RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 NCKAP5LQ9HCH0 1330 aa32.4■■■□□ 2.78
RER1-201ENST00000306256 MAST1Q9Y2H9 1570 aa32.4■■■□□ 2.78
RER1-201ENST00000306256 LTBP4Q8N2S1 1624 aa32.39■■■□□ 2.78
RER1-201ENST00000306256 FAM135AQ9P2D6 1515 aa32.38■■■□□ 2.77
RER1-201ENST00000306256 PLA2R1Q13018 1463 aa32.37■■■□□ 2.77
RER1-201ENST00000306256 A2ML1A8K2U0 1454 aa32.35■■■□□ 2.77
RER1-201ENST00000306256 PZPP20742 1482 aa32.35■■■□□ 2.77
RER1-201ENST00000306256 MIA2Q96PC5 1412 aa32.34■■■□□ 2.77
RER1-201ENST00000306256 DNMT1P26358 1616 aaKnown RBP32.34■■■□□ 2.77
RER1-201ENST00000306256 FBXO31Q5XUX0 539 aaPredicted RBP32.34■■■□□ 2.77
RER1-201ENST00000306256 WASHC2CQ9Y4E1 1318 aa32.33■■■□□ 2.77
RER1-201ENST00000306256 RNF17Q9BXT8 1623 aaKnown RBP32.33■■■□□ 2.77
RER1-201ENST00000306256 TCOF1Q13428 1488 aaKnown RBP32.32■■■□□ 2.76
RER1-201ENST00000306256 TNRQ92752 1358 aa32.32■■■□□ 2.76
RER1-201ENST00000306256 PKD2Q13563 968 aa32.28■■■□□ 2.76
RER1-201ENST00000306256 EIF2AK4Q9P2K8 1649 aaKnown RBP32.27■■■□□ 2.76
RER1-201ENST00000306256 CROCC2H7BZ55 1655 aa32.26■■■□□ 2.75
RER1-201ENST00000306256 POLR1AO95602 1720 aaPredicted RBP32.26■■■□□ 2.75
RER1-201ENST00000306256 APLP2Q06481 763 aa32.25■■■□□ 2.75
RER1-201ENST00000306256 PTPN23Q9H3S7 1636 aa32.25■■■□□ 2.75
RER1-201ENST00000306256 ABCC3O15438 1527 aa32.24■■■□□ 2.75
RER1-201ENST00000306256 ZC3H13Q5T200 1668 aaKnown RBP32.24■■■□□ 2.75
RER1-201ENST00000306256 ZNF335Q9H4Z2 1342 aaPredicted RBP32.24■■■□□ 2.75
RER1-201ENST00000306256 MROH1Q8NDA8 1641 aa32.22■■■□□ 2.75
RER1-201ENST00000306256 CFAP65Q6ZU64 1925 aaKnown RBP32.22■■■□□ 2.75
RER1-201ENST00000306256 CEP152O94986 1710 aa32.22■■■□□ 2.75
RER1-201ENST00000306256 IQSEC2Q5JU85 1478 aa32.19■■■□□ 2.74
RER1-201ENST00000306256 DUOX2Q9NRD8 1548 aa32.18■■■□□ 2.74
RER1-201ENST00000306256 NEURL4Q96JN8 1562 aa32.17■■■□□ 2.74
RER1-201ENST00000306256 ABCC5O15440 1437 aa32.17■■■□□ 2.74
RER1-201ENST00000306256 SHANK2Q9UPX8 1470 aa32.16■■■□□ 2.74
RER1-201ENST00000306256 NLRP1Q9C000 1473 aa32.15■■■□□ 2.74
RER1-201ENST00000306256 KIF15Q9NS87 1388 aa32.13■■■□□ 2.73
RER1-201ENST00000306256 UGGT1Q9NYU2 1555 aa32.12■■■□□ 2.73
RER1-201ENST00000306256 FGD6Q6ZV73 1430 aa32.12■■■□□ 2.73
RER1-201ENST00000306256 SPATA31D1Q6ZQQ2 1576 aa32.11■■■□□ 2.73
RER1-201ENST00000306256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.11■■■□□ 2.734e-7■■■■□ 23.8
RER1-201ENST00000306256 DAPK1P53355 1430 aa32.1■■■□□ 2.73
RER1-201ENST00000306256 ERVK-7P63135 1459 aa32.1■■■□□ 2.73
RER1-201ENST00000306256 RRP7BPQ9NSQ0 103 aa32.08■■■□□ 2.73
RER1-201ENST00000306256 PRDM15P57071 1507 aaPredicted RBP32.05■■■□□ 2.72
RER1-201ENST00000306256 THEMISQ8N1K5 641 aaPredicted RBP32.05■■■□□ 2.72
RER1-201ENST00000306256 ERBINQ96RT1 1412 aa32.05■■■□□ 2.72
RER1-201ENST00000306256 ANKLE2Q86XL3 938 aa32.03■■■□□ 2.72
RER1-201ENST00000306256 DEPDC5O75140 1603 aa32.01■■■□□ 2.72
RER1-201ENST00000306256 CHIC2Q9UKJ5 165 aa31.99■■■□□ 2.71
RER1-201ENST00000306256 UBR1Q8IWV7 1749 aa31.98■■■□□ 2.71
RER1-201ENST00000306256 UBAP1LF5GYI3 381 aa31.98■■■□□ 2.71
RER1-201ENST00000306256 IQGAP1P46940 1657 aa31.98■■■□□ 2.71
RER1-201ENST00000306256 NPHP4O75161 1426 aaPredicted RBP31.97■■■□□ 2.71
RER1-201ENST00000306256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.96■■■□□ 2.711e-6■□□□□ 9.9
RER1-201ENST00000306256 MED14O60244 1454 aa31.96■■■□□ 2.71
RER1-201ENST00000306256 VWDEQ8N2E2 1590 aa31.95■■■□□ 2.71
RER1-201ENST00000306256 ANKRD30AQ9BXX3 1397 aa31.94■■■□□ 2.7
RER1-201ENST00000306256 CPS1P31327 1500 aa31.94■■■□□ 2.7
RER1-201ENST00000306256 ARHGAP31Q2M1Z3 1444 aa31.92■■■□□ 2.7
RER1-201ENST00000306256 DISP3Q9P2K9 1392 aa31.9■■■□□ 2.7
RER1-201ENST00000306256 FAM50AQ14320 339 aaKnown RBP31.88■■■□□ 2.69
RER1-201ENST00000306256 KANK1Q14678 1352 aa31.88■■■□□ 2.69
RER1-201ENST00000306256 STRCP1A6NGW2 1772 aa31.86■■■□□ 2.69
RER1-201ENST00000306256 ADGRL2O95490 1459 aa31.85■■■□□ 2.69
RER1-201ENST00000306256 PIK3C2BO00750 1634 aa31.85■■■□□ 2.69
RER1-201ENST00000306256 LMTK2Q8IWU2 1503 aa31.82■■■□□ 2.68
RER1-201ENST00000306256 SCAF11Q99590 1463 aaKnown RBP31.81■■■□□ 2.68
RER1-201ENST00000306256 ARHGAP23Q9P227 1491 aa31.79■■■□□ 2.68
RER1-201ENST00000306256 SLIT1O75093 1534 aa31.79■■■□□ 2.68
RER1-201ENST00000306256 EFCAB6Q5THR3 1501 aa31.77■■■□□ 2.68
RER1-201ENST00000306256 SYNMO15061 1565 aa31.77■■■□□ 2.68
RER1-201ENST00000306256 SCAF1Q9H7N4 1312 aaKnown RBP31.76■■■□□ 2.68
RER1-201ENST00000306256 LTKP29376 864 aa31.76■■■□□ 2.67
RER1-201ENST00000306256 PIP4K2BP78356 416 aa31.74■■■□□ 2.67
RER1-201ENST00000306256 TXNDC2Q86VQ3 553 aa31.73■■■□□ 2.67
RER1-201ENST00000306256 ANKRD50Q9ULJ7 1429 aa31.73■■■□□ 2.67
RER1-201ENST00000306256 TOM1O60784 492 aa31.72■■■□□ 2.67
RER1-201ENST00000306256 ILDR2Q71H61 639 aa31.72■■■□□ 2.67
RER1-201ENST00000306256 KDM5AP29375 1690 aaKnown RBP31.72■■■□□ 2.67
RER1-201ENST00000306256 LRRC7Q96NW7 1537 aa31.7■■■□□ 2.67
RER1-201ENST00000306256 STAG3Q9UJ98 1225 aa31.7■■■□□ 2.67
RER1-201ENST00000306256 ALKQ9UM73 1620 aa31.7■■■□□ 2.66
RER1-201ENST00000306256 NOS1P29475 1434 aa31.68■■■□□ 2.66
RER1-201ENST00000306256 IDI1Q13907 227 aa31.68■■■□□ 2.66
RER1-201ENST00000306256 TMEM2Q9UHN6 1383 aa31.68■■■□□ 2.66
RER1-201ENST00000306256 EID1Q9Y6B2 187 aa31.67■■■□□ 2.66
RER1-201ENST00000306256 TET3O43151 1660 aa31.65■■■□□ 2.66
RER1-201ENST00000306256 HSPA1LP34931 641 aa31.65■■■□□ 2.66
RER1-201ENST00000306256 ADGRB3O60242 1522 aa31.64■■■□□ 2.66
RER1-201ENST00000306256 MYO5BQ9ULV0 1848 aa31.63■■■□□ 2.65
RER1-201ENST00000306256 UNC13BO14795 1591 aa31.62■■■□□ 2.65
RER1-201ENST00000306256 XIRP1Q702N8 1843 aaKnown RBP31.62■■■□□ 2.65
RER1-201ENST00000306256 GCC2Q8IWJ2 1684 aa31.61■■■□□ 2.65
RER1-201ENST00000306256 RPRD2Q5VT52 1461 aaKnown RBP31.59■■■□□ 2.65
RER1-201ENST00000306256 PPARGC1BQ86YN6 1023 aaKnown RBP31.58■■■□□ 2.65
RER1-201ENST00000306256 SLC52A1Q9NWF4 448 aa31.54■■■□□ 2.64
RER1-201ENST00000306256 ROCK1Q13464 1354 aa31.54■■■□□ 2.64
RER1-201ENST00000306256 E9PCH4 1651 aa31.53■■■□□ 2.64
RER1-201ENST00000306256 ITGAEP38570 1179 aa31.51■■■□□ 2.63
RER1-201ENST00000306256 IQGAP3Q86VI3 1631 aa31.49■■■□□ 2.63
RER1-201ENST00000306256 MED1Q15648 1581 aaPredicted RBP31.49■■■□□ 2.63
RER1-201ENST00000306256 SENP3Q9H4L4 574 aaPredicted RBP31.49■■■□□ 2.63
RER1-201ENST00000306256 SLC26A8Q96RN1 970 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms