RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 USP35Q9P2H5 1018 aa31.53■■■□□ 2.64
NPAS3-203ENST00000357798 IFT140Q96RY7 1462 aa31.51■■■□□ 2.63
NPAS3-203ENST00000357798 GRIN2AQ12879 1464 aa31.51■■■□□ 2.63
NPAS3-203ENST00000357798 INSRP06213 1382 aa31.5■■■□□ 2.63
NPAS3-203ENST00000357798 ZNF777Q9ULD5 760 aaPredicted RBP31.5■■■□□ 2.63
NPAS3-203ENST00000357798 ZMYM4Q5VZL5 1548 aa31.5■■■□□ 2.63
NPAS3-203ENST00000357798 NPM2Q86SE8 214 aaKnown RBP31.49■■■□□ 2.63
NPAS3-203ENST00000357798 PTPRGP23470 1445 aa31.48■■■□□ 2.63
NPAS3-203ENST00000357798 C9orf84Q5VXU9 1444 aa31.48■■■□□ 2.63
NPAS3-203ENST00000357798 ZNF608Q9ULD9 1512 aaPredicted RBP31.46■■■□□ 2.63
NPAS3-203ENST00000357798 TRPM1Q7Z4N2 1603 aa31.45■■■□□ 2.63
NPAS3-203ENST00000357798 PLB1Q6P1J6 1458 aa31.45■■■□□ 2.62
NPAS3-203ENST00000357798 PPM1GO15355 546 aaPredicted RBP31.41■■■□□ 2.62
NPAS3-203ENST00000357798 KDM2AQ9Y2K7 1162 aa31.41■■■□□ 2.62
NPAS3-203ENST00000357798 DCAF11Q8TEB1 546 aa31.4■■■□□ 2.62
NPAS3-203ENST00000357798 BLMP54132 1417 aaPredicted RBP31.4■■■□□ 2.62
NPAS3-203ENST00000357798 ABCC10Q5T3U5 1492 aa31.38■■■□□ 2.61
NPAS3-203ENST00000357798 NEFMP07197 916 aa31.38■■■□□ 2.61
NPAS3-203ENST00000357798 PLEKHH2Q8IVE3 1493 aa31.37■■■□□ 2.61
NPAS3-203ENST00000357798 LAMC1P11047 1609 aa31.37■■■□□ 2.61
NPAS3-203ENST00000357798 WASHC2CQ9Y4E1 1318 aa31.36■■■□□ 2.61
NPAS3-203ENST00000357798 PRAG1Q86YV5 1406 aa31.35■■■□□ 2.61
NPAS3-203ENST00000357798 LAS1LQ9Y4W2 734 aaKnown RBP31.35■■■□□ 2.61
NPAS3-203ENST00000357798 ARHGEF5Q12774 1597 aa31.35■■■□□ 2.61
NPAS3-203ENST00000357798 DNAJC5BQ9UF47 199 aa31.34■■■□□ 2.61
NPAS3-203ENST00000357798 DDRGK1Q96HY6 314 aa31.34■■■□□ 2.61
NPAS3-203ENST00000357798 PER1O15534 1290 aaPredicted RBP31.34■■■□□ 2.61
NPAS3-203ENST00000357798 SALL2Q9Y467 1007 aaPredicted RBP31.34■■■□□ 2.61
NPAS3-203ENST00000357798 EIF4G3O43432 1585 aaKnown RBP31.33■■■□□ 2.61
NPAS3-203ENST00000357798 COL17A1Q9UMD9 1497 aaPredicted RBP31.33■■■□□ 2.61
NPAS3-203ENST00000357798 CDCA7LQ96GN5 454 aa31.31■■■□□ 2.6
NPAS3-203ENST00000357798 GPRASP1Q5JY77 1395 aa31.31■■■□□ 2.6
NPAS3-203ENST00000357798 TSPY4P0CV99 314 aa31.29■■■□□ 2.6
NPAS3-203ENST00000357798 TSPY10P0CW01 314 aa31.29■■■□□ 2.6
NPAS3-203ENST00000357798 FAM135AQ9P2D6 1515 aa31.28■■■□□ 2.6
NPAS3-203ENST00000357798 CARMIL2Q6F5E8 1435 aa31.27■■■□□ 2.6
NPAS3-203ENST00000357798 MAGI1Q96QZ7 1491 aaPredicted RBP31.27■■■□□ 2.6
NPAS3-203ENST00000357798 ABCA8O94911 1581 aa31.26■■■□□ 2.6
NPAS3-203ENST00000357798 PRDM15P57071 1507 aaPredicted RBP31.26■■■□□ 2.59
NPAS3-203ENST00000357798 CRBNQ96SW2 442 aa31.25■■■□□ 2.59
NPAS3-203ENST00000357798 IL27Q8NEV9 243 aa31.23■■■□□ 2.59
NPAS3-203ENST00000357798 PLEKHD1A6NEE1 506 aa31.22■■■□□ 2.59
NPAS3-203ENST00000357798 CCDC144AA2RUR9 1427 aa31.21■■■□□ 2.59
NPAS3-203ENST00000357798 PLIN1O60240 522 aa31.21■■■□□ 2.59
NPAS3-203ENST00000357798 EIF2AK4Q9P2K8 1649 aaKnown RBP31.19■■■□□ 2.58
NPAS3-203ENST00000357798 ATP10BO94823 1461 aa31.17■■■□□ 2.58
NPAS3-203ENST00000357798 A2MP01023 1474 aa31.16■■■□□ 2.58
NPAS3-203ENST00000357798 DISP3Q9P2K9 1392 aa31.16■■■□□ 2.58
NPAS3-203ENST00000357798 SYNJ2O15056 1496 aa31.16■■■□□ 2.58
NPAS3-203ENST00000357798 KDM2BQ8NHM5 1336 aa31.16■■■□□ 2.58
NPAS3-203ENST00000357798 CCDC141Q6ZP82 1450 aa31.15■■■□□ 2.58
NPAS3-203ENST00000357798 UNC13BO14795 1591 aa31.15■■■□□ 2.58
NPAS3-203ENST00000357798 TESK2Q96S53 571 aa31.15■■■□□ 2.58
NPAS3-203ENST00000357798 ERBINQ96RT1 1412 aa31.14■■■□□ 2.58
NPAS3-203ENST00000357798 MYO5CQ9NQX4 1742 aa31.14■■■□□ 2.58
NPAS3-203ENST00000357798 NBPF1Q3BBV0 1214 aa31.13■■■□□ 2.57
NPAS3-203ENST00000357798 CC2D1BQ5T0F9 858 aaKnown RBP31.13■■■□□ 2.57
NPAS3-203ENST00000357798 CENPQQ7L2Z9 268 aaPredicted RBP31.1■■■□□ 2.57
NPAS3-203ENST00000357798 PANK3Q9H999 370 aa31.1■■■□□ 2.57
NPAS3-203ENST00000357798 HNRNPMP52272 730 aaKnown RBP eCLIP31.1■■■□□ 2.57
NPAS3-203ENST00000357798 NUP160Q12769 1436 aa31.1■■■□□ 2.57
NPAS3-203ENST00000357798 SAMD9LQ8IVG5 1584 aa31.09■■■□□ 2.57
NPAS3-203ENST00000357798 PLA2R1Q13018 1463 aa31.09■■■□□ 2.57
NPAS3-203ENST00000357798 ANO8Q9HCE9 1232 aaPredicted RBP31.09■■■□□ 2.57
NPAS3-203ENST00000357798 PREX2Q70Z35 1606 aa31.07■■■□□ 2.56
NPAS3-203ENST00000357798 CHMP7Q8WUX9 453 aaPredicted RBP31.07■■■□□ 2.56
NPAS3-203ENST00000357798 SKAP1Q86WV1 359 aa31.06■■■□□ 2.56
NPAS3-203ENST00000357798 JPH4Q96JJ6 628 aa31.06■■■□□ 2.56
NPAS3-203ENST00000357798 MAST1Q9Y2H9 1570 aa31.05■■■□□ 2.56
NPAS3-203ENST00000357798 RNF17Q9BXT8 1623 aaKnown RBP31.05■■■□□ 2.56
NPAS3-203ENST00000357798 CDC42BPBQ9Y5S2 1711 aa31.05■■■□□ 2.56
NPAS3-203ENST00000357798 TMF1P82094 1093 aa31.05■■■□□ 2.56
NPAS3-203ENST00000357798 C20orf194Q5TEA3 1177 aa31.05■■■□□ 2.56
NPAS3-203ENST00000357798 GSE1Q14687 1217 aa31.04■■■□□ 2.56
NPAS3-203ENST00000357798 RSPH4AQ5TD94 716 aa31.04■■■□□ 2.56
NPAS3-203ENST00000357798 NFKBIBQ15653 356 aa31.03■■■□□ 2.56
NPAS3-203ENST00000357798 IQGAP3Q86VI3 1631 aa31.03■■■□□ 2.56
NPAS3-203ENST00000357798 CLASP1Q7Z460 1538 aa31.03■■■□□ 2.56
NPAS3-203ENST00000357798 RGL3Q3MIN7 710 aa31.01■■■□□ 2.56
NPAS3-203ENST00000357798 FAM161AQ3B820 660 aa31.01■■■□□ 2.55
NPAS3-203ENST00000357798 PRKCSHP14314 528 aaPredicted RBP30.99■■■□□ 2.55
NPAS3-203ENST00000357798 ADAMTS8Q9UP79 889 aa30.99■■■□□ 2.55
NPAS3-203ENST00000357798 RTN4Q9NQC3 1192 aaKnown RBP30.99■■■□□ 2.55
NPAS3-203ENST00000357798 DUSP27Q5VZP5 1158 aa30.98■■■□□ 2.55
NPAS3-203ENST00000357798 DAXXQ9UER7 740 aaPredicted RBP30.98■■■□□ 2.55
NPAS3-203ENST00000357798 ATP10AO60312 1499 aa30.97■■■□□ 2.55
NPAS3-203ENST00000357798 PLEKHH1Q9ULM0 1364 aa30.97■■■□□ 2.55
NPAS3-203ENST00000357798 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.96■■■□□ 2.55
NPAS3-203ENST00000357798 ZNF521Q96K83 1311 aa30.96■■■□□ 2.55
NPAS3-203ENST00000357798 C8orf34Q49A92 452 aa30.95■■■□□ 2.55
NPAS3-203ENST00000357798 PLXNC1O60486 1568 aa30.94■■■□□ 2.54
NPAS3-203ENST00000357798 WDR7Q9Y4E6 1490 aa30.93■■■□□ 2.54
NPAS3-203ENST00000357798 MAGI2Q86UL8 1455 aa30.91■■■□□ 2.54
NPAS3-203ENST00000357798 WDR43Q15061 677 aaKnown RBP eCLIP30.91■■■□□ 2.54
NPAS3-203ENST00000357798 PPP2R1AP30153 589 aa30.9■■■□□ 2.54
NPAS3-203ENST00000357798 GOLGA2Q08379 1002 aa30.9■■■□□ 2.54
NPAS3-203ENST00000357798 SYCP2Q9BX26 1530 aa30.9■■■□□ 2.54
NPAS3-203ENST00000357798 IQGAP1P46940 1657 aa30.89■■■□□ 2.54
NPAS3-203ENST00000357798 SYNMO15061 1565 aa30.89■■■□□ 2.53
NPAS3-203ENST00000357798 SLC4A3P48751 1232 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms