aa25.6■■□□□ 1.69
IFT20-202ENST00000357896 VWDEQ8N2E2 1590 aa25.58■■□□□ 1.69
IFT20-202ENST00000357896 NPHP4O75161 1426 aaPredicted RBP25.58■■□□□ 1.69
IFT20-202ENST00000357896 MED14O60244 1454 aa25.58■■□□□ 1.69
IFT20-202ENST00000357896 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
IFT20-202ENST00000357896 CEP162Q5TB80 1403 aa25.56■■□□□ 1.68
IFT20-202ENST00000357896 UGGT1Q9NYU2 1555 aa25.56■■□□□ 1.68
IFT20-202ENST00000357896 CCDC141Q6ZP82 1450 aa25.55■■□□□ 1.68
IFT20-202ENST00000357896 DEPDC5O75140 1603 aa25.54■■□□□ 1.68
IFT20-202ENST00000357896 TSPY4P0CV99 314 aa25.5■■□□□ 1.67
IFT20-202ENST00000357896 TSPY10P0CW01 314 aa25.5■■□□□ 1.67
IFT20-202ENST00000357896 ALKQ9UM73 1620 aa25.48■■□□□ 1.67
IFT20-202ENST00000357896 CAMSAP2Q08AD1 1489 aa25.47■■□□□ 1.67
IFT20-202ENST00000357896 IQGAP1P46940 1657 aa25.46■■□□□ 1.67
IFT20-202ENST00000357896 LRRC7Q96NW7 1537 aa25.45■■□□□ 1.66
IFT20-202ENST00000357896 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
IFT20-202ENST00000357896 NCOA2Q15596 1464 aa25.42■■□□□ 1.66
IFT20-202ENST00000357896 SYNMO15061 1565 aa25.4■■□□□ 1.66
IFT20-202ENST00000357896 RNF17Q9BXT8 1623 aaKnown RBP25.4■■□□□ 1.66
IFT20-202ENST00000357896 ARHGEF5Q12774 1597 aa25.39■■□□□ 1.66
IFT20-202ENST00000357896 ABCC3O15438 1527 aa25.37■■□□□ 1.65
IFT20-202ENST00000357896 STRCP1A6NGW2 1772 aa25.36■■□□□ 1.65
IFT20-202ENST00000357896 ZC3H13Q5T200 1668 aaKnown RBP25.36■■□□□ 1.65
IFT20-202ENST00000357896 ERVK-7P63135 1459 aa25.34■■□□□ 1.65
IFT20-202ENST00000357896 SCAF11Q99590 1463 aaKnown RBP25.32■■□□□ 1.64
IFT20-202ENST00000357896 TXNDC2Q86VQ3 553 aa25.31■■□□□ 1.64
IFT20-202ENST00000357896 RGS17Q9UGC6 210 aaPredicted RBP25.3■■□□□ 1.64
IFT20-202ENST00000357896 EID1Q9Y6B2 187 aa25.29■■□□□ 1.64
IFT20-202ENST00000357896 EIF2AK4Q9P2K8 1649 aaKnown RBP25.28■■□□□ 1.64
IFT20-202ENST00000357896 LTKP29376 864 aa25.28■■□□□ 1.64
IFT20-202ENST00000357896 MAST1Q9Y2H9 1570 aa25.27■■□□□ 1.64
IFT20-202ENST00000357896 UBR1Q8IWV7 1749 aa25.26■■□□□ 1.63
IFT20-202ENST00000357896 SLIT1O75093 1534 aa25.24■■□□□ 1.63
IFT20-202ENST00000357896 ARHGAP23Q9P227 1491 aa25.24■■□□□ 1.63
IFT20-202ENST00000357896 FAM135BQ49AJ0 1406 aa25.23■■□□□ 1.63
IFT20-202ENST00000357896 MROH1Q8NDA8 1641 aa25.21■■□□□ 1.63
IFT20-202ENST00000357896 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.62
IFT20-202ENST00000357896 DUOX2Q9NRD8 1548 aa25.18■■□□□ 1.62
IFT20-202ENST00000357896 LRRC9Q6ZRR7 1453 aa25.17■■□□□ 1.62
IFT20-202ENST00000357896 STAG3Q9UJ98 1225 aa25.17■■□□□ 1.62
IFT20-202ENST00000357896 CEP152O94986 1710 aa25.17■■□□□ 1.62
IFT20-202ENST00000357896 CFAP65Q6ZU64 1925 aaKnown RBP25.16■■□□□ 1.62
IFT20-202ENST00000357896 TMEM2Q9UHN6 1383 aa25.16■■□□□ 1.62
IFT20-202ENST00000357896 MYOM3Q5VTT5 1437 aa25.15■■□□□ 1.62
IFT20-202ENST00000357896 XIRP1Q702N8 1843 aaKnown RBP25.14■■□□□ 1.62
IFT20-202ENST00000357896 POTEAQ6S8J7 498 aa25.14■■□□□ 1.62
IFT20-202ENST00000357896 TMEM94Q12767 1356 aa25.14■■□□□ 1.61
IFT20-202ENST00000357896 KCNA6P17658 529 aa25.13■■□□□ 1.61
IFT20-202ENST00000357896 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
IFT20-202ENST00000357896 PROSER2Q86WR7 435 aaPredicted RBP25.1■■□□□ 1.61
IFT20-202ENST00000357896 PRDM15P57071 1507 aaPredicted RBP25.1■■□□□ 1.61
IFT20-202ENST00000357896 ERBINQ96RT1 1412 aa25.1■■□□□ 1.61
IFT20-202ENST00000357896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.09■■□□□ 1.613e-6■■□□□ 11.7
IFT20-202ENST00000357896 KANK1Q14678 1352 aa25.08■■□□□ 1.61
IFT20-202ENST00000357896 RRP7BPQ9NSQ0 103 aa25.07■■□□□ 1.6
IFT20-202ENST00000357896 PIK3C2BO00750 1634 aa25.07■■□□□ 1.6
IFT20-202ENST00000357896 VPS8Q8N3P4 1428 aa25.05■■□□□ 1.6
IFT20-202ENST00000357896 IDI1Q13907 227 aa25.05■■□□□ 1.6
IFT20-202ENST00000357896 SLC26A8Q96RN1 970 aa25.05■■□□□ 1.6
IFT20-202ENST00000357896 EFCAB6Q5THR3 1501 aa25.05■■□□□ 1.6
IFT20-202ENST00000357896 KDM5AP29375 1690 aaKnown RBP25.04■■□□□ 1.6
IFT20-202ENST00000357896 ROBO1Q9Y6N7 1651 aa25.04■■□□□ 1.6
IFT20-202ENST00000357896 KANK4Q5T7N3 995 aaPredicted RBP25.04■■□□□ 1.6
IFT20-202ENST00000357896 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
IFT20-202ENST00000357896 RBM33Q96EV2 1170 aaKnown RBP25.01■■□□□ 1.59
IFT20-202ENST00000357896 MSH6P52701 1360 aa25.01■■□□□ 1.59
IFT20-202ENST00000357896 TET3O43151 1660 aa25.01■■□□□ 1.59
IFT20-202ENST00000357896 SLAIN2Q9P270 581 aa25■■□□□ 1.59
IFT20-202ENST00000357896 NKTRP30414 1462 aaKnown RBP25■■□□□ 1.59
IFT20-202ENST00000357896 ABCC5O15440 1437 aa24.99■■□□□ 1.59
IFT20-202ENST00000357896 BCANQ96GW7 911 aa24.99■■□□□ 1.59
IFT20-202ENST00000357896 JCADQ9P266 1359 aa24.98■■□□□ 1.59
IFT20-202ENST00000357896 SLC52A1Q9NWF4 448 aa24.97■■□□□ 1.59
IFT20-202ENST00000357896 LMTK2Q8IWU2 1503 aa24.96■■□□□ 1.59
IFT20-202ENST00000357896 NWD1Q149M9 1564 aa24.93■■□□□ 1.58
IFT20-202ENST00000357896 NOS1P29475 1434 aa24.92■■□□□ 1.58
IFT20-202ENST00000357896 ANKRD30AQ9BXX3 1397 aa24.92■■□□□ 1.58
IFT20-202ENST00000357896 CROCC2H7BZ55 1655 aa24.91■■□□□ 1.58
IFT20-202ENST00000357896 HDGFP51858 240 aaKnown RBP24.91■■□□□ 1.58
IFT20-202ENST00000357896 DAPK1P53355 1430 aa24.91■■□□□ 1.58
IFT20-202ENST00000357896 ADGRB3O60242 1522 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms