RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 TRAPPC8Q9Y2L5 1435 aa29.6■■■□□ 2.33
LIMS2-201ENST00000324938 WDR7Q9Y4E6 1490 aa29.58■■■□□ 2.33
LIMS2-201ENST00000324938 ATP10AO60312 1499 aa29.58■■■□□ 2.33
LIMS2-201ENST00000324938 DCAF11Q8TEB1 546 aa29.57■■■□□ 2.32
LIMS2-201ENST00000324938 ABCA9Q8IUA7 1624 aa29.57■■■□□ 2.32
LIMS2-201ENST00000324938 CARD11Q9BXL7 1154 aa29.57■■■□□ 2.32
LIMS2-201ENST00000324938 ZFYVE16Q7Z3T8 1539 aa29.56■■■□□ 2.32
LIMS2-201ENST00000324938 HNRNPUQ00839 825 aaKnown RBP eCLIP29.56■■■□□ 2.32
LIMS2-201ENST00000324938 DHX29Q7Z478 1369 aaKnown RBP29.55■■■□□ 2.32
LIMS2-201ENST00000324938 PRAG1Q86YV5 1406 aa29.55■■■□□ 2.32
LIMS2-201ENST00000324938 RTEL1-TNFRSF6BF6WH68 1400 aa29.54■■■□□ 2.32
LIMS2-201ENST00000324938 CCDC184Q52MB2 194 aa29.54■■■□□ 2.32
LIMS2-201ENST00000324938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.54■■■□□ 2.32
LIMS2-201ENST00000324938 KDM2AQ9Y2K7 1162 aa29.54■■■□□ 2.32
LIMS2-201ENST00000324938 ROCK2O75116 1388 aaKnown RBP29.53■■■□□ 2.32
LIMS2-201ENST00000324938 LAMC1P11047 1609 aa29.52■■■□□ 2.32
LIMS2-201ENST00000324938 A2MP01023 1474 aa29.52■■■□□ 2.32
LIMS2-201ENST00000324938 FKBP8Q14318 412 aa29.5■■■□□ 2.31
LIMS2-201ENST00000324938 E9PCH4 1651 aa29.49■■■□□ 2.31
LIMS2-201ENST00000324938 DEPDC5O75140 1603 aa29.48■■■□□ 2.31
LIMS2-201ENST00000324938 EIF2AK4Q9P2K8 1649 aaKnown RBP29.48■■■□□ 2.31
LIMS2-201ENST00000324938 INO80Q9ULG1 1556 aaPredicted RBP29.48■■■□□ 2.31
LIMS2-201ENST00000324938 NEFLP07196 543 aa29.47■■■□□ 2.31
LIMS2-201ENST00000324938 MRS2Q9HD23 443 aa29.47■■■□□ 2.31
LIMS2-201ENST00000324938 SPAG9O60271 1321 aaKnown RBP29.46■■■□□ 2.31
LIMS2-201ENST00000324938 FANCAO15360 1455 aa29.44■■■□□ 2.3
LIMS2-201ENST00000324938 GPRASP1Q5JY77 1395 aa29.43■■■□□ 2.3
LIMS2-201ENST00000324938 ATP7AQ04656 1500 aa29.42■■■□□ 2.3
LIMS2-201ENST00000324938 ST20-MTHFSA0A0A6YYL1 179 aa29.42■■■□□ 2.3
LIMS2-201ENST00000324938 PRDM15P57071 1507 aaPredicted RBP29.41■■■□□ 2.3
LIMS2-201ENST00000324938 POLR3GLQ9BT43 218 aa29.4■■■□□ 2.3
LIMS2-201ENST00000324938 SPHKAPQ2M3C7 1700 aa29.39■■■□□ 2.3
LIMS2-201ENST00000324938 TET3O43151 1660 aa29.38■■■□□ 2.29
LIMS2-201ENST00000324938 AFAP1Q8N556 730 aa29.38■■■□□ 2.29
LIMS2-201ENST00000324938 CEP152O94986 1710 aa29.37■■■□□ 2.29
LIMS2-201ENST00000324938 RNF17Q9BXT8 1623 aaKnown RBP29.37■■■□□ 2.29
LIMS2-201ENST00000324938 RGL3Q3MIN7 710 aa29.37■■■□□ 2.29
LIMS2-201ENST00000324938 TRPM2O94759 1503 aa29.37■■■□□ 2.29
LIMS2-201ENST00000324938 FAM9BQ8IZU0 186 aa29.36■■■□□ 2.29
LIMS2-201ENST00000324938 ASXL2Q76L83 1435 aa29.35■■■□□ 2.29
LIMS2-201ENST00000324938 ADGRL1O94910 1474 aa29.34■■■□□ 2.29
LIMS2-201ENST00000324938 VWDEQ8N2E2 1590 aa29.34■■■□□ 2.29
LIMS2-201ENST00000324938 BCANQ96GW7 911 aa29.33■■■□□ 2.29
LIMS2-201ENST00000324938 ZBED9Q6R2W3 1325 aa29.32■■■□□ 2.28
LIMS2-201ENST00000324938 NBPF1Q3BBV0 1214 aa29.29■■■□□ 2.28
LIMS2-201ENST00000324938 PTPRTO14522 1441 aa29.28■■■□□ 2.28
LIMS2-201ENST00000324938 MADDQ8WXG6 1647 aa29.28■■■□□ 2.28
LIMS2-201ENST00000324938 SCAPERQ9BY12 1400 aa29.28■■■□□ 2.28
LIMS2-201ENST00000324938 CLTCL1P53675 1640 aa29.27■■■□□ 2.28
LIMS2-201ENST00000324938 COL17A1Q9UMD9 1497 aaPredicted RBP29.27■■■□□ 2.28
LIMS2-201ENST00000324938 KTN1Q86UP2 1357 aaKnown RBP29.26■■■□□ 2.28
LIMS2-201ENST00000324938 MROH1Q8NDA8 1641 aa29.25■■■□□ 2.27
LIMS2-201ENST00000324938 KIDINS220Q9ULH0 1771 aa29.24■■■□□ 2.27
LIMS2-201ENST00000324938 KANK1Q14678 1352 aa29.22■■■□□ 2.27
LIMS2-201ENST00000324938 CFAP74Q9C0B2 1584 aa29.22■■■□□ 2.27
LIMS2-201ENST00000324938 IQGAP1P46940 1657 aa29.21■■■□□ 2.27
LIMS2-201ENST00000324938 NEURL4Q96JN8 1562 aa29.2■■■□□ 2.26
LIMS2-201ENST00000324938 OSCARQ8IYS5 282 aa29.17■■■□□ 2.26
LIMS2-201ENST00000324938 TESK2Q96S53 571 aa29.17■■■□□ 2.26
LIMS2-201ENST00000324938 ZNF518AQ6AHZ1 1483 aa29.16■■■□□ 2.26
LIMS2-201ENST00000324938 TSHZ2Q9NRE2 1034 aa29.16■■■□□ 2.26
LIMS2-201ENST00000324938 CNGB1Q14028 1251 aaPredicted RBP29.15■■■□□ 2.26
LIMS2-201ENST00000324938 RALBP1Q15311 655 aa29.15■■■□□ 2.26
LIMS2-201ENST00000324938 BRD4O60885 1362 aaPredicted RBP29.14■■■□□ 2.26
LIMS2-201ENST00000324938 MYBBP1AQ9BQG0 1328 aaKnown RBP29.14■■■□□ 2.26
LIMS2-201ENST00000324938 DISP3Q9P2K9 1392 aa29.14■■■□□ 2.25
LIMS2-201ENST00000324938 STAC3Q96MF2 364 aa29.13■■■□□ 2.25
LIMS2-201ENST00000324938 EFCAB6Q5THR3 1501 aa29.13■■■□□ 2.25
LIMS2-201ENST00000324938 KIAA1210Q9ULL0 1709 aa29.12■■■□□ 2.25
LIMS2-201ENST00000324938 KIF3BO15066 747 aa29.12■■■□□ 2.25
LIMS2-201ENST00000324938 PNISRQ8TF01 805 aaKnown RBP29.11■■■□□ 2.25
LIMS2-201ENST00000324938 NPM1P06748 294 aaKnown RBP eCLIP29.1■■■□□ 2.25
LIMS2-201ENST00000324938 KIF1BO60333 1816 aa29.1■■■□□ 2.25
LIMS2-201ENST00000324938 TMC1Q8TDI8 760 aa29.09■■■□□ 2.25
LIMS2-201ENST00000324938 MYT1LQ9UL68 1186 aa29.09■■■□□ 2.25
LIMS2-201ENST00000324938 PARD3Q8TEW0 1356 aa29.09■■■□□ 2.25
LIMS2-201ENST00000324938 ERICH6BQ5W0A0 696 aa29.08■■■□□ 2.25
LIMS2-201ENST00000324938 LRPPRCP42704 1394 aaKnown RBP29.08■■■□□ 2.25
LIMS2-201ENST00000324938 LMTK2Q8IWU2 1503 aa29.08■■■□□ 2.25
LIMS2-201ENST00000324938 PPRC1Q5VV67 1664 aaKnown RBP29.08■■■□□ 2.25
LIMS2-201ENST00000324938 SMG6Q86US8 1419 aaKnown RBP29.06■■■□□ 2.24
LIMS2-201ENST00000324938 IFT172Q9UG01 1749 aa29.05■■■□□ 2.24
LIMS2-201ENST00000324938 TMF1P82094 1093 aa29.05■■■□□ 2.24
LIMS2-201ENST00000324938 CD109Q6YHK3 1445 aa29.05■■■□□ 2.24
LIMS2-201ENST00000324938 POGZQ7Z3K3 1410 aa29.05■■■□□ 2.24
LIMS2-201ENST00000324938 PER1O15534 1290 aaPredicted RBP29.05■■■□□ 2.24
LIMS2-201ENST00000324938 HECW2Q9P2P5 1572 aa29.04■■■□□ 2.24
LIMS2-201ENST00000324938 WASHC2CQ9Y4E1 1318 aa29.04■■■□□ 2.24
LIMS2-201ENST00000324938 SCAF11Q99590 1463 aaKnown RBP29.02■■■□□ 2.24
LIMS2-201ENST00000324938 MAP3K4Q9Y6R4 1608 aa29.01■■■□□ 2.24
LIMS2-201ENST00000324938 MLH3Q9UHC1 1453 aa29.01■■■□□ 2.24
LIMS2-201ENST00000324938 MYOM2P54296 1465 aa29.01■■■□□ 2.23
LIMS2-201ENST00000324938 UGGT1Q9NYU2 1555 aa29■■■□□ 2.23
LIMS2-201ENST00000324938 IRX6P78412 446 aaPredicted RBP29■■■□□ 2.23
LIMS2-201ENST00000324938 FRMPD1Q5SYB0 1578 aa29■■■□□ 2.23
LIMS2-201ENST00000324938 MROH2AA6NES4 1674 aa28.99■■■□□ 2.23
LIMS2-201ENST00000324938 NLRP13Q86W25 1043 aa28.98■■■□□ 2.23
LIMS2-201ENST00000324938 ABCA6Q8N139 1617 aa28.97■■■□□ 2.23
LIMS2-201ENST00000324938 SYNMO15061 1565 aa28.94■■■□□ 2.22
LIMS2-201ENST00000324938 NUDCQ9Y266 331 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms