RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 A2ML1A8K2U0 1454 aa38.74■■■■□ 3.79
CDKN3-202ENST00000335183 TCOF1Q13428 1488 aaKnown RBP38.74■■■■□ 3.79
CDKN3-202ENST00000335183 DNMT1P26358 1616 aaKnown RBP38.74■■■■□ 3.79
CDKN3-202ENST00000335183 ZNF335Q9H4Z2 1342 aaPredicted RBP38.72■■■■□ 3.79
CDKN3-202ENST00000335183 TSPY4P0CV99 314 aa38.71■■■■□ 3.79
CDKN3-202ENST00000335183 TSPY10P0CW01 314 aa38.71■■■■□ 3.79
CDKN3-202ENST00000335183 FAM135AQ9P2D6 1515 aa38.7■■■■□ 3.79
CDKN3-202ENST00000335183 WASHC2CQ9Y4E1 1318 aa38.68■■■■□ 3.78
CDKN3-202ENST00000335183 FBXO31Q5XUX0 539 aaPredicted RBP38.68■■■■□ 3.78
CDKN3-202ENST00000335183 TNRQ92752 1358 aa38.68■■■■□ 3.78
CDKN3-202ENST00000335183 PZPP20742 1482 aa38.67■■■■□ 3.78
CDKN3-202ENST00000335183 POLR1AO95602 1720 aaPredicted RBP38.64■■■■□ 3.78
CDKN3-202ENST00000335183 DISP3Q9P2K9 1392 aa38.61■■■■□ 3.77
CDKN3-202ENST00000335183 KANK4Q5T7N3 995 aaPredicted RBP38.6■■■■□ 3.77
CDKN3-202ENST00000335183 MAST1Q9Y2H9 1570 aa38.6■■■■□ 3.77
CDKN3-202ENST00000335183 MAP3K1Q13233 1512 aa38.58■■■■□ 3.77
CDKN3-202ENST00000335183 RNF17Q9BXT8 1623 aaKnown RBP38.55■■■■□ 3.76
CDKN3-202ENST00000335183 MYOM3Q5VTT5 1437 aa38.54■■■■□ 3.76
CDKN3-202ENST00000335183 NEURL4Q96JN8 1562 aa38.52■■■■□ 3.76
CDKN3-202ENST00000335183 UBAP1LF5GYI3 381 aa38.51■■■■□ 3.76
CDKN3-202ENST00000335183 MIA2Q96PC5 1412 aa38.51■■■■□ 3.76
CDKN3-202ENST00000335183 ZC3H13Q5T200 1668 aaKnown RBP38.51■■■■□ 3.76
CDKN3-202ENST00000335183 EIF2AK4Q9P2K8 1649 aaKnown RBP38.5■■■■□ 3.75
CDKN3-202ENST00000335183 SPATA31D1Q6ZQQ2 1576 aa38.48■■■■□ 3.75
CDKN3-202ENST00000335183 NLRP1Q9C000 1473 aa38.47■■■■□ 3.75
CDKN3-202ENST00000335183 UGGT1Q9NYU2 1555 aa38.47■■■■□ 3.75
CDKN3-202ENST00000335183 ABCC3O15438 1527 aa38.47■■■■□ 3.75
CDKN3-202ENST00000335183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.46■■■■□ 3.75
CDKN3-202ENST00000335183 CEP152O94986 1710 aa38.43■■■■□ 3.74
CDKN3-202ENST00000335183 THEMISQ8N1K5 641 aaPredicted RBP38.43■■■■□ 3.74
CDKN3-202ENST00000335183 CFAP65Q6ZU64 1925 aaKnown RBP38.42■■■■□ 3.74
CDKN3-202ENST00000335183 ANKLE2Q86XL3 938 aa38.42■■■■□ 3.74
CDKN3-202ENST00000335183 MROH1Q8NDA8 1641 aa38.4■■■■□ 3.74
CDKN3-202ENST00000335183 ILDR2Q71H61 639 aa38.39■■■■□ 3.74
CDKN3-202ENST00000335183 DUOX2Q9NRD8 1548 aa38.38■■■■□ 3.73
CDKN3-202ENST00000335183 CROCC2H7BZ55 1655 aa38.36■■■■□ 3.73
CDKN3-202ENST00000335183 CPS1P31327 1500 aa38.36■■■■□ 3.73
CDKN3-202ENST00000335183 SHANK2Q9UPX8 1470 aa38.35■■■■□ 3.73
CDKN3-202ENST00000335183 DEPDC5O75140 1603 aa38.34■■■■□ 3.73
CDKN3-202ENST00000335183 APLP2Q06481 763 aa38.34■■■■□ 3.73
CDKN3-202ENST00000335183 ERVK-7P63135 1459 aa38.34■■■■□ 3.73
CDKN3-202ENST00000335183 PTPN23Q9H3S7 1636 aa38.34■■■■□ 3.73
CDKN3-202ENST00000335183 NPHP4O75161 1426 aaPredicted RBP38.32■■■■□ 3.73
CDKN3-202ENST00000335183 IQGAP1P46940 1657 aa38.3■■■■□ 3.72
CDKN3-202ENST00000335183 VWDEQ8N2E2 1590 aa38.29■■■■□ 3.72
CDKN3-202ENST00000335183 MED14O60244 1454 aa38.28■■■■□ 3.72
CDKN3-202ENST00000335183 KIF15Q9NS87 1388 aa38.28■■■■□ 3.72
CDKN3-202ENST00000335183 SCAF1Q9H7N4 1312 aaKnown RBP38.26■■■■□ 3.72
CDKN3-202ENST00000335183 ABCC5O15440 1437 aa38.26■■■■□ 3.72
CDKN3-202ENST00000335183 RRP7BPQ9NSQ0 103 aa38.23■■■■□ 3.71
CDKN3-202ENST00000335183 UBR1Q8IWV7 1749 aa38.23■■■■□ 3.71
CDKN3-202ENST00000335183 PRDM15P57071 1507 aaPredicted RBP38.22■■■■□ 3.71
CDKN3-202ENST00000335183 ERBINQ96RT1 1412 aa38.21■■■■□ 3.71
CDKN3-202ENST00000335183 PIP4K2BP78356 416 aa38.21■■■■□ 3.71
CDKN3-202ENST00000335183 DAPK1P53355 1430 aa38.2■■■■□ 3.71
CDKN3-202ENST00000335183 TOM1O60784 492 aa38.19■■■■□ 3.7
CDKN3-202ENST00000335183 FGD6Q6ZV73 1430 aa38.16■■■■□ 3.7
CDKN3-202ENST00000335183 SOCS7O14512 581 aa38.15■■■■□ 3.7
CDKN3-202ENST00000335183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.15■■■■□ 3.7
CDKN3-202ENST00000335183 STRCP1A6NGW2 1772 aa38.15■■■■□ 3.7
CDKN3-202ENST00000335183 ARHGAP31Q2M1Z3 1444 aa38.12■■■■□ 3.69
CDKN3-202ENST00000335183 HSPA1LP34931 641 aa38.09■■■■□ 3.69
CDKN3-202ENST00000335183 CHIC2Q9UKJ5 165 aa38.09■■■■□ 3.69
CDKN3-202ENST00000335183 KANK1Q14678 1352 aa38.07■■■■□ 3.69
CDKN3-202ENST00000335183 SCAF11Q99590 1463 aaKnown RBP38.07■■■■□ 3.68
CDKN3-202ENST00000335183 ANKRD30AQ9BXX3 1397 aa38.05■■■■□ 3.68
CDKN3-202ENST00000335183 SYNMO15061 1565 aa38.04■■■■□ 3.68
CDKN3-202ENST00000335183 PIK3C2BO00750 1634 aa38.04■■■■□ 3.68
CDKN3-202ENST00000335183 SLIT1O75093 1534 aa38.02■■■■□ 3.68
CDKN3-202ENST00000335183 ARHGAP23Q9P227 1491 aa38.02■■■■□ 3.68
CDKN3-202ENST00000335183 LRRC7Q96NW7 1537 aa38.02■■■■□ 3.68
CDKN3-202ENST00000335183 ALKQ9UM73 1620 aa38.01■■■■□ 3.67
CDKN3-202ENST00000335183 TXNDC2Q86VQ3 553 aa38■■■■□ 3.67
CDKN3-202ENST00000335183 LTKP29376 864 aa37.99■■■■□ 3.67
CDKN3-202ENST00000335183 STAG3Q9UJ98 1225 aa37.96■■■■□ 3.67
CDKN3-202ENST00000335183 EID1Q9Y6B2 187 aa37.95■■■■□ 3.67
CDKN3-202ENST00000335183 LMTK2Q8IWU2 1503 aa37.95■■■■□ 3.67
CDKN3-202ENST00000335183 MED1Q15648 1581 aaPredicted RBP37.94■■■■□ 3.66
CDKN3-202ENST00000335183 FAM50AQ14320 339 aaKnown RBP37.9■■■■□ 3.66
CDKN3-202ENST00000335183 KDM5AP29375 1690 aaKnown RBP37.89■■■■□ 3.66
CDKN3-202ENST00000335183 EFCAB6Q5THR3 1501 aa37.88■■■■□ 3.65
CDKN3-202ENST00000335183 TMEM2Q9UHN6 1383 aa37.88■■■■□ 3.65
CDKN3-202ENST00000335183 ADGRL2O95490 1459 aa37.88■■■■□ 3.65
CDKN3-202ENST00000335183 SENP3Q9H4L4 574 aaPredicted RBP37.87■■■■□ 3.65
CDKN3-202ENST00000335183 XIRP1Q702N8 1843 aaKnown RBP37.86■■■■□ 3.65
CDKN3-202ENST00000335183 IDI1Q13907 227 aa37.85■■■■□ 3.65
CDKN3-202ENST00000335183 NOS1P29475 1434 aa37.78■■■■□ 3.64
CDKN3-202ENST00000335183 ANKRD50Q9ULJ7 1429 aa37.77■■■■□ 3.64
CDKN3-202ENST00000335183 ADGRB3O60242 1522 aa37.77■■■■□ 3.64
CDKN3-202ENST00000335183 MYO5BQ9ULV0 1848 aa37.71■■■■□ 3.63
CDKN3-202ENST00000335183 TET3O43151 1660 aa37.7■■■■□ 3.63
CDKN3-202ENST00000335183 SLC26A8Q96RN1 970 aa37.69■■■■□ 3.62
CDKN3-202ENST00000335183 PHF23Q9BUL5 403 aaPredicted RBP37.69■■■■□ 3.62
CDKN3-202ENST00000335183 SLC52A1Q9NWF4 448 aa37.69■■■■□ 3.62
CDKN3-202ENST00000335183 RPRD2Q5VT52 1461 aaKnown RBP37.68■■■■□ 3.62
CDKN3-202ENST00000335183 GCC2Q8IWJ2 1684 aa37.66■■■■□ 3.62
CDKN3-202ENST00000335183 KCNA6P17658 529 aa37.64■■■■□ 3.62
CDKN3-202ENST00000335183 BCANQ96GW7 911 aa37.64■■■■□ 3.62
CDKN3-202ENST00000335183 TMEM94Q12767 1356 aa37.63■■■■□ 3.61
CDKN3-202ENST00000335183 UNC13BO14795 1591 aa37.62■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms