RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 NBR1Q14596 966 aa27.24■■□□□ 1.95
TMED4-201ENST00000289577 SYNJ2O15056 1496 aa27.23■■□□□ 1.95
TMED4-201ENST00000289577 PARD3Q8TEW0 1356 aa27.23■■□□□ 1.95
TMED4-201ENST00000289577 ABCA8O94911 1581 aa27.23■■□□□ 1.95
TMED4-201ENST00000289577 ZBTB47Q9UFB7 747 aaPredicted RBP27.22■■□□□ 1.95
TMED4-201ENST00000289577 KDM2AQ9Y2K7 1162 aa27.22■■□□□ 1.95
TMED4-201ENST00000289577 ARHGEF5Q12774 1597 aa27.22■■□□□ 1.95
TMED4-201ENST00000289577 DCAF11Q8TEB1 546 aa27.22■■□□□ 1.95
TMED4-201ENST00000289577 PDE3BQ13370 1112 aa27.21■■□□□ 1.95
TMED4-201ENST00000289577 PLEKHD1A6NEE1 506 aa27.21■■□□□ 1.95
TMED4-201ENST00000289577 NLRP13Q86W25 1043 aa27.21■■□□□ 1.95
TMED4-201ENST00000289577 RCAN3Q9UKA8 241 aa27.21■■□□□ 1.95
TMED4-201ENST00000289577 TRPM1Q7Z4N2 1603 aa27.19■■□□□ 1.94
TMED4-201ENST00000289577 TSPY4P0CV99 314 aa27.19■■□□□ 1.94
TMED4-201ENST00000289577 TSPY10P0CW01 314 aa27.19■■□□□ 1.94
TMED4-201ENST00000289577 EXOC6Q8TAG9 804 aa27.19■■□□□ 1.94
TMED4-201ENST00000289577 TCERG1O14776 1098 aaKnown RBP27.18■■□□□ 1.94
TMED4-201ENST00000289577 ATP10BO94823 1461 aa27.18■■□□□ 1.94
TMED4-201ENST00000289577 NUP160Q12769 1436 aa27.18■■□□□ 1.94
TMED4-201ENST00000289577 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
TMED4-201ENST00000289577 PRAG1Q86YV5 1406 aa27.16■■□□□ 1.94
TMED4-201ENST00000289577 JPH4Q96JJ6 628 aa27.16■■□□□ 1.94
TMED4-201ENST00000289577 INSRP06213 1382 aa27.15■■□□□ 1.94
TMED4-201ENST00000289577 FAM135AQ9P2D6 1515 aa27.14■■□□□ 1.94
TMED4-201ENST00000289577 PER1O15534 1290 aaPredicted RBP27.14■■□□□ 1.94
TMED4-201ENST00000289577 ZMYM4Q5VZL5 1548 aa27.12■■□□□ 1.93
TMED4-201ENST00000289577 GPRASP1Q5JY77 1395 aa27.12■■□□□ 1.93
TMED4-201ENST00000289577 WASHC2CQ9Y4E1 1318 aa27.1■■□□□ 1.93
TMED4-201ENST00000289577 MS4A1P11836 297 aa27.1■■□□□ 1.93
TMED4-201ENST00000289577 LAMC1P11047 1609 aa27.1■■□□□ 1.93
TMED4-201ENST00000289577 HNRNPMP52272 730 aaKnown RBP eCLIP27.08■■□□□ 1.93
TMED4-201ENST00000289577 COL17A1Q9UMD9 1497 aaPredicted RBP27.08■■□□□ 1.92
TMED4-201ENST00000289577 BLMP54132 1417 aaPredicted RBP27.07■■□□□ 1.92
TMED4-201ENST00000289577 CCDC141Q6ZP82 1450 aa27.07■■□□□ 1.92
TMED4-201ENST00000289577 PDE4AP27815 886 aa27.06■■□□□ 1.92
TMED4-201ENST00000289577 RTL5Q5HYW3 569 aaPredicted RBP27.06■■□□□ 1.92
TMED4-201ENST00000289577 CCDC144AA2RUR9 1427 aa27.06■■□□□ 1.92
TMED4-201ENST00000289577 BACH2Q9BYV9 841 aa27.05■■□□□ 1.92
TMED4-201ENST00000289577 SAMD9LQ8IVG5 1584 aa27.04■■□□□ 1.92
TMED4-201ENST00000289577 PRDM15P57071 1507 aaPredicted RBP27.04■■□□□ 1.92
TMED4-201ENST00000289577 SALL2Q9Y467 1007 aaPredicted RBP27.03■■□□□ 1.92
TMED4-201ENST00000289577 PLA2R1Q13018 1463 aa27.02■■□□□ 1.92
TMED4-201ENST00000289577 NBPF1Q3BBV0 1214 aa27.02■■□□□ 1.92
TMED4-201ENST00000289577 CDCA7LQ96GN5 454 aa27.02■■□□□ 1.92
TMED4-201ENST00000289577 UNC13BO14795 1591 aa27.01■■□□□ 1.91
TMED4-201ENST00000289577 A2MP01023 1474 aa27.01■■□□□ 1.91
TMED4-201ENST00000289577 RSPH4AQ5TD94 716 aa27.01■■□□□ 1.91
TMED4-201ENST00000289577 TESK2Q96S53 571 aa27■■□□□ 1.91
TMED4-201ENST00000289577 CDC42BPBQ9Y5S2 1711 aa27■■□□□ 1.91
TMED4-201ENST00000289577 PREX2Q70Z35 1606 aa27■■□□□ 1.91
TMED4-201ENST00000289577 FBLN2P98095 1184 aa26.98■■□□□ 1.91
TMED4-201ENST00000289577 PLEKHH2Q8IVE3 1493 aa26.98■■□□□ 1.91
TMED4-201ENST00000289577 DISP3Q9P2K9 1392 aa26.98■■□□□ 1.91
TMED4-201ENST00000289577 MAST1Q9Y2H9 1570 aa26.97■■□□□ 1.91
TMED4-201ENST00000289577 NPM2Q86SE8 214 aaKnown RBP26.96■■□□□ 1.91
TMED4-201ENST00000289577 EIF2AK4Q9P2K8 1649 aaKnown RBP26.95■■□□□ 1.9
TMED4-201ENST00000289577 ERBINQ96RT1 1412 aa26.94■■□□□ 1.9
TMED4-201ENST00000289577 RGL3Q3MIN7 710 aa26.92■■□□□ 1.9
TMED4-201ENST00000289577 CC2D1BQ5T0F9 858 aaKnown RBP26.92■■□□□ 1.9
TMED4-201ENST00000289577 PANK3Q9H999 370 aa26.92■■□□□ 1.9
TMED4-201ENST00000289577 MYO5CQ9NQX4 1742 aa26.92■■□□□ 1.9
TMED4-201ENST00000289577 IQGAP3Q86VI3 1631 aa26.91■■□□□ 1.9
TMED4-201ENST00000289577 USP35Q9P2H5 1018 aa26.9■■□□□ 1.9
TMED4-201ENST00000289577 PLIN1O60240 522 aa26.89■■□□□ 1.9
TMED4-201ENST00000289577 CRBNQ96SW2 442 aa26.89■■□□□ 1.9
TMED4-201ENST00000289577 ATP10AO60312 1499 aa26.89■■□□□ 1.9
TMED4-201ENST00000289577 SYCP2Q9BX26 1530 aa26.87■■□□□ 1.89
TMED4-201ENST00000289577 TMF1P82094 1093 aa26.86■■□□□ 1.89
TMED4-201ENST00000289577 PLXNC1O60486 1568 aa26.85■■□□□ 1.89
TMED4-201ENST00000289577 RNF17Q9BXT8 1623 aaKnown RBP26.85■■□□□ 1.89
TMED4-201ENST00000289577 ERCC6Q03468 1493 aa26.85■■□□□ 1.89
TMED4-201ENST00000289577 PPM1GO15355 546 aaPredicted RBP26.82■■□□□ 1.88
TMED4-201ENST00000289577 MAGI2Q86UL8 1455 aa26.81■■□□□ 1.88
TMED4-201ENST00000289577 KDM2BQ8NHM5 1336 aa26.8■■□□□ 1.88
TMED4-201ENST00000289577 NEFMP07197 916 aa26.8■■□□□ 1.88
TMED4-201ENST00000289577 LAS1LQ9Y4W2 734 aaKnown RBP26.8■■□□□ 1.88
TMED4-201ENST00000289577 DDRGK1Q96HY6 314 aa26.8■■□□□ 1.88
TMED4-201ENST00000289577 ADAMTS8Q9UP79 889 aa26.78■■□□□ 1.88
TMED4-201ENST00000289577 WDR7Q9Y4E6 1490 aa26.78■■□□□ 1.88
TMED4-201ENST00000289577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.78■■□□□ 1.884e-8■□□□□ 8.8
TMED4-201ENST00000289577 TTC37Q6PGP7 1564 aa26.78■■□□□ 1.88
TMED4-201ENST00000289577 ARHGAP5Q13017 1502 aa26.77■■□□□ 1.88
TMED4-201ENST00000289577 C20orf194Q5TEA3 1177 aa26.76■■□□□ 1.87
TMED4-201ENST00000289577 DUOX2Q9NRD8 1548 aa26.76■■□□□ 1.87
TMED4-201ENST00000289577 SKAP1Q86WV1 359 aa26.75■■□□□ 1.87
TMED4-201ENST00000289577 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.74■■□□□ 1.872e-7■■■■□ 26.2
TMED4-201ENST00000289577 ZNF521Q96K83 1311 aa26.74■■□□□ 1.87
TMED4-201ENST00000289577 PLEKHH1Q9ULM0 1364 aa26.73■■□□□ 1.87
TMED4-201ENST00000289577 DUSP27Q5VZP5 1158 aa26.73■■□□□ 1.87
TMED4-201ENST00000289577 CLASP1Q7Z460 1538 aa26.72■■□□□ 1.87
TMED4-201ENST00000289577 PPP2R1AP30153 589 aa26.72■■□□□ 1.87
TMED4-201ENST00000289577 CENPQQ7L2Z9 268 aaPredicted RBP26.72■■□□□ 1.87
TMED4-201ENST00000289577 IQGAP1P46940 1657 aa26.72■■□□□ 1.87
TMED4-201ENST00000289577 MADDQ8WXG6 1647 aa26.69■■□□□ 1.86
TMED4-201ENST00000289577 AMER1Q5JTC6 1135 aaPredicted RBP26.69■■□□□ 1.86
TMED4-201ENST00000289577 SYNMO15061 1565 aa26.68■■□□□ 1.86
TMED4-201ENST00000289577 KNSTRNQ9Y448 316 aa26.67■■□□□ 1.86
TMED4-201ENST00000289577 WDR43Q15061 677 aaKnown RBP eCLIP26.66■■□□□ 1.86
TMED4-201ENST00000289577 GOLGA2Q08379 1002 aa26.65■■□□□ 1.86
TMED4-201ENST00000289577 PIK3C2GO75747 1445 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms