RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SHANK2Q9UPX8 1470 aa31.07■■■□□ 2.56
PDZRN3-202ENST00000308537 EIF2AK4Q9P2K8 1649 aaKnown RBP31.04■■■□□ 2.56
PDZRN3-202ENST00000308537 KDM5DQ9BY66 1539 aa31.03■■■□□ 2.56
PDZRN3-202ENST00000308537 MROH1Q8NDA8 1641 aa31.03■■■□□ 2.56
PDZRN3-202ENST00000308537 MYO3AQ8NEV4 1616 aa31.02■■■□□ 2.56
PDZRN3-202ENST00000308537 DAPK1P53355 1430 aa31.02■■■□□ 2.56
PDZRN3-202ENST00000308537 ZNF142P52746 1687 aaPredicted RBP31.02■■■□□ 2.56
PDZRN3-202ENST00000308537 ILDR1Q86SU0 546 aaPredicted RBP31■■■□□ 2.55
PDZRN3-202ENST00000308537 DUOX2Q9NRD8 1548 aa30.98■■■□□ 2.55
PDZRN3-202ENST00000308537 PZPP20742 1482 aa30.95■■■□□ 2.55
PDZRN3-202ENST00000308537 NCOA1Q15788 1441 aa30.94■■■□□ 2.54
PDZRN3-202ENST00000308537 CEP170BQ9Y4F5 1589 aaPredicted RBP30.94■■■□□ 2.54
PDZRN3-202ENST00000308537 ABCC3O15438 1527 aa30.93■■■□□ 2.54
PDZRN3-202ENST00000308537 KIF15Q9NS87 1388 aa30.92■■■□□ 2.54
PDZRN3-202ENST00000308537 ZC3H13Q5T200 1668 aaKnown RBP30.91■■■□□ 2.54
PDZRN3-202ENST00000308537 CAMSAP1Q5T5Y3 1602 aa30.91■■■□□ 2.54
PDZRN3-202ENST00000308537 FBXO31Q5XUX0 539 aaPredicted RBP30.89■■■□□ 2.54
PDZRN3-202ENST00000308537 WASHC2CQ9Y4E1 1318 aa30.89■■■□□ 2.54
PDZRN3-202ENST00000308537 ERBINQ96RT1 1412 aa30.88■■■□□ 2.53
PDZRN3-202ENST00000308537 PRDM15P57071 1507 aaPredicted RBP30.87■■■□□ 2.53
PDZRN3-202ENST00000308537 PTPRTO14522 1441 aa30.86■■■□□ 2.53
PDZRN3-202ENST00000308537 DEPDC5O75140 1603 aa30.86■■■□□ 2.53
PDZRN3-202ENST00000308537 CEP152O94986 1710 aa30.86■■■□□ 2.53
PDZRN3-202ENST00000308537 ADGRL2O95490 1459 aa30.85■■■□□ 2.53
PDZRN3-202ENST00000308537 A2ML1A8K2U0 1454 aa30.84■■■□□ 2.53
PDZRN3-202ENST00000308537 PLA2R1Q13018 1463 aa30.83■■■□□ 2.53
PDZRN3-202ENST00000308537 RRP7BPQ9NSQ0 103 aa30.83■■■□□ 2.53
PDZRN3-202ENST00000308537 TNRQ92752 1358 aa30.82■■■□□ 2.52
PDZRN3-202ENST00000308537 SPATA31D1Q6ZQQ2 1576 aa30.8■■■□□ 2.52
PDZRN3-202ENST00000308537 DMRT2Q9Y5R5 561 aa30.79■■■□□ 2.52
PDZRN3-202ENST00000308537 CHIC2Q9UKJ5 165 aa30.78■■■□□ 2.52
PDZRN3-202ENST00000308537 ANKRD30AQ9BXX3 1397 aa30.78■■■□□ 2.52
PDZRN3-202ENST00000308537 VWDEQ8N2E2 1590 aa30.75■■■□□ 2.51
PDZRN3-202ENST00000308537 ERVK-7P63135 1459 aa30.75■■■□□ 2.51
PDZRN3-202ENST00000308537 FAM50AQ14320 339 aaKnown RBP30.74■■■□□ 2.51
PDZRN3-202ENST00000308537 FBXO41Q8TF61 875 aa30.74■■■□□ 2.51
PDZRN3-202ENST00000308537 NLRP1Q9C000 1473 aa30.72■■■□□ 2.51
PDZRN3-202ENST00000308537 LTBP4Q8N2S1 1624 aa30.72■■■□□ 2.51
PDZRN3-202ENST00000308537 NCKAP5LQ9HCH0 1330 aa30.72■■■□□ 2.51
PDZRN3-202ENST00000308537 ARHGAP31Q2M1Z3 1444 aa30.71■■■□□ 2.51
PDZRN3-202ENST00000308537 CFAP65Q6ZU64 1925 aaKnown RBP30.71■■■□□ 2.51
PDZRN3-202ENST00000308537 CERKQ8TCT0 537 aa30.69■■■□□ 2.5
PDZRN3-202ENST00000308537 LMTK2Q8IWU2 1503 aa30.68■■■□□ 2.5
PDZRN3-202ENST00000308537 NEURL4Q96JN8 1562 aa30.68■■■□□ 2.5
PDZRN3-202ENST00000308537 PKD2Q13563 968 aa30.66■■■□□ 2.5
PDZRN3-202ENST00000308537 POLR1AO95602 1720 aaPredicted RBP30.65■■■□□ 2.5
PDZRN3-202ENST00000308537 PPARGC1BQ86YN6 1023 aaKnown RBP30.65■■■□□ 2.5
PDZRN3-202ENST00000308537 UGGT1Q9NYU2 1555 aa30.64■■■□□ 2.5
PDZRN3-202ENST00000308537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.62■■■□□ 2.49
PDZRN3-202ENST00000308537 ANKRD50Q9ULJ7 1429 aa30.62■■■□□ 2.49
PDZRN3-202ENST00000308537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.59■■■□□ 2.49
PDZRN3-202ENST00000308537 UBR1Q8IWV7 1749 aa30.59■■■□□ 2.49
PDZRN3-202ENST00000308537 ROCK1Q13464 1354 aa30.58■■■□□ 2.49
PDZRN3-202ENST00000308537 EFCAB6Q5THR3 1501 aa30.57■■■□□ 2.48
PDZRN3-202ENST00000308537 KANK1Q14678 1352 aa30.55■■■□□ 2.48
PDZRN3-202ENST00000308537 UNC13BO14795 1591 aa30.54■■■□□ 2.48
PDZRN3-202ENST00000308537 MED14O60244 1454 aa30.53■■■□□ 2.48
PDZRN3-202ENST00000308537 THEMISQ8N1K5 641 aaPredicted RBP30.53■■■□□ 2.48
PDZRN3-202ENST00000308537 RRBP1Q9P2E9 1410 aaKnown RBP30.53■■■□□ 2.48
PDZRN3-202ENST00000308537 ZNF335Q9H4Z2 1342 aaPredicted RBP30.52■■■□□ 2.48
PDZRN3-202ENST00000308537 SYNMO15061 1565 aa30.52■■■□□ 2.48
PDZRN3-202ENST00000308537 NOS1P29475 1434 aa30.5■■■□□ 2.47
PDZRN3-202ENST00000308537 PIK3C2BO00750 1634 aa30.49■■■□□ 2.47
PDZRN3-202ENST00000308537 TET3O43151 1660 aa30.47■■■□□ 2.47
PDZRN3-202ENST00000308537 IQSEC2Q5JU85 1478 aa30.47■■■□□ 2.47
PDZRN3-202ENST00000308537 ARHGAP23Q9P227 1491 aa30.47■■■□□ 2.47
PDZRN3-202ENST00000308537 ANKLE2Q86XL3 938 aa30.45■■■□□ 2.47
PDZRN3-202ENST00000308537 SLIT1O75093 1534 aa30.45■■■□□ 2.47
PDZRN3-202ENST00000308537 KDM5AP29375 1690 aaKnown RBP30.43■■■□□ 2.46
PDZRN3-202ENST00000308537 IQGAP1P46940 1657 aa30.42■■■□□ 2.46
PDZRN3-202ENST00000308537 GCC2Q8IWJ2 1684 aa30.42■■■□□ 2.46
PDZRN3-202ENST00000308537 NPHP4O75161 1426 aaPredicted RBP30.42■■■□□ 2.46
PDZRN3-202ENST00000308537 RPRD2Q5VT52 1461 aaKnown RBP30.42■■■□□ 2.46
PDZRN3-202ENST00000308537 IQGAP3Q86VI3 1631 aa30.41■■■□□ 2.46
PDZRN3-202ENST00000308537 ITGAEP38570 1179 aa30.38■■■□□ 2.45
PDZRN3-202ENST00000308537 IDI1Q13907 227 aa30.38■■■□□ 2.45
PDZRN3-202ENST00000308537 E9PCH4 1651 aa30.37■■■□□ 2.45
PDZRN3-202ENST00000308537 SCAF11Q99590 1463 aaKnown RBP30.36■■■□□ 2.45
PDZRN3-202ENST00000308537 LTKP29376 864 aa30.35■■■□□ 2.45
PDZRN3-202ENST00000308537 STRCP1A6NGW2 1772 aa30.33■■■□□ 2.45
PDZRN3-202ENST00000308537 ADGRB3O60242 1522 aa30.32■■■□□ 2.44
PDZRN3-202ENST00000308537 TMEM2Q9UHN6 1383 aa30.32■■■□□ 2.44
PDZRN3-202ENST00000308537 CPS1P31327 1500 aa30.3■■■□□ 2.44
PDZRN3-202ENST00000308537 MYO5BQ9ULV0 1848 aa30.27■■■□□ 2.44
PDZRN3-202ENST00000308537 NAIPQ13075 1403 aa30.27■■■□□ 2.44
PDZRN3-202ENST00000308537 SLC52A1Q9NWF4 448 aa30.26■■■□□ 2.43
PDZRN3-202ENST00000308537 NUP155O75694 1391 aa30.26■■■□□ 2.43
PDZRN3-202ENST00000308537 TXNDC2Q86VQ3 553 aa30.24■■■□□ 2.43
PDZRN3-202ENST00000308537 TMEM131LA2VDJ0 1609 aa30.23■■■□□ 2.43
PDZRN3-202ENST00000308537 ZFYVE9O95405 1425 aa30.2■■■□□ 2.42
PDZRN3-202ENST00000308537 HFM1A2PYH4 1435 aa30.17■■■□□ 2.42
PDZRN3-202ENST00000308537 ALKQ9UM73 1620 aa30.17■■■□□ 2.42
PDZRN3-202ENST00000308537 STAG3Q9UJ98 1225 aa30.16■■■□□ 2.42
PDZRN3-202ENST00000308537 EID1Q9Y6B2 187 aa30.15■■■□□ 2.42
PDZRN3-202ENST00000308537 LRRC7Q96NW7 1537 aa30.15■■■□□ 2.42
PDZRN3-202ENST00000308537 SPHKAPQ2M3C7 1700 aa30.12■■■□□ 2.41
PDZRN3-202ENST00000308537 XIRP1Q702N8 1843 aaKnown RBP30.1■■■□□ 2.41
PDZRN3-202ENST00000308537 UBAP1LF5GYI3 381 aa30.1■■■□□ 2.41
PDZRN3-202ENST00000308537 RIMS2Q9UQ26 1411 aa30.07■■■□□ 2.4
PDZRN3-202ENST00000308537 NWD1Q149M9 1564 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms