RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 PLCH2O75038 1416 aa19.11■□□□□ 0.65
ATG4C-201ENST00000317868 FKBP8Q14318 412 aa19.11■□□□□ 0.65
ATG4C-201ENST00000317868 ERBINQ96RT1 1412 aa19.1■□□□□ 0.65
ATG4C-201ENST00000317868 DEPDC5O75140 1603 aa19.08■□□□□ 0.64
ATG4C-201ENST00000317868 RNF17Q9BXT8 1623 aaKnown RBP19.07■□□□□ 0.64
ATG4C-201ENST00000317868 PRAG1Q86YV5 1406 aa19.07■□□□□ 0.64
ATG4C-201ENST00000317868 HNRNPUQ00839 825 aaKnown RBP eCLIP19.06■□□□□ 0.64
ATG4C-201ENST00000317868 EIF2AK4Q9P2K8 1649 aaKnown RBP19.06■□□□□ 0.64
ATG4C-201ENST00000317868 ROCK2O75116 1388 aaKnown RBP19.06■□□□□ 0.64
ATG4C-201ENST00000317868 ABCA9Q8IUA7 1624 aa19.05■□□□□ 0.64
ATG4C-201ENST00000317868 PRDM15P57071 1507 aaPredicted RBP19.05■□□□□ 0.64
ATG4C-201ENST00000317868 TSHZ2Q9NRE2 1034 aa19.05■□□□□ 0.64
ATG4C-201ENST00000317868 A2MP01023 1474 aa19.04■□□□□ 0.64
ATG4C-201ENST00000317868 ZFYVE16Q7Z3T8 1539 aa19.03■□□□□ 0.64
ATG4C-201ENST00000317868 GPRASP1Q5JY77 1395 aa19.03■□□□□ 0.64
ATG4C-201ENST00000317868 CEP152O94986 1710 aa19.03■□□□□ 0.64
ATG4C-201ENST00000317868 CCDC144AA2RUR9 1427 aa19.02■□□□□ 0.64
ATG4C-201ENST00000317868 INO80Q9ULG1 1556 aaPredicted RBP19.01■□□□□ 0.63
ATG4C-201ENST00000317868 ZBED9Q6R2W3 1325 aa19.01■□□□□ 0.63
ATG4C-201ENST00000317868 NEFLP07196 543 aa19.01■□□□□ 0.63
ATG4C-201ENST00000317868 SPHKAPQ2M3C7 1700 aa19■□□□□ 0.63
ATG4C-201ENST00000317868 RTEL1-TNFRSF6BF6WH68 1400 aa18.99■□□□□ 0.63
ATG4C-201ENST00000317868 MRS2Q9HD23 443 aa18.98■□□□□ 0.63
ATG4C-201ENST00000317868 TRAPPC8Q9Y2L5 1435 aa18.97■□□□□ 0.63
ATG4C-201ENST00000317868 CARD11Q9BXL7 1154 aa18.97■□□□□ 0.63
ATG4C-201ENST00000317868 ZNF326Q5BKZ1 582 aaKnown RBP18.97■□□□□ 0.63
ATG4C-201ENST00000317868 VWDEQ8N2E2 1590 aa18.96■□□□□ 0.63
ATG4C-201ENST00000317868 BCANQ96GW7 911 aa18.96■□□□□ 0.63
ATG4C-201ENST00000317868 TET3O43151 1660 aa18.96■□□□□ 0.63
ATG4C-201ENST00000317868 MADDQ8WXG6 1647 aa18.95■□□□□ 0.62
ATG4C-201ENST00000317868 IQGAP1P46940 1657 aa18.95■□□□□ 0.62
ATG4C-201ENST00000317868 DCAF11Q8TEB1 546 aa18.95■□□□□ 0.62
ATG4C-201ENST00000317868 TRPM2O94759 1503 aa18.95■□□□□ 0.62
ATG4C-201ENST00000317868 KTN1Q86UP2 1357 aaKnown RBP18.93■□□□□ 0.62
ATG4C-201ENST00000317868 COL17A1Q9UMD9 1497 aaPredicted RBP18.93■□□□□ 0.62
ATG4C-201ENST00000317868 WDR7Q9Y4E6 1490 aa18.93■□□□□ 0.62
ATG4C-201ENST00000317868 NEURL4Q96JN8 1562 aa18.93■□□□□ 0.62
ATG4C-201ENST00000317868 EFCAB2Q5VUJ9 269 aa18.91■□□□□ 0.62
ATG4C-201ENST00000317868 ST20-MTHFSA0A0A6YYL1 179 aa18.91■□□□□ 0.62
ATG4C-201ENST00000317868 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
ATG4C-201ENST00000317868 CLTCL1P53675 1640 aa18.9■□□□□ 0.62
ATG4C-201ENST00000317868 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
ATG4C-201ENST00000317868 FAM9BQ8IZU0 186 aa18.9■□□□□ 0.62
ATG4C-201ENST00000317868 MROH1Q8NDA8 1641 aa18.9■□□□□ 0.62
ATG4C-201ENST00000317868 KIAA1210Q9ULL0 1709 aa18.89■□□□□ 0.61
ATG4C-201ENST00000317868 KDM2AQ9Y2K7 1162 aa18.88■□□□□ 0.61
ATG4C-201ENST00000317868 PTPRTO14522 1441 aa18.88■□□□□ 0.61
ATG4C-201ENST00000317868 LRPPRCP42704 1394 aaKnown RBP18.87■□□□□ 0.61
ATG4C-201ENST00000317868 SMG6Q86US8 1419 aaKnown RBP18.87■□□□□ 0.61
ATG4C-201ENST00000317868 IFT172Q9UG01 1749 aa18.85■□□□□ 0.61
ATG4C-201ENST00000317868 KIDINS220Q9ULH0 1771 aa18.84■□□□□ 0.61
ATG4C-201ENST00000317868 FANCAO15360 1455 aa18.84■□□□□ 0.61
ATG4C-201ENST00000317868 BRD4O60885 1362 aaPredicted RBP18.84■□□□□ 0.61
ATG4C-201ENST00000317868 PARD3Q8TEW0 1356 aa18.83■□□□□ 0.6
ATG4C-201ENST00000317868 PNISRQ8TF01 805 aaKnown RBP18.83■□□□□ 0.6
ATG4C-201ENST00000317868 NBPF1Q3BBV0 1214 aa18.81■□□□□ 0.6
ATG4C-201ENST00000317868 TESK2Q96S53 571 aa18.81■□□□□ 0.6
ATG4C-201ENST00000317868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
ATG4C-201ENST00000317868 MYBBP1AQ9BQG0 1328 aaKnown RBP18.8■□□□□ 0.6
ATG4C-201ENST00000317868 RALBP1Q15311 655 aa18.8■□□□□ 0.6
ATG4C-201ENST00000317868 ZMYM4Q5VZL5 1548 aa18.79■□□□□ 0.6
ATG4C-201ENST00000317868 SPAG9O60271 1321 aaKnown RBP18.79■□□□□ 0.6
ATG4C-201ENST00000317868 DISP3Q9P2K9 1392 aa18.79■□□□□ 0.6
ATG4C-201ENST00000317868 MYOM1P52179 1685 aa18.79■□□□□ 0.6
ATG4C-201ENST00000317868 KIF1BO60333 1816 aa18.79■□□□□ 0.6
ATG4C-201ENST00000317868 RNF123Q5XPI4 1314 aa18.78■□□□□ 0.6
ATG4C-201ENST00000317868 SCAPERQ9BY12 1400 aa18.78■□□□□ 0.6
ATG4C-201ENST00000317868 PER1O15534 1290 aaPredicted RBP18.77■□□□□ 0.6
ATG4C-201ENST00000317868 CFAP74Q9C0B2 1584 aa18.77■□□□□ 0.59
ATG4C-201ENST00000317868 POLR3GLQ9BT43 218 aa18.77■□□□□ 0.59
ATG4C-201ENST00000317868 ADGRL1O94910 1474 aa18.76■□□□□ 0.59
ATG4C-201ENST00000317868 RGL3Q3MIN7 710 aa18.76■□□□□ 0.59
ATG4C-201ENST00000317868 EFCAB6Q5THR3 1501 aa18.76■□□□□ 0.59
ATG4C-201ENST00000317868 LMTK2Q8IWU2 1503 aa18.75■□□□□ 0.59
ATG4C-201ENST00000317868 MROH2AA6NES4 1674 aa18.75■□□□□ 0.59
ATG4C-201ENST00000317868 PPRC1Q5VV67 1664 aaKnown RBP18.75■□□□□ 0.59
ATG4C-201ENST00000317868 SYNMO15061 1565 aa18.75■□□□□ 0.59
ATG4C-201ENST00000317868 WASHC2CQ9Y4E1 1318 aa18.75■□□□□ 0.59
ATG4C-201ENST00000317868 ASXL2Q76L83 1435 aa18.74■□□□□ 0.59
ATG4C-201ENST00000317868 AFAP1Q8N556 730 aa18.74■□□□□ 0.59
ATG4C-201ENST00000317868 MAP3K4Q9Y6R4 1608 aa18.74■□□□□ 0.59
ATG4C-201ENST00000317868 INSRP06213 1382 aa18.74■□□□□ 0.59
ATG4C-201ENST00000317868 PPP4R2Q9NY27 417 aa18.73■□□□□ 0.59
ATG4C-201ENST00000317868 NUDCQ9Y266 331 aa18.73■□□□□ 0.59
ATG4C-201ENST00000317868 IRX6P78412 446 aaPredicted RBP18.72■□□□□ 0.59
ATG4C-201ENST00000317868 ABCA6Q8N139 1617 aa18.72■□□□□ 0.59
ATG4C-201ENST00000317868 STAC3Q96MF2 364 aa18.72■□□□□ 0.59
ATG4C-201ENST00000317868 MYOM2P54296 1465 aa18.72■□□□□ 0.59
ATG4C-201ENST00000317868 MYT1Q01538 1121 aa18.71■□□□□ 0.59
ATG4C-201ENST00000317868 MYO3AQ8NEV4 1616 aa18.71■□□□□ 0.59
ATG4C-201ENST00000317868 TMC1Q8TDI8 760 aa18.7■□□□□ 0.58
ATG4C-201ENST00000317868 SCAF11Q99590 1463 aaKnown RBP18.69■□□□□ 0.58
ATG4C-201ENST00000317868 RBM19Q9Y4C8 960 aaKnown RBP18.69■□□□□ 0.58
ATG4C-201ENST00000317868 KDM5AP29375 1690 aaKnown RBP18.68■□□□□ 0.58
ATG4C-201ENST00000317868 FRMPD1Q5SYB0 1578 aa18.68■□□□□ 0.58
ATG4C-201ENST00000317868 ZNF518AQ6AHZ1 1483 aa18.67■□□□□ 0.58
ATG4C-201ENST00000317868 NLRP13Q86W25 1043 aa18.67■□□□□ 0.58
ATG4C-201ENST00000317868 NRXN1Q9ULB1 1477 aa18.67■□□□□ 0.58
ATG4C-201ENST00000317868 BLMP54132 1417 aaPredicted RBP18.67■□□□□ 0.58
ATG4C-201ENST00000317868 KANK1Q14678 1352 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms