RNA–Protein interactions for RNA: ENST00000301149.7

GPD1-201, Transcript of glycerol-3-phosphate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPD1, Length 3,082 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1-201ENST00000301149 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
GPD1-201ENST00000301149 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
GPD1-201ENST00000301149 PELP1Q8IZL8 1130 aaKnown RBP21.17■□□□□ 0.98
GPD1-201ENST00000301149 ZCCHC6Q5VYS8 1495 aaKnown RBP21.07■□□□□ 0.96
GPD1-201ENST00000301149 PPARGC1BQ86YN6 1023 aaKnown RBP20.95■□□□□ 0.94
GPD1-201ENST00000301149 HRCP23327 699 aa20.88■□□□□ 0.93
GPD1-201ENST00000301149 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
GPD1-201ENST00000301149 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
GPD1-201ENST00000301149 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
GPD1-201ENST00000301149 MYT1Q01538 1121 aa20.46■□□□□ 0.87
GPD1-201ENST00000301149 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
GPD1-201ENST00000301149 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
GPD1-201ENST00000301149 SUPT5HO00267 1087 aaKnown RBP20.26■□□□□ 0.83
GPD1-201ENST00000301149 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
GPD1-201ENST00000301149 ABCC9O60706 1549 aa20■□□□□ 0.79
GPD1-201ENST00000301149 BCL11AQ9H165 835 aa19.65■□□□□ 0.74
GPD1-201ENST00000301149 GTF3C3Q9Y5Q9 886 aa19.65■□□□□ 0.74
GPD1-201ENST00000301149 NEUROD1Q13562 356 aa19.63■□□□□ 0.73
GPD1-201ENST00000301149 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
GPD1-201ENST00000301149 PRKCSHP14314 528 aaPredicted RBP19.57■□□□□ 0.72
GPD1-201ENST00000301149 TRIM26Q12899 539 aaPredicted RBP19.56■□□□□ 0.72
GPD1-201ENST00000301149 FAM9AQ8IZU1 332 aaPredicted RBP19.55■□□□□ 0.72
GPD1-201ENST00000301149 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
GPD1-201ENST00000301149 ACIN1Q9UKV3 1341 aaKnown RBP19.53■□□□□ 0.72
GPD1-201ENST00000301149 ZEB1P37275 1124 aaPredicted RBP19.44■□□□□ 0.7
GPD1-201ENST00000301149 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
GPD1-201ENST00000301149 LOC105371045A0A1W2PR82 267 aa19.36■□□□□ 0.69
GPD1-201ENST00000301149 DCAF8L2P0C7V8 631 aa19.35■□□□□ 0.69
GPD1-201ENST00000301149 NACADO15069 1562 aa19.34■□□□□ 0.69
GPD1-201ENST00000301149 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
GPD1-201ENST00000301149 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
GPD1-201ENST00000301149 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
GPD1-201ENST00000301149 BAZ1AQ9NRL2 1556 aaPredicted RBP19.2■□□□□ 0.66
GPD1-201ENST00000301149 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
GPD1-201ENST00000301149 YTHDC1Q96MU7 727 aaKnown RBP19.07■□□□□ 0.64
GPD1-201ENST00000301149 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
GPD1-201ENST00000301149 WIZO95785 1651 aa19.03■□□□□ 0.64
GPD1-201ENST00000301149 CECR2Q9BXF3 1484 aa18.99■□□□□ 0.63
GPD1-201ENST00000301149 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
GPD1-201ENST00000301149 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
GPD1-201ENST00000301149 TOP2AP11388 1531 aaKnown RBP18.92■□□□□ 0.62
GPD1-201ENST00000301149 ANP32EQ9BTT0 268 aa18.89■□□□□ 0.62
GPD1-201ENST00000301149 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
GPD1-201ENST00000301149 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
GPD1-201ENST00000301149 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
GPD1-201ENST00000301149 EEA1Q15075 1411 aa18.78■□□□□ 0.6
GPD1-201ENST00000301149 UNC13AQ9UPW8 1703 aa18.72■□□□□ 0.59
GPD1-201ENST00000301149 ERICH6Q7L0X2 663 aa18.7■□□□□ 0.58
GPD1-201ENST00000301149 TNIKQ9UKE5 1360 aa18.67■□□□□ 0.58
GPD1-201ENST00000301149 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
GPD1-201ENST00000301149 CCDC88BA6NC98 1476 aa18.63■□□□□ 0.57
GPD1-201ENST00000301149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
GPD1-201ENST00000301149 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
GPD1-201ENST00000301149 KIF21BO75037 1637 aa18.58■□□□□ 0.57
GPD1-201ENST00000301149 ABCC8Q09428 1581 aa18.57■□□□□ 0.56
GPD1-201ENST00000301149 ANO8Q9HCE9 1232 aaPredicted RBP18.53■□□□□ 0.56
GPD1-201ENST00000301149 EHMT2Q96KQ7 1210 aa18.53■□□□□ 0.56
GPD1-201ENST00000301149 APLP2Q06481 763 aa18.52■□□□□ 0.55
GPD1-201ENST00000301149 TSHZ2Q9NRE2 1034 aa18.5■□□□□ 0.55
GPD1-201ENST00000301149 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
GPD1-201ENST00000301149 CCER1Q8TC90 406 aaPredicted RBP18.49■□□□□ 0.55
GPD1-201ENST00000301149 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
GPD1-201ENST00000301149 BAZ1BQ9UIG0 1483 aaKnown RBP18.43■□□□□ 0.54
GPD1-201ENST00000301149 SOGA1O94964 1423 aa18.41■□□□□ 0.54
GPD1-201ENST00000301149 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
GPD1-201ENST00000301149 BICRAQ9NZM4 1560 aa18.37■□□□□ 0.53
GPD1-201ENST00000301149 MIER1Q8N108 512 aa18.33■□□□□ 0.53
GPD1-201ENST00000301149 CCDC136Q96JN2 1154 aa18.32■□□□□ 0.52
GPD1-201ENST00000301149 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
GPD1-201ENST00000301149 SUPT16HQ9Y5B9 1047 aaKnown RBP18.31■□□□□ 0.52
GPD1-201ENST00000301149 RUSC2Q8N2Y8 1516 aa18.29■□□□□ 0.52
GPD1-201ENST00000301149 BCANQ96GW7 911 aa18.28■□□□□ 0.52
GPD1-201ENST00000301149 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
GPD1-201ENST00000301149 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
GPD1-201ENST00000301149 VPS8Q8N3P4 1428 aa18.25■□□□□ 0.51
GPD1-201ENST00000301149 ERICH3Q5RHP9 1530 aa18.22■□□□□ 0.51
GPD1-201ENST00000301149 TOP2BQ02880 1626 aa18.21■□□□□ 0.51
GPD1-201ENST00000301149 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
GPD1-201ENST00000301149 SALL2Q9Y467 1007 aaPredicted RBP18.17■□□□□ 0.5
GPD1-201ENST00000301149 CLIP1P30622 1438 aa18.15■□□□□ 0.5
GPD1-201ENST00000301149 CUX2O14529 1486 aa18.11■□□□□ 0.49
GPD1-201ENST00000301149 ATAD2BQ9ULI0 1458 aa18.1■□□□□ 0.49
GPD1-201ENST00000301149 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
GPD1-201ENST00000301149 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.05■□□□□ 0.48
GPD1-201ENST00000301149 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
GPD1-201ENST00000301149 RAPGEF2Q9Y4G8 1499 aa18.03■□□□□ 0.48
GPD1-201ENST00000301149 RBM19Q9Y4C8 960 aaKnown RBP18■□□□□ 0.47
GPD1-201ENST00000301149 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
GPD1-201ENST00000301149 UBTFP17480 764 aaKnown RBP17.99■□□□□ 0.47
GPD1-201ENST00000301149 RRBP1Q9P2E9 1410 aaKnown RBP17.98■□□□□ 0.47
GPD1-201ENST00000301149 MSH5O43196 834 aa17.98■□□□□ 0.47
GPD1-201ENST00000301149 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
GPD1-201ENST00000301149 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
GPD1-201ENST00000301149 RTN4Q9NQC3 1192 aaKnown RBP17.95■□□□□ 0.46
GPD1-201ENST00000301149 MAP3K1Q13233 1512 aa17.93■□□□□ 0.46
GPD1-201ENST00000301149 ITGAEP38570 1179 aa17.93■□□□□ 0.46
GPD1-201ENST00000301149 DEKP35659 375 aaKnown RBP17.92■□□□□ 0.46
GPD1-201ENST00000301149 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
GPD1-201ENST00000301149 FKBP8Q14318 412 aa17.81■□□□□ 0.44
GPD1-201ENST00000301149 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms