RNA–Protein interactions for RNA: ENST00000352591.9

CEACAM1-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 3,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-203ENST00000352591 ARAP3Q8WWN8 1544 aa9.04□□□□□ -0.96
CEACAM1-203ENST00000352591 WDR7Q9Y4E6 1490 aa9.04□□□□□ -0.96
CEACAM1-203ENST00000352591 MAGI2Q86UL8 1455 aa9.03□□□□□ -0.96
CEACAM1-203ENST00000352591 DUOX2Q9NRD8 1548 aa9.03□□□□□ -0.96
CEACAM1-203ENST00000352591 ABCA9Q8IUA7 1624 aa9.03□□□□□ -0.96
CEACAM1-203ENST00000352591 TRAPPC8Q9Y2L5 1435 aa9.03□□□□□ -0.96
CEACAM1-203ENST00000352591 UHRF1BP1Q6BDS2 1440 aa9.02□□□□□ -0.97
CEACAM1-203ENST00000352591 KDM5CP41229 1560 aa9.02□□□□□ -0.97
CEACAM1-203ENST00000352591 DCAF11Q8TEB1 546 aa9.02□□□□□ -0.97
CEACAM1-203ENST00000352591 CCER2I3L3R5 266 aa9.02□□□□□ -0.97
CEACAM1-203ENST00000352591 B4GALNT3Q6L9W6 998 aa9.02□□□□□ -0.97
CEACAM1-203ENST00000352591 ZFYVE16Q7Z3T8 1539 aa9.01□□□□□ -0.97
CEACAM1-203ENST00000352591 BCORL1Q5H9F3 1711 aa9.01□□□□□ -0.97
CEACAM1-203ENST00000352591 CCDC7Q96M83 1385 aa9.01□□□□□ -0.97
CEACAM1-203ENST00000352591 ERBINQ96RT1 1412 aa9.01□□□□□ -0.97
CEACAM1-203ENST00000352591 CNTLNQ9NXG0 1405 aa9.01□□□□□ -0.97
CEACAM1-203ENST00000352591 EFCAB2Q5VUJ9 269 aa9.01□□□□□ -0.97
CEACAM1-203ENST00000352591 PLA2R1Q13018 1463 aa9□□□□□ -0.97
CEACAM1-203ENST00000352591 RALGAPBQ86X10 1494 aa9□□□□□ -0.97
CEACAM1-203ENST00000352591 INO80Q9ULG1 1556 aaPredicted RBP8.99□□□□□ -0.97
CEACAM1-203ENST00000352591 CARD11Q9BXL7 1154 aa8.99□□□□□ -0.97
CEACAM1-203ENST00000352591 ASXL2Q76L83 1435 aa8.98□□□□□ -0.97
CEACAM1-203ENST00000352591 USP47Q96K76 1375 aa8.98□□□□□ -0.97
CEACAM1-203ENST00000352591 KIF7Q2M1P5 1343 aa8.98□□□□□ -0.97
CEACAM1-203ENST00000352591 FANCAO15360 1455 aa8.98□□□□□ -0.97
CEACAM1-203ENST00000352591 DEPDC5O75140 1603 aa8.97□□□□□ -0.97
CEACAM1-203ENST00000352591 CCDC144AA2RUR9 1427 aa8.97□□□□□ -0.97
CEACAM1-203ENST00000352591 RTEL1-TNFRSF6BF6WH68 1400 aa8.97□□□□□ -0.97
CEACAM1-203ENST00000352591 TRPM1Q7Z4N2 1603 aa8.97□□□□□ -0.97
CEACAM1-203ENST00000352591 E9PCH4 1651 aa8.96□□□□□ -0.97
CEACAM1-203ENST00000352591 ATP7AQ04656 1500 aa8.96□□□□□ -0.97
CEACAM1-203ENST00000352591 ATP10AO60312 1499 aa8.96□□□□□ -0.98
CEACAM1-203ENST00000352591 CC2D1BQ5T0F9 858 aaKnown RBP8.96□□□□□ -0.98
CEACAM1-203ENST00000352591 AFAP1Q8N556 730 aa8.96□□□□□ -0.98
CEACAM1-203ENST00000352591 TMC1Q8TDI8 760 aa8.96□□□□□ -0.98
CEACAM1-203ENST00000352591 A2MP01023 1474 aa8.95□□□□□ -0.98
CEACAM1-203ENST00000352591 SPAG9O60271 1321 aaKnown RBP8.95□□□□□ -0.98
CEACAM1-203ENST00000352591 CHGAP10645 457 aaKnown RBP8.95□□□□□ -0.98
CEACAM1-203ENST00000352591 ERICH6Q7L0X2 663 aa8.95□□□□□ -0.98
CEACAM1-203ENST00000352591 OSCARQ8IYS5 282 aa8.95□□□□□ -0.98
CEACAM1-203ENST00000352591 PRAG1Q86YV5 1406 aa8.95□□□□□ -0.98
CEACAM1-203ENST00000352591 ADGRL1O94910 1474 aa8.95□□□□□ -0.98
CEACAM1-203ENST00000352591 ST20-MTHFSA0A0A6YYL1 179 aa8.94□□□□□ -0.98
CEACAM1-203ENST00000352591 MYT1Q01538 1121 aa8.94□□□□□ -0.98
CEACAM1-203ENST00000352591 PRKRIP1Q9H875 184 aaPredicted RBP8.94□□□□□ -0.98
CEACAM1-203ENST00000352591 MROH1Q8NDA8 1641 aa8.93□□□□□ -0.98
CEACAM1-203ENST00000352591 VWDEQ8N2E2 1590 aa8.93□□□□□ -0.98
CEACAM1-203ENST00000352591 SPHKAPQ2M3C7 1700 aa8.93□□□□□ -0.98
CEACAM1-203ENST00000352591 SCAPERQ9BY12 1400 aa8.93□□□□□ -0.98
CEACAM1-203ENST00000352591 KIDINS220Q9ULH0 1771 aa8.92□□□□□ -0.98
CEACAM1-203ENST00000352591 EIF2AK4Q9P2K8 1649 aaKnown RBP8.92□□□□□ -0.98
CEACAM1-203ENST00000352591 RBM19Q9Y4C8 960 aaKnown RBP8.92□□□□□ -0.98
CEACAM1-203ENST00000352591 TET3O43151 1660 aa8.92□□□□□ -0.98
CEACAM1-203ENST00000352591 DHX29Q7Z478 1369 aaKnown RBP8.91□□□□□ -0.98
CEACAM1-203ENST00000352591 TRPM2O94759 1503 aa8.91□□□□□ -0.98
CEACAM1-203ENST00000352591 LAMC1P11047 1609 aa8.91□□□□□ -0.98
CEACAM1-203ENST00000352591 CEP152O94986 1710 aa8.91□□□□□ -0.98
CEACAM1-203ENST00000352591 NPM2Q86SE8 214 aaKnown RBP8.91□□□□□ -0.98
CEACAM1-203ENST00000352591 PRDM15P57071 1507 aaPredicted RBP8.91□□□□□ -0.98
CEACAM1-203ENST00000352591 ROCK2O75116 1388 aaKnown RBP8.91□□□□□ -0.98
CEACAM1-203ENST00000352591 NBPF1Q3BBV0 1214 aa8.91□□□□□ -0.98
CEACAM1-203ENST00000352591 CLTCL1P53675 1640 aa8.9□□□□□ -0.98
CEACAM1-203ENST00000352591 RNF17Q9BXT8 1623 aaKnown RBP8.9□□□□□ -0.98
CEACAM1-203ENST00000352591 CFAP74Q9C0B2 1584 aa8.89□□□□□ -0.99
CEACAM1-203ENST00000352591 GPRASP1Q5JY77 1395 aa8.89□□□□□ -0.99
CEACAM1-203ENST00000352591 NUTM2DQ5VT03 806 aaPredicted RBP8.89□□□□□ -0.99
CEACAM1-203ENST00000352591 PTPRTO14522 1441 aa8.89□□□□□ -0.99
CEACAM1-203ENST00000352591 ARID4BQ4LE39 1312 aaPredicted RBP8.89□□□□□ -0.99
CEACAM1-203ENST00000352591 MADDQ8WXG6 1647 aa8.89□□□□□ -0.99
CEACAM1-203ENST00000352591 ZNF518AQ6AHZ1 1483 aa8.88□□□□□ -0.99
CEACAM1-203ENST00000352591 TNNT2P45379 298 aaPredicted RBP8.88□□□□□ -0.99
CEACAM1-203ENST00000352591 FRMPD1Q5SYB0 1578 aa8.87□□□□□ -0.99
CEACAM1-203ENST00000352591 CD109Q6YHK3 1445 aa8.87□□□□□ -0.99
CEACAM1-203ENST00000352591 POGZQ7Z3K3 1410 aa8.87□□□□□ -0.99
CEACAM1-203ENST00000352591 PPRC1Q5VV67 1664 aaKnown RBP8.87□□□□□ -0.99
CEACAM1-203ENST00000352591 EFCAB6Q5THR3 1501 aa8.86□□□□□ -0.99
CEACAM1-203ENST00000352591 NPM1P06748 294 aaKnown RBP eCLIP8.86□□□□□ -0.99
CEACAM1-203ENST00000352591 HECW2Q9P2P5 1572 aa8.86□□□□□ -0.99
CEACAM1-203ENST00000352591 UGGT1Q9NYU2 1555 aa8.86□□□□□ -0.99
CEACAM1-203ENST00000352591 NBR1Q14596 966 aa8.85□□□□□ -0.99
CEACAM1-203ENST00000352591 SKAP1Q86WV1 359 aa8.85□□□□□ -0.99
CEACAM1-203ENST00000352591 CCDC136Q96JN2 1154 aa8.85□□□□□ -0.99
CEACAM1-203ENST00000352591 BCL11AQ9H165 835 aa8.85□□□□□ -0.99
CEACAM1-203ENST00000352591 ABCA6Q8N139 1617 aa8.85□□□□□ -0.99
CEACAM1-203ENST00000352591 KIF3BO15066 747 aa8.85□□□□□ -0.99
CEACAM1-203ENST00000352591 IQGAP1P46940 1657 aa8.85□□□□□ -0.99
CEACAM1-203ENST00000352591 COL17A1Q9UMD9 1497 aaPredicted RBP8.84□□□□□ -0.99
CEACAM1-203ENST00000352591 KANK1Q14678 1352 aa8.84□□□□□ -0.99
CEACAM1-203ENST00000352591 PLIN1O60240 522 aa8.84□□□□□ -0.99
CEACAM1-203ENST00000352591 PLPPR3Q6T4P5 718 aa8.84□□□□□ -0.99
CEACAM1-203ENST00000352591 MROH2AA6NES4 1674 aa8.84□□□□□ -0.99
CEACAM1-203ENST00000352591 LMTK2Q8IWU2 1503 aa8.84□□□□□ -0.99
CEACAM1-203ENST00000352591 NEURL4Q96JN8 1562 aa8.84□□□□□ -0.99
CEACAM1-203ENST00000352591 MLH3Q9UHC1 1453 aa8.84□□□□□ -0.99
CEACAM1-203ENST00000352591 SAFB2Q14151 953 aaKnown RBP eCLIP8.83□□□□□ -1
CEACAM1-203ENST00000352591 MAP3K4Q9Y6R4 1608 aa8.83□□□□□ -1
CEACAM1-203ENST00000352591 IFT172Q9UG01 1749 aa8.83□□□□□ -1
CEACAM1-203ENST00000352591 DISP3Q9P2K9 1392 aa8.83□□□□□ -1
CEACAM1-203ENST00000352591 NEUROD2Q15784 382 aa8.82□□□□□ -1
CEACAM1-203ENST00000352591 TESK2Q96S53 571 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms