RNA–Protein interactions for RNA: ENST00000301149.7

GPD1-201, Transcript of glycerol-3-phosphate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPD1, Length 3,082 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1-201ENST00000301149 NBPF8Q3BBV2 869 aa16.53■□□□□ 0.24
GPD1-201ENST00000301149 LRPPRCP42704 1394 aaKnown RBP16.52■□□□□ 0.23
GPD1-201ENST00000301149 RRAGDQ9NQL2 400 aaPredicted RBP16.51■□□□□ 0.23
GPD1-201ENST00000301149 RRP7BPQ9NSQ0 103 aa16.51■□□□□ 0.23
GPD1-201ENST00000301149 TROQ12816 1431 aaPredicted RBP16.49■□□□□ 0.23
GPD1-201ENST00000301149 FAM43AQ8N2R8 423 aa16.49■□□□□ 0.23
GPD1-201ENST00000301149 MRS2Q9HD23 443 aa16.48■□□□□ 0.23
GPD1-201ENST00000301149 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
GPD1-201ENST00000301149 NUDCQ9Y266 331 aa16.48■□□□□ 0.23
GPD1-201ENST00000301149 PTPRGP23470 1445 aa16.48■□□□□ 0.23
GPD1-201ENST00000301149 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
GPD1-201ENST00000301149 RGS3P49796 1198 aa16.48■□□□□ 0.23
GPD1-201ENST00000301149 NFKBIBQ15653 356 aa16.48■□□□□ 0.23
GPD1-201ENST00000301149 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
GPD1-201ENST00000301149 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
GPD1-201ENST00000301149 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
GPD1-201ENST00000301149 PDIA4P13667 645 aaKnown RBP16.46■□□□□ 0.23
GPD1-201ENST00000301149 FAM9BQ8IZU0 186 aa16.46■□□□□ 0.23
GPD1-201ENST00000301149 GPATCH8Q9UKJ3 1502 aaKnown RBP16.46■□□□□ 0.22
GPD1-201ENST00000301149 PPM1GO15355 546 aaPredicted RBP16.44■□□□□ 0.22
GPD1-201ENST00000301149 TRPM1Q7Z4N2 1603 aa16.44■□□□□ 0.22
GPD1-201ENST00000301149 USP47Q96K76 1375 aa16.43■□□□□ 0.22
GPD1-201ENST00000301149 BRD4O60885 1362 aaPredicted RBP16.42■□□□□ 0.22
GPD1-201ENST00000301149 GRIN2AQ12879 1464 aa16.41■□□□□ 0.22
GPD1-201ENST00000301149 ABCC10Q5T3U5 1492 aa16.4■□□□□ 0.22
GPD1-201ENST00000301149 KIF15Q9NS87 1388 aa16.39■□□□□ 0.21
GPD1-201ENST00000301149 CHIC2Q9UKJ5 165 aa16.39■□□□□ 0.21
GPD1-201ENST00000301149 EIF4G3O43432 1585 aaKnown RBP16.39■□□□□ 0.21
GPD1-201ENST00000301149 ABCA8O94911 1581 aa16.38■□□□□ 0.21
GPD1-201ENST00000301149 MAST1Q9Y2H9 1570 aa16.38■□□□□ 0.21
GPD1-201ENST00000301149 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
GPD1-201ENST00000301149 UNC13BO14795 1591 aa16.38■□□□□ 0.21
GPD1-201ENST00000301149 SKAP1Q86WV1 359 aa16.37■□□□□ 0.21
GPD1-201ENST00000301149 FRAT2O75474 233 aaPredicted RBP16.37■□□□□ 0.21
GPD1-201ENST00000301149 MAGI1Q96QZ7 1491 aaPredicted RBP16.37■□□□□ 0.21
GPD1-201ENST00000301149 ARID3AQ99856 593 aa16.36■□□□□ 0.21
GPD1-201ENST00000301149 RRP9O43818 475 aaKnown RBP16.36■□□□□ 0.21
GPD1-201ENST00000301149 ANKRD30AQ9BXX3 1397 aa16.36■□□□□ 0.21
GPD1-201ENST00000301149 ZNF608Q9ULD9 1512 aaPredicted RBP16.36■□□□□ 0.21
GPD1-201ENST00000301149 PLEKHH2Q8IVE3 1493 aa16.35■□□□□ 0.21
GPD1-201ENST00000301149 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
GPD1-201ENST00000301149 PNNQ9H307 717 aaKnown RBP16.34■□□□□ 0.21
GPD1-201ENST00000301149 EIF2AK4Q9P2K8 1649 aaKnown RBP16.34■□□□□ 0.21
GPD1-201ENST00000301149 RNF17Q9BXT8 1623 aaKnown RBP16.33■□□□□ 0.21
GPD1-201ENST00000301149 PRDM15P57071 1507 aaPredicted RBP16.33■□□□□ 0.2
GPD1-201ENST00000301149 ANKRD50Q9ULJ7 1429 aa16.32■□□□□ 0.2
GPD1-201ENST00000301149 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
GPD1-201ENST00000301149 PARD3Q8TEW0 1356 aa16.32■□□□□ 0.2
GPD1-201ENST00000301149 RALBP1Q15311 655 aa16.32■□□□□ 0.2
GPD1-201ENST00000301149 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
GPD1-201ENST00000301149 PDE4AP27815 886 aa16.31■□□□□ 0.2
GPD1-201ENST00000301149 PREX2Q70Z35 1606 aa16.31■□□□□ 0.2
GPD1-201ENST00000301149 MYO5CQ9NQX4 1742 aa16.3■□□□□ 0.2
GPD1-201ENST00000301149 PDE3BQ13370 1112 aa16.3■□□□□ 0.2
GPD1-201ENST00000301149 FOXD1Q16676 465 aa16.3■□□□□ 0.2
GPD1-201ENST00000301149 MYBBP1AQ9BQG0 1328 aaKnown RBP16.3■□□□□ 0.2
GPD1-201ENST00000301149 PRG4Q92954 1404 aaPredicted RBP16.29■□□□□ 0.2
GPD1-201ENST00000301149 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
GPD1-201ENST00000301149 NUP160Q12769 1436 aa16.29■□□□□ 0.2
GPD1-201ENST00000301149 IQGAP3Q86VI3 1631 aa16.28■□□□□ 0.2
GPD1-201ENST00000301149 CHMP4BQ9H444 224 aaKnown RBP16.28■□□□□ 0.2
GPD1-201ENST00000301149 PLXNC1O60486 1568 aa16.28■□□□□ 0.2
GPD1-201ENST00000301149 CLASP1Q7Z460 1538 aa16.28■□□□□ 0.2
GPD1-201ENST00000301149 MS4A1P11836 297 aa16.28■□□□□ 0.2
GPD1-201ENST00000301149 C9orf84Q5VXU9 1444 aa16.27■□□□□ 0.2
GPD1-201ENST00000301149 COL17A1Q9UMD9 1497 aaPredicted RBP16.27■□□□□ 0.19
GPD1-201ENST00000301149 ATP10AO60312 1499 aa16.26■□□□□ 0.19
GPD1-201ENST00000301149 BBXQ8WY36 941 aaPredicted RBP16.26■□□□□ 0.19
GPD1-201ENST00000301149 ZNF644Q9H582 1327 aaPredicted RBP16.26■□□□□ 0.19
GPD1-201ENST00000301149 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
GPD1-201ENST00000301149 PAXIP1Q6ZW49 1069 aaPredicted RBP16.25■□□□□ 0.19
GPD1-201ENST00000301149 MAGI2Q86UL8 1455 aa16.25■□□□□ 0.19
GPD1-201ENST00000301149 CDC42BPBQ9Y5S2 1711 aa16.25■□□□□ 0.19
GPD1-201ENST00000301149 PRAG1Q86YV5 1406 aa16.25■□□□□ 0.19
GPD1-201ENST00000301149 POGKQ9P215 609 aa16.25■□□□□ 0.19
GPD1-201ENST00000301149 AMER1Q5JTC6 1135 aaPredicted RBP16.24■□□□□ 0.19
GPD1-201ENST00000301149 DNAJC5Q9H3Z4 198 aa16.24■□□□□ 0.19
GPD1-201ENST00000301149 FAM135AQ9P2D6 1515 aa16.24■□□□□ 0.19
GPD1-201ENST00000301149 RRP1P56182 461 aaKnown RBP16.23■□□□□ 0.19
GPD1-201ENST00000301149 PRDM4Q9UKN5 801 aa16.23■□□□□ 0.19
GPD1-201ENST00000301149 VIRMAQ69YN4 1812 aaKnown RBP16.22■□□□□ 0.19
GPD1-201ENST00000301149 ZHX1Q9UKY1 873 aaPredicted RBP16.22■□□□□ 0.19
GPD1-201ENST00000301149 SAMD9LQ8IVG5 1584 aa16.22■□□□□ 0.19
GPD1-201ENST00000301149 PLB1Q6P1J6 1458 aa16.21■□□□□ 0.19
GPD1-201ENST00000301149 IQGAP1P46940 1657 aa16.2■□□□□ 0.18
GPD1-201ENST00000301149 CCDC141Q6ZP82 1450 aa16.2■□□□□ 0.18
GPD1-201ENST00000301149 PKD2Q13563 968 aa16.2■□□□□ 0.18
GPD1-201ENST00000301149 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
GPD1-201ENST00000301149 CARMIL2Q6F5E8 1435 aa16.19■□□□□ 0.18
GPD1-201ENST00000301149 NEURL4Q96JN8 1562 aa16.18■□□□□ 0.18
GPD1-201ENST00000301149 BACH2Q9BYV9 841 aa16.17■□□□□ 0.18
GPD1-201ENST00000301149 NAP1L2Q9ULW6 460 aaPredicted RBP16.17■□□□□ 0.18
GPD1-201ENST00000301149 NLRP13Q86W25 1043 aa16.16■□□□□ 0.18
GPD1-201ENST00000301149 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
GPD1-201ENST00000301149 ATP10BO94823 1461 aa16.16■□□□□ 0.18
GPD1-201ENST00000301149 TMC1Q8TDI8 760 aa16.15■□□□□ 0.18
GPD1-201ENST00000301149 PRDM10Q9NQV6 1147 aa16.15■□□□□ 0.18
GPD1-201ENST00000301149 PANK2Q9BZ23 570 aa16.15■□□□□ 0.18
GPD1-201ENST00000301149 KIAA1210Q9ULL0 1709 aa16.14■□□□□ 0.18
GPD1-201ENST00000301149 SYNMO15061 1565 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms