RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 BCANQ96GW7 911 aa19.61■□□□□ 0.73
LIPA-202ENST00000336233 ZCCHC11Q5TAX3 1644 aaKnown RBP19.6■□□□□ 0.73
LIPA-202ENST00000336233 DUOX2Q9NRD8 1548 aa19.59■□□□□ 0.73
LIPA-202ENST00000336233 MRS2Q9HD23 443 aa19.59■□□□□ 0.73
LIPA-202ENST00000336233 TRPM1Q7Z4N2 1603 aa19.59■□□□□ 0.73
LIPA-202ENST00000336233 ZBED9Q6R2W3 1325 aa19.59■□□□□ 0.73
LIPA-202ENST00000336233 LAMC1P11047 1609 aa19.58■□□□□ 0.73
LIPA-202ENST00000336233 E9PCH4 1651 aa19.58■□□□□ 0.73
LIPA-202ENST00000336233 ERBINQ96RT1 1412 aa19.56■□□□□ 0.72
LIPA-202ENST00000336233 ATP10AO60312 1499 aa19.56■□□□□ 0.72
LIPA-202ENST00000336233 PLCH2O75038 1416 aa19.56■□□□□ 0.72
LIPA-202ENST00000336233 ZNF326Q5BKZ1 582 aaKnown RBP19.56■□□□□ 0.72
LIPA-202ENST00000336233 ERICH6BQ5W0A0 696 aa19.55■□□□□ 0.72
LIPA-202ENST00000336233 PLA2R1Q13018 1463 aa19.55■□□□□ 0.72
LIPA-202ENST00000336233 ABCC1P33527 1531 aa19.55■□□□□ 0.72
LIPA-202ENST00000336233 CCDC144AA2RUR9 1427 aa19.55■□□□□ 0.72
LIPA-202ENST00000336233 PRAG1Q86YV5 1406 aa19.55■□□□□ 0.72
LIPA-202ENST00000336233 CARD11Q9BXL7 1154 aa19.54■□□□□ 0.72
LIPA-202ENST00000336233 ARAP3Q8WWN8 1544 aa19.54■□□□□ 0.72
LIPA-202ENST00000336233 GPRASP1Q5JY77 1395 aa19.51■□□□□ 0.71
LIPA-202ENST00000336233 EIF2AK4Q9P2K8 1649 aaKnown RBP19.51■□□□□ 0.71
LIPA-202ENST00000336233 KTN1Q86UP2 1357 aaKnown RBP19.5■□□□□ 0.71
LIPA-202ENST00000336233 FAM9BQ8IZU0 186 aa19.5■□□□□ 0.71
LIPA-202ENST00000336233 DCAF11Q8TEB1 546 aa19.49■□□□□ 0.71
LIPA-202ENST00000336233 A2MP01023 1474 aa19.49■□□□□ 0.71
LIPA-202ENST00000336233 PRDM15P57071 1507 aaPredicted RBP19.48■□□□□ 0.71
LIPA-202ENST00000336233 ST20-MTHFSA0A0A6YYL1 179 aa19.44■□□□□ 0.7
LIPA-202ENST00000336233 EFCAB2Q5VUJ9 269 aa19.44■□□□□ 0.7
LIPA-202ENST00000336233 KDM2AQ9Y2K7 1162 aa19.44■□□□□ 0.7
LIPA-202ENST00000336233 RTEL1-TNFRSF6BF6WH68 1400 aa19.44■□□□□ 0.7
LIPA-202ENST00000336233 RNF17Q9BXT8 1623 aaKnown RBP19.44■□□□□ 0.7
LIPA-202ENST00000336233 SMG6Q86US8 1419 aaKnown RBP19.44■□□□□ 0.7
LIPA-202ENST00000336233 ZFYVE16Q7Z3T8 1539 aa19.42■□□□□ 0.7
LIPA-202ENST00000336233 DEPDC5O75140 1603 aa19.42■□□□□ 0.7
LIPA-202ENST00000336233 ANP32EQ9BTT0 268 aa19.41■□□□□ 0.7
LIPA-202ENST00000336233 TRAPPC8Q9Y2L5 1435 aa19.41■□□□□ 0.7
LIPA-202ENST00000336233 COL17A1Q9UMD9 1497 aaPredicted RBP19.41■□□□□ 0.7
LIPA-202ENST00000336233 BRD4O60885 1362 aaPredicted RBP19.4■□□□□ 0.7
LIPA-202ENST00000336233 LRPPRCP42704 1394 aaKnown RBP19.39■□□□□ 0.69
LIPA-202ENST00000336233 ABCA9Q8IUA7 1624 aa19.39■□□□□ 0.69
LIPA-202ENST00000336233 RALBP1Q15311 655 aa19.38■□□□□ 0.69
LIPA-202ENST00000336233 POLR3GLQ9BT43 218 aa19.38■□□□□ 0.69
LIPA-202ENST00000336233 PNISRQ8TF01 805 aaKnown RBP19.38■□□□□ 0.69
LIPA-202ENST00000336233 TRPM2O94759 1503 aa19.37■□□□□ 0.69
LIPA-202ENST00000336233 PPP4R2Q9NY27 417 aa19.37■□□□□ 0.69
LIPA-202ENST00000336233 INO80Q9ULG1 1556 aaPredicted RBP19.37■□□□□ 0.69
LIPA-202ENST00000336233 MYBBP1AQ9BQG0 1328 aaKnown RBP19.36■□□□□ 0.69
LIPA-202ENST00000336233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.69
LIPA-202ENST00000336233 CEP152O94986 1710 aa19.35■□□□□ 0.69
LIPA-202ENST00000336233 WDR7Q9Y4E6 1490 aa19.35■□□□□ 0.69
LIPA-202ENST00000336233 MADDQ8WXG6 1647 aa19.34■□□□□ 0.69
LIPA-202ENST00000336233 PARD3Q8TEW0 1356 aa19.34■□□□□ 0.69
LIPA-202ENST00000336233 VWDEQ8N2E2 1590 aa19.34■□□□□ 0.69
LIPA-202ENST00000336233 TET3O43151 1660 aa19.34■□□□□ 0.69
LIPA-202ENST00000336233 SPHKAPQ2M3C7 1700 aa19.34■□□□□ 0.69
LIPA-202ENST00000336233 PTPRTO14522 1441 aa19.33■□□□□ 0.68
LIPA-202ENST00000336233 IRX6P78412 446 aaPredicted RBP19.32■□□□□ 0.68
LIPA-202ENST00000336233 NEURL4Q96JN8 1562 aa19.32■□□□□ 0.68
LIPA-202ENST00000336233 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
LIPA-202ENST00000336233 NBPF1Q3BBV0 1214 aa19.32■□□□□ 0.68
LIPA-202ENST00000336233 NUDCQ9Y266 331 aa19.32■□□□□ 0.68
LIPA-202ENST00000336233 RBM19Q9Y4C8 960 aaKnown RBP19.32■□□□□ 0.68
LIPA-202ENST00000336233 IQGAP1P46940 1657 aa19.31■□□□□ 0.68
LIPA-202ENST00000336233 TMC1Q8TDI8 760 aa19.31■□□□□ 0.68
LIPA-202ENST00000336233 SPAG9O60271 1321 aaKnown RBP19.31■□□□□ 0.68
LIPA-202ENST00000336233 ATP7AQ04656 1500 aa19.31■□□□□ 0.68
LIPA-202ENST00000336233 WASHC2CQ9Y4E1 1318 aa19.3■□□□□ 0.68
LIPA-202ENST00000336233 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
LIPA-202ENST00000336233 TESK2Q96S53 571 aa19.3■□□□□ 0.68
LIPA-202ENST00000336233 ZMYM4Q5VZL5 1548 aa19.29■□□□□ 0.68
LIPA-202ENST00000336233 INSRP06213 1382 aa19.28■□□□□ 0.68
LIPA-202ENST00000336233 CLTCL1P53675 1640 aa19.28■□□□□ 0.68
LIPA-202ENST00000336233 DISP3Q9P2K9 1392 aa19.27■□□□□ 0.68
LIPA-202ENST00000336233 STAC3Q96MF2 364 aa19.27■□□□□ 0.68
LIPA-202ENST00000336233 FANCAO15360 1455 aa19.27■□□□□ 0.67
LIPA-202ENST00000336233 PER1O15534 1290 aaPredicted RBP19.27■□□□□ 0.67
LIPA-202ENST00000336233 SCAPERQ9BY12 1400 aa19.25■□□□□ 0.67
LIPA-202ENST00000336233 NLRP13Q86W25 1043 aa19.25■□□□□ 0.67
LIPA-202ENST00000336233 KIAA1210Q9ULL0 1709 aa19.25■□□□□ 0.67
LIPA-202ENST00000336233 MROH1Q8NDA8 1641 aa19.24■□□□□ 0.67
LIPA-202ENST00000336233 TMF1P82094 1093 aa19.21■□□□□ 0.67
LIPA-202ENST00000336233 AFAP1Q8N556 730 aa19.21■□□□□ 0.67
LIPA-202ENST00000336233 CNGB1Q14028 1251 aaPredicted RBP19.21■□□□□ 0.67
LIPA-202ENST00000336233 ADGRL1O94910 1474 aa19.2■□□□□ 0.66
LIPA-202ENST00000336233 KANK1Q14678 1352 aa19.2■□□□□ 0.66
LIPA-202ENST00000336233 SYNMO15061 1565 aa19.18■□□□□ 0.66
LIPA-202ENST00000336233 SCAF11Q99590 1463 aaKnown RBP19.18■□□□□ 0.66
LIPA-202ENST00000336233 BLMP54132 1417 aaPredicted RBP19.17■□□□□ 0.66
LIPA-202ENST00000336233 ASXL2Q76L83 1435 aa19.17■□□□□ 0.66
LIPA-202ENST00000336233 LMTK2Q8IWU2 1503 aa19.16■□□□□ 0.66
LIPA-202ENST00000336233 MYOM2P54296 1465 aa19.16■□□□□ 0.66
LIPA-202ENST00000336233 FANCIQ9NVI1 1328 aa19.16■□□□□ 0.66
LIPA-202ENST00000336233 EFCAB6Q5THR3 1501 aa19.16■□□□□ 0.66
LIPA-202ENST00000336233 KIDINS220Q9ULH0 1771 aa19.16■□□□□ 0.66
LIPA-202ENST00000336233 IFT172Q9UG01 1749 aa19.15■□□□□ 0.66
LIPA-202ENST00000336233 PDE3BQ13370 1112 aa19.14■□□□□ 0.65
LIPA-202ENST00000336233 CFAP74Q9C0B2 1584 aa19.14■□□□□ 0.65
LIPA-202ENST00000336233 PANK3Q9H999 370 aa19.14■□□□□ 0.65
LIPA-202ENST00000336233 B4GALNT3Q6L9W6 998 aa19.13■□□□□ 0.65
LIPA-202ENST00000336233 MAP3K4Q9Y6R4 1608 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms