RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 SHANK2Q9UPX8 1470 aa25.67■■□□□ 1.7
COPE-202ENST00000349893 HSPA1LP34931 641 aa25.67■■□□□ 1.7
COPE-202ENST00000349893 PZPP20742 1482 aa25.66■■□□□ 1.7
COPE-202ENST00000349893 TNRQ92752 1358 aa25.65■■□□□ 1.7
COPE-202ENST00000349893 ZNF644Q9H582 1327 aaPredicted RBP25.64■■□□□ 1.7
COPE-202ENST00000349893 TOM1O60784 492 aa25.64■■□□□ 1.7
COPE-202ENST00000349893 MTUS2Q5JR59 1369 aa25.64■■□□□ 1.69
COPE-202ENST00000349893 KDM5DQ9BY66 1539 aa25.63■■□□□ 1.69
COPE-202ENST00000349893 VWDEQ8N2E2 1590 aa25.63■■□□□ 1.69
COPE-202ENST00000349893 ALKQ9UM73 1620 aa25.61■■□□□ 1.69
COPE-202ENST00000349893 MED14O60244 1454 aa25.6■■□□□ 1.69
COPE-202ENST00000349893 EHBP1L1Q8N3D4 1523 aa25.6■■□□□ 1.69
COPE-202ENST00000349893 DEPDC5O75140 1603 aa25.59■■□□□ 1.69
COPE-202ENST00000349893 FBXO31Q5XUX0 539 aaPredicted RBP25.59■■□□□ 1.69
COPE-202ENST00000349893 CEP162Q5TB80 1403 aa25.58■■□□□ 1.69
COPE-202ENST00000349893 PIP4K2BP78356 416 aa25.58■■□□□ 1.69
COPE-202ENST00000349893 NLRP1Q9C000 1473 aa25.58■■□□□ 1.69
COPE-202ENST00000349893 ANKLE2Q86XL3 938 aa25.56■■□□□ 1.68
COPE-202ENST00000349893 SCAF1Q9H7N4 1312 aaKnown RBP25.56■■□□□ 1.68
COPE-202ENST00000349893 MIA2Q96PC5 1412 aa25.55■■□□□ 1.68
COPE-202ENST00000349893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.55■■□□□ 1.682e-7■■□□□ 12.9
COPE-202ENST00000349893 CCDC141Q6ZP82 1450 aa25.54■■□□□ 1.68
COPE-202ENST00000349893 KIF3BO15066 747 aa25.54■■□□□ 1.68
COPE-202ENST00000349893 UGGT1Q9NYU2 1555 aa25.53■■□□□ 1.68
COPE-202ENST00000349893 THEMISQ8N1K5 641 aaPredicted RBP25.53■■□□□ 1.68
COPE-202ENST00000349893 NPHP4O75161 1426 aaPredicted RBP25.53■■□□□ 1.68
COPE-202ENST00000349893 WASHC2CQ9Y4E1 1318 aa25.5■■□□□ 1.67
COPE-202ENST00000349893 IQGAP1P46940 1657 aa25.49■■□□□ 1.67
COPE-202ENST00000349893 RSPH4AQ5TD94 716 aa25.49■■□□□ 1.67
COPE-202ENST00000349893 CAMSAP2Q08AD1 1489 aa25.47■■□□□ 1.67
COPE-202ENST00000349893 STRCP1A6NGW2 1772 aa25.46■■□□□ 1.67
COPE-202ENST00000349893 ARHGEF5Q12774 1597 aa25.45■■□□□ 1.66
COPE-202ENST00000349893 SYNMO15061 1565 aa25.44■■□□□ 1.66
COPE-202ENST00000349893 LRRC7Q96NW7 1537 aa25.44■■□□□ 1.66
COPE-202ENST00000349893 RNF17Q9BXT8 1623 aaKnown RBP25.44■■□□□ 1.66
COPE-202ENST00000349893 NCOA2Q15596 1464 aa25.42■■□□□ 1.66
COPE-202ENST00000349893 ZC3H13Q5T200 1668 aaKnown RBP25.42■■□□□ 1.66
COPE-202ENST00000349893 PHF23Q9BUL5 403 aaPredicted RBP25.4■■□□□ 1.66
COPE-202ENST00000349893 ABCC3O15438 1527 aa25.4■■□□□ 1.66
COPE-202ENST00000349893 ERVK-7P63135 1459 aa25.36■■□□□ 1.65
COPE-202ENST00000349893 MAST1Q9Y2H9 1570 aa25.35■■□□□ 1.65
COPE-202ENST00000349893 EIF2AK4Q9P2K8 1649 aaKnown RBP25.34■■□□□ 1.65
COPE-202ENST00000349893 MROH1Q8NDA8 1641 aa25.33■■□□□ 1.65
COPE-202ENST00000349893 UBR1Q8IWV7 1749 aa25.32■■□□□ 1.64
COPE-202ENST00000349893 TSPY4P0CV99 314 aa25.32■■□□□ 1.64
COPE-202ENST00000349893 TSPY10P0CW01 314 aa25.32■■□□□ 1.64
COPE-202ENST00000349893 SCAF11Q99590 1463 aaKnown RBP25.29■■□□□ 1.64
COPE-202ENST00000349893 ARHGAP23Q9P227 1491 aa25.29■■□□□ 1.64
COPE-202ENST00000349893 SLIT1O75093 1534 aa25.28■■□□□ 1.64
COPE-202ENST00000349893 RGS17Q9UGC6 210 aaPredicted RBP25.26■■□□□ 1.63
COPE-202ENST00000349893 XIRP1Q702N8 1843 aaKnown RBP25.26■■□□□ 1.63
COPE-202ENST00000349893 CEP152O94986 1710 aa25.23■■□□□ 1.63
COPE-202ENST00000349893 ARHGAP31Q2M1Z3 1444 aa25.21■■□□□ 1.63
COPE-202ENST00000349893 LTKP29376 864 aa25.21■■□□□ 1.63
COPE-202ENST00000349893 FAM135BQ49AJ0 1406 aa25.19■■□□□ 1.62
COPE-202ENST00000349893 LRRC9Q6ZRR7 1453 aa25.18■■□□□ 1.62
COPE-202ENST00000349893 PRDM15P57071 1507 aaPredicted RBP25.17■■□□□ 1.62
COPE-202ENST00000349893 DUOX2Q9NRD8 1548 aa25.17■■□□□ 1.62
COPE-202ENST00000349893 SENP3Q9H4L4 574 aaPredicted RBP25.17■■□□□ 1.62
COPE-202ENST00000349893 CFAP65Q6ZU64 1925 aaKnown RBP25.16■■□□□ 1.62
COPE-202ENST00000349893 TXNDC2Q86VQ3 553 aa25.15■■□□□ 1.62
COPE-202ENST00000349893 KDM5AP29375 1690 aaKnown RBP25.13■■□□□ 1.61
COPE-202ENST00000349893 TMEM2Q9UHN6 1383 aa25.11■■□□□ 1.61
COPE-202ENST00000349893 PIK3C2BO00750 1634 aa25.11■■□□□ 1.61
COPE-202ENST00000349893 MYOM3Q5VTT5 1437 aa25.11■■□□□ 1.61
COPE-202ENST00000349893 EID1Q9Y6B2 187 aa25.1■■□□□ 1.61
COPE-202ENST00000349893 ERBINQ96RT1 1412 aa25.09■■□□□ 1.61
COPE-202ENST00000349893 MAP3K1Q13233 1512 aa25.07■■□□□ 1.6
COPE-202ENST00000349893 TMEM94Q12767 1356 aa25.06■■□□□ 1.6
COPE-202ENST00000349893 TET3O43151 1660 aa25.06■■□□□ 1.6
COPE-202ENST00000349893 VPS8Q8N3P4 1428 aa25.05■■□□□ 1.6
COPE-202ENST00000349893 ROBO1Q9Y6N7 1651 aa25.05■■□□□ 1.6
COPE-202ENST00000349893 POTEAQ6S8J7 498 aa25.05■■□□□ 1.6
COPE-202ENST00000349893 KIF15Q9NS87 1388 aa25.05■■□□□ 1.6
COPE-202ENST00000349893 CROCC2H7BZ55 1655 aa25.04■■□□□ 1.6
COPE-202ENST00000349893 EFCAB6Q5THR3 1501 aa25.03■■□□□ 1.6
COPE-202ENST00000349893 KCNA6P17658 529 aa25.02■■□□□ 1.6
COPE-202ENST00000349893 LMTK2Q8IWU2 1503 aa25.02■■□□□ 1.6
COPE-202ENST00000349893 NWD1Q149M9 1564 aa25.01■■□□□ 1.59
COPE-202ENST00000349893 KANK4Q5T7N3 995 aaPredicted RBP25■■□□□ 1.59
COPE-202ENST00000349893 NKTRP30414 1462 aaKnown RBP25■■□□□ 1.59
COPE-202ENST00000349893 ABCC5O15440 1437 aa24.99■■□□□ 1.59
COPE-202ENST00000349893 IDI1Q13907 227 aa24.96■■□□□ 1.59
COPE-202ENST00000349893 NOS1P29475 1434 aa24.95■■□□□ 1.58
COPE-202ENST00000349893 KANK1Q14678 1352 aa24.94■■□□□ 1.58
COPE-202ENST00000349893 ADGRB3O60242 1522 aa24.93■■□□□ 1.58
COPE-202ENST00000349893 PROSER2Q86WR7 435 aaPredicted RBP24.93■■□□□ 1.58
COPE-202ENST00000349893 RRP7BPQ9NSQ0 103 aa24.93■■□□□ 1.58
COPE-202ENST00000349893 STAG3Q9UJ98 1225 aa24.93■■□□□ 1.58
COPE-202ENST00000349893 SLC26A8Q96RN1 970 aa24.91■■□□□ 1.58
COPE-202ENST00000349893 PTPN23Q9H3S7 1636 aa24.9■■□□□ 1.58
COPE-202ENST00000349893 DAPK1P53355 1430 aa24.9■■□□□ 1.58
COPE-202ENST00000349893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.9■■□□□ 1.584e-6■■■□□ 15.1
COPE-202ENST00000349893 MSH6P52701 1360 aa24.89■■□□□ 1.57
COPE-202ENST00000349893 PHLPP1O60346 1717 aa24.89■■□□□ 1.57
COPE-202ENST00000349893 SETD1AO15047 1707 aaKnown RBP24.88■■□□□ 1.57
COPE-202ENST00000349893 JCADQ9P266 1359 aa24.88■■□□□ 1.57
COPE-202ENST00000349893 RBM33Q96EV2 1170 aaKnown RBP24.87■■□□□ 1.57
COPE-202ENST00000349893 SLAIN2Q9P270 581 aa24.86■■□□□ 1.57
COPE-202ENST00000349893 SLC52A1Q9NWF4 448 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms