RNA–Protein interactions for RNA: ENST00000303757.12

LST1-202, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-202ENST00000303757 UBAP1LF5GYI3 381 aa25.82■■□□□ 1.72
LST1-202ENST00000303757 CCDC18Q5T9S5 1454 aa25.82■■□□□ 1.72
LST1-202ENST00000303757 SYCP2Q9BX26 1530 aa25.82■■□□□ 1.72
LST1-202ENST00000303757 NPATQ14207 1427 aa25.8■■□□□ 1.72
LST1-202ENST00000303757 CASKIN1Q8WXD9 1431 aa25.8■■□□□ 1.72
LST1-202ENST00000303757 HNRNPMP52272 730 aaKnown RBP eCLIP25.8■■□□□ 1.72
LST1-202ENST00000303757 SPAG9O60271 1321 aaKnown RBP25.79■■□□□ 1.72
LST1-202ENST00000303757 MYO3AQ8NEV4 1616 aa25.78■■□□□ 1.72
LST1-202ENST00000303757 ZNF142P52746 1687 aaPredicted RBP25.74■■□□□ 1.71
LST1-202ENST00000303757 ATP7AQ04656 1500 aa25.74■■□□□ 1.71
LST1-202ENST00000303757 GGT6Q6P531 493 aa25.73■■□□□ 1.71
LST1-202ENST00000303757 CEP170BQ9Y4F5 1589 aaPredicted RBP25.73■■□□□ 1.71
LST1-202ENST00000303757 GPATCH8Q9UKJ3 1502 aaKnown RBP25.72■■□□□ 1.71
LST1-202ENST00000303757 PTPRKQ15262 1439 aa25.7■■□□□ 1.7
LST1-202ENST00000303757 A2MP01023 1474 aa25.69■■□□□ 1.7
LST1-202ENST00000303757 PLXNC1O60486 1568 aa25.69■■□□□ 1.7
LST1-202ENST00000303757 INO80Q9ULG1 1556 aaPredicted RBP25.69■■□□□ 1.7
LST1-202ENST00000303757 PKD2Q13563 968 aa25.68■■□□□ 1.7
LST1-202ENST00000303757 PLA2R1Q13018 1463 aa25.67■■□□□ 1.7
LST1-202ENST00000303757 TCOF1Q13428 1488 aaKnown RBP25.66■■□□□ 1.7
LST1-202ENST00000303757 FYCO1Q9BQS8 1478 aa25.66■■□□□ 1.7
LST1-202ENST00000303757 CFDP1Q9UEE9 299 aaPredicted RBP25.65■■□□□ 1.7
LST1-202ENST00000303757 PIP4K2BP78356 416 aa25.61■■□□□ 1.69
LST1-202ENST00000303757 ADGBQ8N7X0 1667 aa25.61■■□□□ 1.69
LST1-202ENST00000303757 CCNB3Q8WWL7 1395 aa25.6■■□□□ 1.69
LST1-202ENST00000303757 DNMT1P26358 1616 aaKnown RBP25.59■■□□□ 1.69
LST1-202ENST00000303757 HSPA1LP34931 641 aa25.59■■□□□ 1.69
LST1-202ENST00000303757 KIAA1107Q9UPP5 1409 aa25.59■■□□□ 1.69
LST1-202ENST00000303757 PLEKHH2Q8IVE3 1493 aa25.58■■□□□ 1.69
LST1-202ENST00000303757 A2ML1A8K2U0 1454 aa25.57■■□□□ 1.68
LST1-202ENST00000303757 ZNF644Q9H582 1327 aaPredicted RBP25.57■■□□□ 1.68
LST1-202ENST00000303757 POLR1AO95602 1720 aaPredicted RBP25.56■■□□□ 1.68
LST1-202ENST00000303757 MED1Q15648 1581 aaPredicted RBP25.55■■□□□ 1.68
LST1-202ENST00000303757 FBXO31Q5XUX0 539 aaPredicted RBP25.52■■□□□ 1.68
LST1-202ENST00000303757 MTUS2Q5JR59 1369 aa25.51■■□□□ 1.67
LST1-202ENST00000303757 NEURL4Q96JN8 1562 aa25.51■■□□□ 1.67
LST1-202ENST00000303757 TIAM1Q13009 1591 aa25.48■■□□□ 1.67
LST1-202ENST00000303757 TNRQ92752 1358 aa25.47■■□□□ 1.67
LST1-202ENST00000303757 TOM1O60784 492 aa25.47■■□□□ 1.67
LST1-202ENST00000303757 SHANK2Q9UPX8 1470 aa25.47■■□□□ 1.67
LST1-202ENST00000303757 CPS1P31327 1500 aa25.46■■□□□ 1.67
LST1-202ENST00000303757 KIF3BO15066 747 aa25.45■■□□□ 1.66
LST1-202ENST00000303757 MBD5Q9P267 1494 aa25.45■■□□□ 1.66
LST1-202ENST00000303757 ZBTB12Q9Y330 459 aaPredicted RBP25.44■■□□□ 1.66
LST1-202ENST00000303757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.44■■□□□ 1.66
LST1-202ENST00000303757 DHX29Q7Z478 1369 aaKnown RBP25.43■■□□□ 1.66
LST1-202ENST00000303757 VWDEQ8N2E2 1590 aa25.39■■□□□ 1.66
LST1-202ENST00000303757 RTEL1-TNFRSF6BF6WH68 1400 aa25.39■■□□□ 1.66
LST1-202ENST00000303757 ANKLE2Q86XL3 938 aa25.39■■□□□ 1.66
LST1-202ENST00000303757 PZPP20742 1482 aa25.39■■□□□ 1.65
LST1-202ENST00000303757 KDM5DQ9BY66 1539 aa25.38■■□□□ 1.65
LST1-202ENST00000303757 WASHC2CQ9Y4E1 1318 aa25.37■■□□□ 1.65
LST1-202ENST00000303757 ALKQ9UM73 1620 aa25.37■■□□□ 1.65
LST1-202ENST00000303757 EHBP1L1Q8N3D4 1523 aa25.37■■□□□ 1.65
LST1-202ENST00000303757 THEMISQ8N1K5 641 aaPredicted RBP25.34■■□□□ 1.65
LST1-202ENST00000303757 NPHP4O75161 1426 aaPredicted RBP25.34■■□□□ 1.65
LST1-202ENST00000303757 UGGT1Q9NYU2 1555 aa25.34■■□□□ 1.65
LST1-202ENST00000303757 STRCP1A6NGW2 1772 aa25.33■■□□□ 1.65
LST1-202ENST00000303757 MIA2Q96PC5 1412 aa25.32■■□□□ 1.64
LST1-202ENST00000303757 CCDC141Q6ZP82 1450 aa25.32■■□□□ 1.64
LST1-202ENST00000303757 IQGAP1P46940 1657 aa25.31■■□□□ 1.64
LST1-202ENST00000303757 CAMSAP2Q08AD1 1489 aa25.3■■□□□ 1.64
LST1-202ENST00000303757 FAM135AQ9P2D6 1515 aa25.29■■□□□ 1.64
LST1-202ENST00000303757 DEPDC5O75140 1603 aa25.29■■□□□ 1.64
LST1-202ENST00000303757 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
LST1-202ENST00000303757 NLRP1Q9C000 1473 aa25.28■■□□□ 1.64
LST1-202ENST00000303757 CFAP65Q6ZU64 1925 aaKnown RBP25.28■■□□□ 1.64
LST1-202ENST00000303757 MED14O60244 1454 aa25.28■■□□□ 1.64
LST1-202ENST00000303757 LRRC7Q96NW7 1537 aa25.24■■□□□ 1.63
LST1-202ENST00000303757 NCOA2Q15596 1464 aa25.24■■□□□ 1.63
LST1-202ENST00000303757 MKRN4PQ13434 485 aaPredicted RBP25.22■■□□□ 1.63
LST1-202ENST00000303757 RNF17Q9BXT8 1623 aaKnown RBP25.2■■□□□ 1.62
LST1-202ENST00000303757 RSPH4AQ5TD94 716 aa25.18■■□□□ 1.62
LST1-202ENST00000303757 ABCC3O15438 1527 aa25.17■■□□□ 1.62
LST1-202ENST00000303757 TSPY4P0CV99 314 aa25.17■■□□□ 1.62
LST1-202ENST00000303757 TSPY10P0CW01 314 aa25.17■■□□□ 1.62
LST1-202ENST00000303757 SYNMO15061 1565 aa25.17■■□□□ 1.62
LST1-202ENST00000303757 CEP152O94986 1710 aa25.17■■□□□ 1.62
LST1-202ENST00000303757 ZC3H13Q5T200 1668 aaKnown RBP25.17■■□□□ 1.62
LST1-202ENST00000303757 ARHGEF5Q12774 1597 aa25.16■■□□□ 1.62
LST1-202ENST00000303757 UBR1Q8IWV7 1749 aa25.14■■□□□ 1.61
LST1-202ENST00000303757 ERVK-7P63135 1459 aa25.14■■□□□ 1.61
LST1-202ENST00000303757 XIRP1Q702N8 1843 aaKnown RBP25.12■■□□□ 1.61
LST1-202ENST00000303757 RGS17Q9UGC6 210 aaPredicted RBP25.11■■□□□ 1.61
LST1-202ENST00000303757 MROH1Q8NDA8 1641 aa25.09■■□□□ 1.61
LST1-202ENST00000303757 LTKP29376 864 aa25.07■■□□□ 1.6
LST1-202ENST00000303757 SCAF11Q99590 1463 aaKnown RBP25.07■■□□□ 1.6
LST1-202ENST00000303757 EIF2AK4Q9P2K8 1649 aaKnown RBP25.06■■□□□ 1.6
LST1-202ENST00000303757 TXNDC2Q86VQ3 553 aa25.05■■□□□ 1.6
LST1-202ENST00000303757 MAST1Q9Y2H9 1570 aa25.05■■□□□ 1.6
LST1-202ENST00000303757 RBM42Q9BTD8 480 aaKnown RBP25.02■■□□□ 1.6
LST1-202ENST00000303757 ARHGAP23Q9P227 1491 aa24.99■■□□□ 1.59
LST1-202ENST00000303757 SLIT1O75093 1534 aa24.97■■□□□ 1.59
LST1-202ENST00000303757 PIK3C2BO00750 1634 aa24.97■■□□□ 1.59
LST1-202ENST00000303757 LRRC9Q6ZRR7 1453 aa24.96■■□□□ 1.59
LST1-202ENST00000303757 POTEAQ6S8J7 498 aa24.96■■□□□ 1.59
LST1-202ENST00000303757 RBM33Q96EV2 1170 aaKnown RBP24.95■■□□□ 1.58
LST1-202ENST00000303757 EID1Q9Y6B2 187 aa24.95■■□□□ 1.58
LST1-202ENST00000303757 DUOX2Q9NRD8 1548 aa24.93■■□□□ 1.58
LST1-202ENST00000303757 STAG3Q9UJ98 1225 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms