RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 RGL3Q3MIN7 710 aa23.26■■□□□ 1.31
TRAM1-201ENST00000262213 ADGRL2O95490 1459 aa23.26■■□□□ 1.31
TRAM1-201ENST00000262213 UHRF1BP1Q6BDS2 1440 aa23.26■■□□□ 1.31
TRAM1-201ENST00000262213 PLIN1O60240 522 aa23.25■■□□□ 1.31
TRAM1-201ENST00000262213 CHMP7Q8WUX9 453 aaPredicted RBP23.25■■□□□ 1.31
TRAM1-201ENST00000262213 TSPY4P0CV99 314 aa23.24■■□□□ 1.31
TRAM1-201ENST00000262213 TSPY10P0CW01 314 aa23.24■■□□□ 1.31
TRAM1-201ENST00000262213 SKAP1Q86WV1 359 aa23.24■■□□□ 1.31
TRAM1-201ENST00000262213 NUP160Q12769 1436 aa23.24■■□□□ 1.31
TRAM1-201ENST00000262213 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
TRAM1-201ENST00000262213 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
TRAM1-201ENST00000262213 CROCC2H7BZ55 1655 aa23.23■■□□□ 1.31
TRAM1-201ENST00000262213 PDE4AP27815 886 aa23.23■■□□□ 1.31
TRAM1-201ENST00000262213 C9orf84Q5VXU9 1444 aa23.22■■□□□ 1.31
TRAM1-201ENST00000262213 PLEKHD1A6NEE1 506 aa23.22■■□□□ 1.31
TRAM1-201ENST00000262213 NLRP13Q86W25 1043 aa23.21■■□□□ 1.31
TRAM1-201ENST00000262213 KTN1Q86UP2 1357 aaKnown RBP23.2■■□□□ 1.3
TRAM1-201ENST00000262213 TCERG1O14776 1098 aaKnown RBP23.2■■□□□ 1.3
TRAM1-201ENST00000262213 NBPF1Q3BBV0 1214 aa23.19■■□□□ 1.3
TRAM1-201ENST00000262213 ARHGEF12Q9NZN5 1544 aa23.15■■□□□ 1.3
TRAM1-201ENST00000262213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.15■■□□□ 1.33e-7■■□□□ 12.8
TRAM1-201ENST00000262213 NEFMP07197 916 aa23.13■■□□□ 1.29
TRAM1-201ENST00000262213 BACH2Q9BYV9 841 aa23.13■■□□□ 1.29
TRAM1-201ENST00000262213 JPH4Q96JJ6 628 aa23.13■■□□□ 1.29
TRAM1-201ENST00000262213 CRBNQ96SW2 442 aa23.12■■□□□ 1.29
TRAM1-201ENST00000262213 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
TRAM1-201ENST00000262213 PDE3BQ13370 1112 aa23.11■■□□□ 1.29
TRAM1-201ENST00000262213 PARD3Q8TEW0 1356 aa23.11■■□□□ 1.29
TRAM1-201ENST00000262213 ADCY10Q96PN6 1610 aa23.1■■□□□ 1.29
TRAM1-201ENST00000262213 CHD1O14646 1710 aa23.1■■□□□ 1.29
TRAM1-201ENST00000262213 E9PCH4 1651 aa23.09■■□□□ 1.29
TRAM1-201ENST00000262213 PER1O15534 1290 aaPredicted RBP23.08■■□□□ 1.29
TRAM1-201ENST00000262213 CARMIL2Q6F5E8 1435 aa23.08■■□□□ 1.29
TRAM1-201ENST00000262213 PANK3Q9H999 370 aa23.08■■□□□ 1.29
TRAM1-201ENST00000262213 CCDC144AA2RUR9 1427 aa23.05■■□□□ 1.28
TRAM1-201ENST00000262213 RTN4Q9NQC3 1192 aaKnown RBP23.05■■□□□ 1.28
TRAM1-201ENST00000262213 DISP3Q9P2K9 1392 aa23.05■■□□□ 1.28
TRAM1-201ENST00000262213 MS4A1P11836 297 aa23.04■■□□□ 1.28
TRAM1-201ENST00000262213 C20orf194Q5TEA3 1177 aa23.04■■□□□ 1.28
TRAM1-201ENST00000262213 PRAG1Q86YV5 1406 aa23.04■■□□□ 1.28
TRAM1-201ENST00000262213 IL27Q8NEV9 243 aa23.04■■□□□ 1.28
TRAM1-201ENST00000262213 SHANK2Q9UPX8 1470 aa23.04■■□□□ 1.28
TRAM1-201ENST00000262213 ABCC10Q5T3U5 1492 aa23.03■■□□□ 1.28
TRAM1-201ENST00000262213 KDM5DQ9BY66 1539 aa23.03■■□□□ 1.28
TRAM1-201ENST00000262213 ATP10BO94823 1461 aa23.02■■□□□ 1.28
TRAM1-201ENST00000262213 FAM135AQ9P2D6 1515 aa23.01■■□□□ 1.27
TRAM1-201ENST00000262213 SLC4A3P48751 1232 aa23■■□□□ 1.27
TRAM1-201ENST00000262213 PTPRGP23470 1445 aa22.99■■□□□ 1.27
TRAM1-201ENST00000262213 TESK2Q96S53 571 aa22.98■■□□□ 1.27
TRAM1-201ENST00000262213 TRPM1Q7Z4N2 1603 aa22.98■■□□□ 1.27
TRAM1-201ENST00000262213 ADAMTS8Q9UP79 889 aa22.98■■□□□ 1.27
TRAM1-201ENST00000262213 TMF1P82094 1093 aa22.95■■□□□ 1.26
TRAM1-201ENST00000262213 COL17A1Q9UMD9 1497 aaPredicted RBP22.94■■□□□ 1.26
TRAM1-201ENST00000262213 ERBINQ96RT1 1412 aa22.94■■□□□ 1.26
TRAM1-201ENST00000262213 A2MP01023 1474 aa22.93■■□□□ 1.26
TRAM1-201ENST00000262213 PPM1GO15355 546 aaPredicted RBP22.93■■□□□ 1.26
TRAM1-201ENST00000262213 BLMP54132 1417 aaPredicted RBP22.93■■□□□ 1.26
TRAM1-201ENST00000262213 ABCA8O94911 1581 aa22.92■■□□□ 1.26
TRAM1-201ENST00000262213 SHROOM2Q13796 1616 aa22.92■■□□□ 1.26
TRAM1-201ENST00000262213 CCDC141Q6ZP82 1450 aa22.91■■□□□ 1.26
TRAM1-201ENST00000262213 WDR43Q15061 677 aaKnown RBP eCLIP22.9■■□□□ 1.26
TRAM1-201ENST00000262213 PLA2R1Q13018 1463 aa22.9■■□□□ 1.26
TRAM1-201ENST00000262213 DDRGK1Q96HY6 314 aa22.9■■□□□ 1.26
TRAM1-201ENST00000262213 USP35Q9P2H5 1018 aa22.89■■□□□ 1.25
TRAM1-201ENST00000262213 DAXXQ9UER7 740 aaPredicted RBP22.89■■□□□ 1.25
TRAM1-201ENST00000262213 WASHC2CQ9Y4E1 1318 aa22.88■■□□□ 1.25
TRAM1-201ENST00000262213 ANO8Q9HCE9 1232 aaPredicted RBP22.88■■□□□ 1.25
TRAM1-201ENST00000262213 SAMD9LQ8IVG5 1584 aa22.87■■□□□ 1.25
TRAM1-201ENST00000262213 GPRASP1Q5JY77 1395 aa22.87■■□□□ 1.25
TRAM1-201ENST00000262213 RGS3P49796 1198 aa22.87■■□□□ 1.25
TRAM1-201ENST00000262213 KNSTRNQ9Y448 316 aa22.87■■□□□ 1.25
TRAM1-201ENST00000262213 ARHGEF5Q12774 1597 aa22.86■■□□□ 1.25
TRAM1-201ENST00000262213 PLEKHH1Q9ULM0 1364 aa22.86■■□□□ 1.25
TRAM1-201ENST00000262213 ZMYM4Q5VZL5 1548 aa22.86■■□□□ 1.25
TRAM1-201ENST00000262213 PPP2R1AP30153 589 aa22.84■■□□□ 1.25
TRAM1-201ENST00000262213 CCDC146Q8IYE0 955 aa22.84■■□□□ 1.25
TRAM1-201ENST00000262213 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
TRAM1-201ENST00000262213 PRDM15P57071 1507 aaPredicted RBP22.83■■□□□ 1.25
TRAM1-201ENST00000262213 DUSP27Q5VZP5 1158 aa22.83■■□□□ 1.25
TRAM1-201ENST00000262213 SYCP2Q9BX26 1530 aa22.83■■□□□ 1.24
TRAM1-201ENST00000262213 KDM2BQ8NHM5 1336 aa22.82■■□□□ 1.24
TRAM1-201ENST00000262213 PLEKHH2Q8IVE3 1493 aa22.82■■□□□ 1.24
TRAM1-201ENST00000262213 CDC42BPBQ9Y5S2 1711 aa22.81■■□□□ 1.24
TRAM1-201ENST00000262213 NFKBIBQ15653 356 aa22.81■■□□□ 1.24
TRAM1-201ENST00000262213 CENPQQ7L2Z9 268 aaPredicted RBP22.81■■□□□ 1.24
TRAM1-201ENST00000262213 GOLGA2Q08379 1002 aa22.8■■□□□ 1.24
TRAM1-201ENST00000262213 MYO5CQ9NQX4 1742 aa22.8■■□□□ 1.24
TRAM1-201ENST00000262213 RSPH4AQ5TD94 716 aa22.79■■□□□ 1.24
TRAM1-201ENST00000262213 ARHGAP5Q13017 1502 aa22.78■■□□□ 1.24
TRAM1-201ENST00000262213 MAGI2Q86UL8 1455 aa22.78■■□□□ 1.24
TRAM1-201ENST00000262213 FAM161AQ3B820 660 aa22.77■■□□□ 1.24
TRAM1-201ENST00000262213 BRPF3Q9ULD4 1205 aa22.77■■□□□ 1.24
TRAM1-201ENST00000262213 C8orf34Q49A92 452 aa22.75■■□□□ 1.23
TRAM1-201ENST00000262213 GSE1Q14687 1217 aa22.75■■□□□ 1.23
TRAM1-201ENST00000262213 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.75■■□□□ 1.23
TRAM1-201ENST00000262213 ERCC6L2Q5T890 1561 aa22.74■■□□□ 1.23
TRAM1-201ENST00000262213 PREX2Q70Z35 1606 aa22.74■■□□□ 1.23
TRAM1-201ENST00000262213 INSRP06213 1382 aa22.74■■□□□ 1.23
TRAM1-201ENST00000262213 AMER1Q5JTC6 1135 aaPredicted RBP22.73■■□□□ 1.23
TRAM1-201ENST00000262213 SPINK5Q9NQ38 1064 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms