RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
CTNNB1-201ENST00000349496 FMN1Q68DA7 1419 aa15.66■□□□□ 0.1
CTNNB1-201ENST00000349496 L3MBTL2Q969R5 705 aa15.66■□□□□ 0.1
CTNNB1-201ENST00000349496 SLKQ9H2G2 1235 aaPredicted RBP15.66■□□□□ 0.1
CTNNB1-201ENST00000349496 PTMSP20962 102 aa15.65■□□□□ 0.1
CTNNB1-201ENST00000349496 TMEM51Q9NW97 253 aa15.65■□□□□ 0.1
CTNNB1-201ENST00000349496 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
CTNNB1-201ENST00000349496 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
CTNNB1-201ENST00000349496 MAGI3Q5TCQ9 1506 aa15.65■□□□□ 0.1
CTNNB1-201ENST00000349496 PANK2Q9BZ23 570 aa15.64■□□□□ 0.09
CTNNB1-201ENST00000349496 NAIPQ13075 1403 aa15.63■□□□□ 0.09
CTNNB1-201ENST00000349496 MPHOSPH9Q99550 1183 aa15.63■□□□□ 0.09
CTNNB1-201ENST00000349496 ZNF771Q7L3S4 317 aaPredicted RBP15.61■□□□□ 0.09
CTNNB1-201ENST00000349496 HSP90B1P14625 803 aaKnown RBP15.61■□□□□ 0.09
CTNNB1-201ENST00000349496 MTERF4Q7Z6M4 381 aaKnown RBP15.61■□□□□ 0.09
CTNNB1-201ENST00000349496 HDAC5Q9UQL6 1122 aa15.61■□□□□ 0.09
CTNNB1-201ENST00000349496 FAM193AP78312 1265 aa15.6■□□□□ 0.09
CTNNB1-201ENST00000349496 MYOM3Q5VTT5 1437 aa15.6■□□□□ 0.09
CTNNB1-201ENST00000349496 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
CTNNB1-201ENST00000349496 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
CTNNB1-201ENST00000349496 TNNT3P45378 269 aaPredicted RBP15.6■□□□□ 0.09
CTNNB1-201ENST00000349496 NBPF8Q3BBV2 869 aa15.6■□□□□ 0.09
CTNNB1-201ENST00000349496 BACH2Q9BYV9 841 aa15.6■□□□□ 0.09
CTNNB1-201ENST00000349496 ZBTB22O15209 634 aa15.59■□□□□ 0.09
CTNNB1-201ENST00000349496 XRCC6P12956 609 aaKnown RBP eCLIP15.59■□□□□ 0.096e-9■□□□□ 9.9
CTNNB1-201ENST00000349496 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
CTNNB1-201ENST00000349496 MRS2Q9HD23 443 aa15.58■□□□□ 0.09
CTNNB1-201ENST00000349496 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.58■□□□□ 0.08
CTNNB1-201ENST00000349496 CBX1P83916 185 aa15.57■□□□□ 0.08
CTNNB1-201ENST00000349496 KDM2AQ9Y2K7 1162 aa15.57■□□□□ 0.08
CTNNB1-201ENST00000349496 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
CTNNB1-201ENST00000349496 KDM6BO15054 1643 aa15.57■□□□□ 0.08
CTNNB1-201ENST00000349496 DMTNQ08495 405 aa15.56■□□□□ 0.08
CTNNB1-201ENST00000349496 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
CTNNB1-201ENST00000349496 MAP3K1Q13233 1512 aa15.55■□□□□ 0.08
CTNNB1-201ENST00000349496 CFAP43Q8NDM7 1665 aa15.55■□□□□ 0.08
CTNNB1-201ENST00000349496 LRRIQ1Q96JM4 1722 aa15.55■□□□□ 0.08
CTNNB1-201ENST00000349496 UQCRHLA0A096LP55 91 aa15.55■□□□□ 0.08
CTNNB1-201ENST00000349496 UQCRHP07919 91 aa15.55■□□□□ 0.08
CTNNB1-201ENST00000349496 HFM1A2PYH4 1435 aa15.54■□□□□ 0.08
CTNNB1-201ENST00000349496 GRIN2BQ13224 1484 aa15.54■□□□□ 0.08
CTNNB1-201ENST00000349496 KIF20AO95235 890 aa15.54■□□□□ 0.08
CTNNB1-201ENST00000349496 TAF3Q5VWG9 929 aa15.54■□□□□ 0.08
CTNNB1-201ENST00000349496 UACAQ9BZF9 1416 aa15.53■□□□□ 0.08
CTNNB1-201ENST00000349496 KCNJ4P48050 445 aa15.53■□□□□ 0.08
CTNNB1-201ENST00000349496 CLGNO14967 610 aa15.52■□□□□ 0.08
CTNNB1-201ENST00000349496 IGSF3O75054 1194 aa15.52■□□□□ 0.07
CTNNB1-201ENST00000349496 RGS22Q8NE09 1264 aa15.52■□□□□ 0.07
CTNNB1-201ENST00000349496 CFDP1Q9UEE9 299 aaPredicted RBP15.52■□□□□ 0.07
CTNNB1-201ENST00000349496 PTMAP06454 111 aaKnown RBP15.52■□□□□ 0.07
CTNNB1-201ENST00000349496 BECN1Q14457 450 aa15.51■□□□□ 0.07
CTNNB1-201ENST00000349496 UTP14CQ5TAP6 766 aaKnown RBP15.51■□□□□ 0.07
CTNNB1-201ENST00000349496 PRG4Q92954 1404 aaPredicted RBP15.51■□□□□ 0.07
CTNNB1-201ENST00000349496 LETM1O95202 739 aaPredicted RBP15.51■□□□□ 0.07
CTNNB1-201ENST00000349496 MRE11P49959 708 aa15.51■□□□□ 0.07
CTNNB1-201ENST00000349496 EFCAB5A4FU69 1503 aa15.51■□□□□ 0.07
CTNNB1-201ENST00000349496 THOC2Q8NI27 1593 aaKnown RBP15.51■□□□□ 0.07
CTNNB1-201ENST00000349496 EIF4G2P78344 907 aaKnown RBP eCLIP15.5■□□□□ 0.07
CTNNB1-201ENST00000349496 PTPN23Q9H3S7 1636 aa15.5■□□□□ 0.07
CTNNB1-201ENST00000349496 LAMC3Q9Y6N6 1575 aa15.5■□□□□ 0.07
CTNNB1-201ENST00000349496 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
CTNNB1-201ENST00000349496 ZBTB9Q96C00 473 aa15.5■□□□□ 0.07
CTNNB1-201ENST00000349496 CTTNBP2Q8WZ74 1663 aa15.49■□□□□ 0.07
CTNNB1-201ENST00000349496 CC2D1BQ5T0F9 858 aaKnown RBP15.49■□□□□ 0.07
CTNNB1-201ENST00000349496 DENND4BO75064 1496 aaPredicted RBP15.49■□□□□ 0.07
CTNNB1-201ENST00000349496 EPRSP07814 1512 aaKnown RBP15.48■□□□□ 0.07
CTNNB1-201ENST00000349496 SPRYD3Q8NCJ5 442 aa15.48■□□□□ 0.07
CTNNB1-201ENST00000349496 SOX12O15370 315 aa15.47■□□□□ 0.07
CTNNB1-201ENST00000349496 MS4A1P11836 297 aa15.47■□□□□ 0.07
CTNNB1-201ENST00000349496 GTPBP4Q9BZE4 634 aaKnown RBP15.47■□□□□ 0.07
CTNNB1-201ENST00000349496 CUL7Q14999 1698 aa15.47■□□□□ 0.07
CTNNB1-201ENST00000349496 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
CTNNB1-201ENST00000349496 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.46■□□□□ 0.07
CTNNB1-201ENST00000349496 CHMP4CQ96CF2 233 aa15.46■□□□□ 0.07
CTNNB1-201ENST00000349496 CFAP44Q96MT7 982 aa15.46■□□□□ 0.07
CTNNB1-201ENST00000349496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.071e-7■■■■□ 25.3
CTNNB1-201ENST00000349496 HNRNPMP52272 730 aaKnown RBP eCLIP15.45■□□□□ 0.068e-8■■■□□ 18.5
CTNNB1-201ENST00000349496 PKD2Q13563 968 aa15.45■□□□□ 0.06
CTNNB1-201ENST00000349496 PLB1Q6P1J6 1458 aa15.45■□□□□ 0.06
CTNNB1-201ENST00000349496 KCNG1Q9UIX4 513 aa15.45■□□□□ 0.06
CTNNB1-201ENST00000349496 CCDC9Q9Y3X0 531 aaKnown RBP15.45■□□□□ 0.06
CTNNB1-201ENST00000349496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.44■□□□□ 0.06
CTNNB1-201ENST00000349496 RGL3Q3MIN7 710 aa15.44■□□□□ 0.06
CTNNB1-201ENST00000349496 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
CTNNB1-201ENST00000349496 DNAJC2Q99543 621 aaKnown RBP15.44■□□□□ 0.06
CTNNB1-201ENST00000349496 JPH4Q96JJ6 628 aa15.42■□□□□ 0.06
CTNNB1-201ENST00000349496 CCDC94Q9BW85 323 aaPredicted RBP15.42■□□□□ 0.06
CTNNB1-201ENST00000349496 GRPEL1Q9HAV7 217 aa15.42■□□□□ 0.06
CTNNB1-201ENST00000349496 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
CTNNB1-201ENST00000349496 ZNF526Q8TF50 670 aaPredicted RBP15.42■□□□□ 0.06
CTNNB1-201ENST00000349496 RIPK4P57078 832 aa15.41■□□□□ 0.06
CTNNB1-201ENST00000349496 SAMD9Q5K651 1589 aa15.41■□□□□ 0.06
CTNNB1-201ENST00000349496 TARBP1Q13395 1621 aaKnown RBP15.41■□□□□ 0.06
CTNNB1-201ENST00000349496 UGGT2Q9NYU1 1516 aa15.41■□□□□ 0.06
CTNNB1-201ENST00000349496 EXOC6Q8TAG9 804 aa15.4■□□□□ 0.06
CTNNB1-201ENST00000349496 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
CTNNB1-201ENST00000349496 TRIM6-TRIM34B2RNG4 842 aa15.4■□□□□ 0.06
CTNNB1-201ENST00000349496 TRIM34Q9BYJ4 488 aa15.4■□□□□ 0.06
CTNNB1-201ENST00000349496 SKAP1Q86WV1 359 aa15.39■□□□□ 0.05
CTNNB1-201ENST00000349496 TRERF1Q96PN7 1200 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms