RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 NISCHQ9Y2I1 1504 aa40.37■■■■■ 4.05
IFT20-202ENST00000357896 ABCC9O60706 1549 aa36.96■■■■□ 3.51
IFT20-202ENST00000357896 CCDC180Q9P1Z9 1646 aa36.42■■■■□ 3.42
IFT20-202ENST00000357896 DNAJC5BQ9UF47 199 aa35.17■■■■□ 3.22
IFT20-202ENST00000357896 RB1CC1Q8TDY2 1594 aa34.98■■■■□ 3.19
IFT20-202ENST00000357896 NACADO15069 1562 aa34.62■■■■□ 3.13
IFT20-202ENST00000357896 DCAF8L2P0C7V8 631 aa34.39■■■■□ 3.1
IFT20-202ENST00000357896 PABPN1Q86U42 306 aaKnown RBP eCLIP34.37■■■■□ 3.09
IFT20-202ENST00000357896 UNC13AQ9UPW8 1703 aa34.04■■■■□ 3.04
IFT20-202ENST00000357896 MYO15BQ96JP2 1530 aa33.99■■■■□ 3.03
IFT20-202ENST00000357896 BICRAQ9NZM4 1560 aa33.91■■■■□ 3.02
IFT20-202ENST00000357896 SHROOM4Q9ULL8 1493 aa33.51■■■□□ 2.96
IFT20-202ENST00000357896 CECR2Q9BXF3 1484 aa33.39■■■□□ 2.94
IFT20-202ENST00000357896 CC2D2AQ9P2K1 1620 aa33.35■■■□□ 2.93
IFT20-202ENST00000357896 DCAF1Q9Y4B6 1507 aa33.33■■■□□ 2.93
IFT20-202ENST00000357896 ZCCHC6Q5VYS8 1495 aaKnown RBP33.31■■■□□ 2.92
IFT20-202ENST00000357896 EIF4G1Q04637 1599 aaKnown RBP33.16■■■□□ 2.9
IFT20-202ENST00000357896 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
IFT20-202ENST00000357896 DNAJC5Q9H3Z4 198 aa32.78■■■□□ 2.84
IFT20-202ENST00000357896 CUX2O14529 1486 aa32.14■■■□□ 2.74
IFT20-202ENST00000357896 ERCC6Q03468 1493 aa32.01■■■□□ 2.71
IFT20-202ENST00000357896 NCAPD3P42695 1498 aa31.99■■■□□ 2.71
IFT20-202ENST00000357896 ATAD2BQ9ULI0 1458 aa31.78■■■□□ 2.68
IFT20-202ENST00000357896 SMARCA2P51531 1590 aa31.68■■■□□ 2.66
IFT20-202ENST00000357896 HMGXB3Q12766 1538 aa31.66■■■□□ 2.66
IFT20-202ENST00000357896 NESP48681 1621 aa31.57■■■□□ 2.64
IFT20-202ENST00000357896 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
IFT20-202ENST00000357896 BAZ1BQ9UIG0 1483 aaKnown RBP31.46■■■□□ 2.63
IFT20-202ENST00000357896 BAZ1AQ9NRL2 1556 aaPredicted RBP31.39■■■□□ 2.61
IFT20-202ENST00000357896 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
IFT20-202ENST00000357896 LAMC3Q9Y6N6 1575 aa31.32■■■□□ 2.6
IFT20-202ENST00000357896 PEG3Q9GZU2 1588 aa31.3■■■□□ 2.6
IFT20-202ENST00000357896 PDS5BQ9NTI5 1447 aa31.23■■■□□ 2.59
IFT20-202ENST00000357896 KIF21AQ7Z4S6 1674 aa31.11■■■□□ 2.57
IFT20-202ENST00000357896 TRIM41Q8WV44 630 aa31.09■■■□□ 2.57
IFT20-202ENST00000357896 MROH2BQ7Z745 1585 aa31.06■■■□□ 2.56
IFT20-202ENST00000357896 CADPSQ9ULU8 1353 aa31■■■□□ 2.55
IFT20-202ENST00000357896 MRC2Q9UBG0 1479 aa30.93■■■□□ 2.54
IFT20-202ENST00000357896 WDR62O43379 1518 aa30.85■■■□□ 2.53
IFT20-202ENST00000357896 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.5
IFT20-202ENST00000357896 OSCARQ8IYS5 282 aa30.66■■■□□ 2.5
IFT20-202ENST00000357896 WIZO95785 1651 aa30.63■■■□□ 2.49
IFT20-202ENST00000357896 FANCD2Q9BXW9 1451 aa30.62■■■□□ 2.49
IFT20-202ENST00000357896 CFTRP13569 1480 aa30.51■■■□□ 2.48
IFT20-202ENST00000357896 URB2Q14146 1524 aaKnown RBP30.36■■■□□ 2.45
IFT20-202ENST00000357896 RSF1Q96T23 1441 aaPredicted RBP30.26■■■□□ 2.43
IFT20-202ENST00000357896 TOP2AP11388 1531 aaKnown RBP30.25■■■□□ 2.43
IFT20-202ENST00000357896 RIMBP3CA6NJZ7 1639 aa30.17■■■□□ 2.42
IFT20-202ENST00000357896 RIMBP3BA6NNM3 1639 aa30.17■■■□□ 2.42
IFT20-202ENST00000357896 RIMBP3Q9UFD9 1639 aa30.17■■■□□ 2.42
IFT20-202ENST00000357896 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
IFT20-202ENST00000357896 ZNF608Q9ULD9 1512 aaPredicted RBP30.07■■■□□ 2.4
IFT20-202ENST00000357896 ARHGEF11O15085 1522 aa30.05■■■□□ 2.4
IFT20-202ENST00000357896 PRDM2Q13029 1718 aa30.04■■■□□ 2.4
IFT20-202ENST00000357896 TOPBP1Q92547 1522 aa29.95■■■□□ 2.38
IFT20-202ENST00000357896 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
IFT20-202ENST00000357896 CYB5RLQ6IPT4 315 aa29.94■■■□□ 2.38
IFT20-202ENST00000357896 CCDC88BA6NC98 1476 aa29.93■■■□□ 2.38
IFT20-202ENST00000357896 EIF4G3O43432 1585 aaKnown RBP29.86■■■□□ 2.37
IFT20-202ENST00000357896 TRHP20396 242 aaPredicted RBP29.8■■■□□ 2.36
IFT20-202ENST00000357896 DNMBPQ6XZF7 1577 aa29.79■■■□□ 2.36
IFT20-202ENST00000357896 AQRO60306 1485 aaKnown RBP eCLIP29.76■■■□□ 2.35
IFT20-202ENST00000357896 FBLN2P98095 1184 aa29.74■■■□□ 2.35
IFT20-202ENST00000357896 ARAP1Q96P48 1450 aa29.7■■■□□ 2.35
IFT20-202ENST00000357896 CHD1O14646 1710 aa29.7■■■□□ 2.34
IFT20-202ENST00000357896 TARBP1Q13395 1621 aaKnown RBP29.7■■■□□ 2.34
IFT20-202ENST00000357896 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
IFT20-202ENST00000357896 SOGA1O94964 1423 aa29.52■■■□□ 2.32
IFT20-202ENST00000357896 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
IFT20-202ENST00000357896 RAD54L2Q9Y4B4 1467 aa29.5■■■□□ 2.31
IFT20-202ENST00000357896 CHMP7Q8WUX9 453 aaPredicted RBP29.46■■■□□ 2.31
IFT20-202ENST00000357896 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
IFT20-202ENST00000357896 WDR97A6NE52 1622 aa29.42■■■□□ 2.3
IFT20-202ENST00000357896 CLASP1Q7Z460 1538 aa29.4■■■□□ 2.3
IFT20-202ENST00000357896 SYNJ1O43426 1573 aa29.38■■■□□ 2.29
IFT20-202ENST00000357896 MAGI1Q96QZ7 1491 aaPredicted RBP29.37■■■□□ 2.29
IFT20-202ENST00000357896 AEBP2Q6ZN18 517 aaPredicted RBP29.36■■■□□ 2.29
IFT20-202ENST00000357896 FGD5Q6ZNL6 1462 aa29.35■■■□□ 2.29
IFT20-202ENST00000357896 GRIN2BQ13224 1484 aa29.31■■■□□ 2.28
IFT20-202ENST00000357896 SYNJ2O15056 1496 aa29.28■■■□□ 2.28
IFT20-202ENST00000357896 CUX1P39880 1505 aa29.21■■■□□ 2.27
IFT20-202ENST00000357896 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
IFT20-202ENST00000357896 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
IFT20-202ENST00000357896 ABCA10Q8WWZ4 1543 aa29■■■□□ 2.23
IFT20-202ENST00000357896 ABCA5Q8WWZ7 1642 aa28.95■■■□□ 2.23
IFT20-202ENST00000357896 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
IFT20-202ENST00000357896 ERCC6L2Q5T890 1561 aa28.86■■■□□ 2.21
IFT20-202ENST00000357896 NUP160Q12769 1436 aa28.85■■■□□ 2.21
IFT20-202ENST00000357896 WRNQ14191 1432 aaPredicted RBP eCLIP28.84■■■□□ 2.21
IFT20-202ENST00000357896 CEP170Q5SW79 1584 aa28.83■■■□□ 2.21
IFT20-202ENST00000357896 ADAMTS12P58397 1594 aa28.78■■■□□ 2.2
IFT20-202ENST00000357896 FHAD1B1AJZ9 1412 aa28.76■■■□□ 2.19
IFT20-202ENST00000357896 SHROOM2Q13796 1616 aa28.73■■■□□ 2.19
IFT20-202ENST00000357896 ERICH3Q5RHP9 1530 aa28.64■■■□□ 2.18
IFT20-202ENST00000357896 PRG4Q92954 1404 aaPredicted RBP28.63■■■□□ 2.17
IFT20-202ENST00000357896 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
IFT20-202ENST00000357896 JPH4Q96JJ6 628 aa28.61■■■□□ 2.17
IFT20-202ENST00000357896 KIF13AQ9H1H9 1805 aa28.6■■■□□ 2.17
IFT20-202ENST00000357896 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
IFT20-202ENST00000357896 NPM1P06748 294 aaKnown RBP eCLIP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms